
PMC:2664230 / 271-445
Annnotations
bionlp-st-ge-2016-reference
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T58 | 23-50 | Protein | denotes | tumor necrosis factor-alpha |
T59 | 52-57 | Protein | denotes | TNF-α |
T60 | 59-69 | Gene_expression | denotes | production |
T61 | 152-162 | Gene_expression | denotes | production |
T62 | 166-171 | Protein | denotes | TNF-α |
R750 | T58 | T60 | themeOf | tumor necrosis factor-alpha,production |
R753 | T62 | T61 | themeOf | TNF-α,production |
pmc-enju-pas
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T486 | 1-7 | NN | denotes | factor |
T487 | 8-18 | NN | denotes | activation |
T488 | 19-22 | CC | denotes | and |
T489 | 23-28 | NN | denotes | tumor |
T490 | 29-37 | NN | denotes | necrosis |
T491 | 38-50 | NN | denotes | factor-alpha |
T492 | 51-52 | -LRB- | denotes | ( |
T493 | 52-57 | NN | denotes | TNF-α |
T494 | 57-58 | -RRB- | denotes | ) |
T495 | 59-69 | NN | denotes | production |
T496 | 70-72 | IN | denotes | in |
T497 | 73-91 | NN | denotes | lipopolysaccharide |
T498 | 92-93 | -LRB- | denotes | ( |
T499 | 93-96 | NN | denotes | LPS |
T500 | 96-97 | -RRB- | denotes | ) |
T501 | 97-108 | JJ | denotes | -stimulated |
T502 | 109-114 | JJ | denotes | human |
T503 | 115-126 | JJ | denotes | mononuclear |
T504 | 127-132 | NN | denotes | cells |
T505 | 135-147 | NN | denotes | INTRODUCTION |
T506 | 148-151 | DT | denotes | The |
T507 | 152-162 | NN | denotes | production |
T508 | 163-165 | IN | denotes | of |
T509 | 166-171 | NN | denotes | TNF-α |
R380 | T487 | T486 | arg1Of | activation,factor |
R381 | T487 | T488 | arg1Of | activation,and |
R383 | T488 | T496 | arg1Of | and,in |
R384 | T491 | T489 | arg1Of | factor-alpha,tumor |
R385 | T491 | T490 | arg1Of | factor-alpha,necrosis |
R386 | T491 | T492 | arg1Of | factor-alpha,( |
R387 | T493 | T492 | arg2Of | TNF-α,( |
R388 | T494 | T492 | arg3Of | ),( |
R389 | T495 | T488 | arg2Of | production,and |
R390 | T495 | T491 | arg1Of | production,factor-alpha |
R391 | T499 | T498 | arg2Of | LPS,( |
R392 | T500 | T498 | arg3Of | ),( |
R393 | T501 | T497 | arg1Of | -stimulated,lipopolysaccharide |
R394 | T501 | T498 | arg1Of | -stimulated,( |
R395 | T504 | T496 | arg2Of | cells,in |
R396 | T504 | T501 | arg1Of | cells,-stimulated |
R397 | T504 | T502 | arg1Of | cells,human |
R398 | T504 | T503 | arg1Of | cells,mononuclear |
R399 | T507 | T506 | arg1Of | production,The |
R400 | T507 | T508 | arg1Of | production,of |
R403 | T509 | T508 | arg2Of | TNF-α,of |
bionlp-st-ge-2016-spacy-parsed
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T165 | 1-7 | NN | denotes | factor |
T166 | 8-18 | NN | denotes | activation |
T167 | 19-22 | CC | denotes | and |
T168 | 23-28 | NN | denotes | tumor |
T169 | 29-37 | NN | denotes | necrosis |
T170 | 38-50 | NN | denotes | factor-alpha |
T171 | 51-52 | -LRB- | denotes | ( |
T172 | 52-57 | NNP | denotes | TNF-α |
T173 | 57-58 | -RRB- | denotes | ) |
T174 | 59-69 | NN | denotes | production |
T175 | 70-72 | IN | denotes | in |
T176 | 73-91 | NN | denotes | lipopolysaccharide |
T177 | 92-93 | -LRB- | denotes | ( |
T178 | 93-96 | NNP | denotes | LPS |
T179 | 96-97 | -RRB- | denotes | ) |
T180 | 97-98 | : | denotes | - |
T181 | 98-108 | VBN | denotes | stimulated |
T182 | 109-114 | JJ | denotes | human |
T183 | 115-126 | NN | denotes | mononuclear |
T184 | 127-132 | NNS | denotes | cells |
T185 | 132-133 | . | denotes | . |
T186 | 135-147 | NNP | denotes | INTRODUCTION |
T187 | 148-151 | DT | denotes | The |
T188 | 152-162 | NN | denotes | production |
T189 | 163-165 | IN | denotes | of |
T190 | 166-171 | NNP | denotes | TNF-α |
R80 | T182 | T184 | amod | human,cells |
R81 | T183 | T184 | compound | mononuclear,cells |
R82 | T184 | T181 | dobj | cells,stimulated |
R85 | T187 | T188 | det | The,production |
R87 | T189 | T188 | prep | of,production |
R88 | T190 | T189 | pobj | TNF-α,of |
R63 | T165 | T166 | compound | factor,activation |
R65 | T167 | T166 | cc | and,activation |
R66 | T168 | T169 | compound | tumor,necrosis |
R67 | T169 | T170 | compound | necrosis,factor-alpha |
R68 | T170 | T166 | conj | factor-alpha,activation |
R69 | T171 | T172 | punct | (,TNF-α |
R70 | T172 | T170 | appos | TNF-α,factor-alpha |
R71 | T173 | T170 | punct | ),factor-alpha |
R72 | T174 | T166 | conj | production,activation |
R73 | T175 | T174 | prep | in,production |
R74 | T176 | T175 | pobj | lipopolysaccharide,in |
R75 | T177 | T178 | punct | (,LPS |
R76 | T178 | T176 | appos | LPS,lipopolysaccharide |
R77 | T179 | T176 | punct | ),lipopolysaccharide |
GO-BP
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T826 | 52-69 | http://purl.obolibrary.org/obo/GO_0032680 | denotes | TNF-α) production |
T827 | 152-171 | http://purl.obolibrary.org/obo/GO_0032680 | denotes | production of TNF-α |
T834 | 52-69 | http://purl.obolibrary.org/obo/GO_0032640 | denotes | TNF-α) production |
T835 | 152-171 | http://purl.obolibrary.org/obo/GO_0032640 | denotes | production of TNF-α |
T836 | 152-169 | http://purl.obolibrary.org/obo/GO_0032640 | denotes | production of TNF |
T852 | 29-37 | http://purl.obolibrary.org/obo/GO_0001906 | denotes | necrosis |
T853 | 29-37 | http://purl.obolibrary.org/obo/GO_0008219 | denotes | necrosis |
T854 | 29-37 | http://purl.obolibrary.org/obo/GO_0019835 | denotes | necrosis |
T855 | 29-37 | http://purl.obolibrary.org/obo/GO_0070265 | denotes | necrosis |
GO-CC
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T881 | 127-132 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T114 | 135-147 | Sentence | denotes | INTRODUCTION |
T6 | 135-147 | Sentence | denotes | INTRODUCTION |
events-check-again
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T888 | 23-50 | Protein | denotes | tumor necrosis factor-alpha |
T889 | 52-57 | Protein | denotes | TNF-α |
T890 | 59-69 | Gene_expression | denotes | production |
T891 | 152-162 | Gene_expression | denotes | production |
T892 | 166-171 | Protein | denotes | TNF-α |
R650 | T888 | T890 | themeOf | tumor necrosis factor-alpha,production |
R653 | T892 | T891 | themeOf | TNF-α,production |
bionlp-st-ge-2016-reference-tees
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T919 | 23-50 | Protein | denotes | tumor necrosis factor-alpha |
T920 | 52-57 | Protein | denotes | TNF-α |
T921 | 59-69 | Gene_expression | denotes | production |
T922 | 59-69 | Gene_expression | denotes | production |
T923 | 8-18 | Positive_regulation | denotes | activation |
T924 | 8-18 | Positive_regulation | denotes | activation |
T927 | 166-171 | Protein | denotes | TNF-α |
T928 | 152-162 | Gene_expression | denotes | production |
R669 | T919 | T921 | themeOf | tumor necrosis factor-alpha,production |
R670 | T920 | T922 | themeOf | TNF-α,production |
R671 | T921 | T923 | themeOf | production,activation |
R672 | T922 | T924 | themeOf | production,activation |
R675 | T927 | T928 | themeOf | TNF-α,production |
bionlp-st-ge-2016-uniprot
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T759 | 23-44 | P01375 | denotes | tumor necrosis factor |
T760 | 52-55 | P01375 | denotes | TNF |
T761 | 52-57 | P01375 | denotes | TNF-α |
T762 | 166-169 | P01375 | denotes | TNF |
T763 | 166-171 | P01375 | denotes | TNF-α |
test2
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T32 | 23-50 | Protein | denotes | tumor necrosis factor-alpha |
T33 | 52-57 | Protein | denotes | TNF-α |
T34 | 59-69 | Gene_expression | denotes | production |
T35 | 152-162 | Gene_expression | denotes | production |
T36 | 166-171 | Protein | denotes | TNF-α |
R20 | T32 | T34 | themeOf | tumor necrosis factor-alpha,production |
R22 | T36 | T35 | themeOf | TNF-α,production |