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PMC:2664230 / 271-445 JSONTXT

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bionlp-st-ge-2016-reference

Id Subject Object Predicate Lexical cue
T58 23-50 Protein denotes tumor necrosis factor-alpha
T59 52-57 Protein denotes TNF-α
T60 59-69 Gene_expression denotes production
T61 152-162 Gene_expression denotes production
T62 166-171 Protein denotes TNF-α
R750 T58 T60 themeOf tumor necrosis factor-alpha,production
R753 T62 T61 themeOf TNF-α,production

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T486 1-7 NN denotes factor
T487 8-18 NN denotes activation
T488 19-22 CC denotes and
T489 23-28 NN denotes tumor
T490 29-37 NN denotes necrosis
T491 38-50 NN denotes factor-alpha
T492 51-52 -LRB- denotes (
T493 52-57 NN denotes TNF-α
T494 57-58 -RRB- denotes )
T495 59-69 NN denotes production
T496 70-72 IN denotes in
T497 73-91 NN denotes lipopolysaccharide
T498 92-93 -LRB- denotes (
T499 93-96 NN denotes LPS
T500 96-97 -RRB- denotes )
T501 97-108 JJ denotes -stimulated
T502 109-114 JJ denotes human
T503 115-126 JJ denotes mononuclear
T504 127-132 NN denotes cells
T505 135-147 NN denotes INTRODUCTION
T506 148-151 DT denotes The
T507 152-162 NN denotes production
T508 163-165 IN denotes of
T509 166-171 NN denotes TNF-α
R380 T487 T486 arg1Of activation,factor
R381 T487 T488 arg1Of activation,and
R383 T488 T496 arg1Of and,in
R384 T491 T489 arg1Of factor-alpha,tumor
R385 T491 T490 arg1Of factor-alpha,necrosis
R386 T491 T492 arg1Of factor-alpha,(
R387 T493 T492 arg2Of TNF-α,(
R388 T494 T492 arg3Of ),(
R389 T495 T488 arg2Of production,and
R390 T495 T491 arg1Of production,factor-alpha
R391 T499 T498 arg2Of LPS,(
R392 T500 T498 arg3Of ),(
R393 T501 T497 arg1Of -stimulated,lipopolysaccharide
R394 T501 T498 arg1Of -stimulated,(
R395 T504 T496 arg2Of cells,in
R396 T504 T501 arg1Of cells,-stimulated
R397 T504 T502 arg1Of cells,human
R398 T504 T503 arg1Of cells,mononuclear
R399 T507 T506 arg1Of production,The
R400 T507 T508 arg1Of production,of
R403 T509 T508 arg2Of TNF-α,of

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T165 1-7 NN denotes factor
T166 8-18 NN denotes activation
T167 19-22 CC denotes and
T168 23-28 NN denotes tumor
T169 29-37 NN denotes necrosis
T170 38-50 NN denotes factor-alpha
T171 51-52 -LRB- denotes (
T172 52-57 NNP denotes TNF-α
T173 57-58 -RRB- denotes )
T174 59-69 NN denotes production
T175 70-72 IN denotes in
T176 73-91 NN denotes lipopolysaccharide
T177 92-93 -LRB- denotes (
T178 93-96 NNP denotes LPS
T179 96-97 -RRB- denotes )
T180 97-98 : denotes -
T181 98-108 VBN denotes stimulated
T182 109-114 JJ denotes human
T183 115-126 NN denotes mononuclear
T184 127-132 NNS denotes cells
T185 132-133 . denotes .
T186 135-147 NNP denotes INTRODUCTION
T187 148-151 DT denotes The
T188 152-162 NN denotes production
T189 163-165 IN denotes of
T190 166-171 NNP denotes TNF-α
R80 T182 T184 amod human,cells
R81 T183 T184 compound mononuclear,cells
R82 T184 T181 dobj cells,stimulated
R85 T187 T188 det The,production
R87 T189 T188 prep of,production
R88 T190 T189 pobj TNF-α,of
R63 T165 T166 compound factor,activation
R65 T167 T166 cc and,activation
R66 T168 T169 compound tumor,necrosis
R67 T169 T170 compound necrosis,factor-alpha
R68 T170 T166 conj factor-alpha,activation
R69 T171 T172 punct (,TNF-α
R70 T172 T170 appos TNF-α,factor-alpha
R71 T173 T170 punct ),factor-alpha
R72 T174 T166 conj production,activation
R73 T175 T174 prep in,production
R74 T176 T175 pobj lipopolysaccharide,in
R75 T177 T178 punct (,LPS
R76 T178 T176 appos LPS,lipopolysaccharide
R77 T179 T176 punct ),lipopolysaccharide

GO-BP

Id Subject Object Predicate Lexical cue
T826 52-69 http://purl.obolibrary.org/obo/GO_0032680 denotes TNF-α) production
T827 152-171 http://purl.obolibrary.org/obo/GO_0032680 denotes production of TNF-α
T834 52-69 http://purl.obolibrary.org/obo/GO_0032640 denotes TNF-α) production
T835 152-171 http://purl.obolibrary.org/obo/GO_0032640 denotes production of TNF-α
T836 152-169 http://purl.obolibrary.org/obo/GO_0032640 denotes production of TNF
T852 29-37 http://purl.obolibrary.org/obo/GO_0001906 denotes necrosis
T853 29-37 http://purl.obolibrary.org/obo/GO_0008219 denotes necrosis
T854 29-37 http://purl.obolibrary.org/obo/GO_0019835 denotes necrosis
T855 29-37 http://purl.obolibrary.org/obo/GO_0070265 denotes necrosis

GO-CC

Id Subject Object Predicate Lexical cue
T881 127-132 http://purl.obolibrary.org/obo/GO_0005623 denotes cells

sentences

Id Subject Object Predicate Lexical cue
T114 135-147 Sentence denotes INTRODUCTION
T6 135-147 Sentence denotes INTRODUCTION

events-check-again

Id Subject Object Predicate Lexical cue
T888 23-50 Protein denotes tumor necrosis factor-alpha
T889 52-57 Protein denotes TNF-α
T890 59-69 Gene_expression denotes production
T891 152-162 Gene_expression denotes production
T892 166-171 Protein denotes TNF-α
R650 T888 T890 themeOf tumor necrosis factor-alpha,production
R653 T892 T891 themeOf TNF-α,production

bionlp-st-ge-2016-reference-tees

Id Subject Object Predicate Lexical cue
T919 23-50 Protein denotes tumor necrosis factor-alpha
T920 52-57 Protein denotes TNF-α
T921 59-69 Gene_expression denotes production
T922 59-69 Gene_expression denotes production
T923 8-18 Positive_regulation denotes activation
T924 8-18 Positive_regulation denotes activation
T927 166-171 Protein denotes TNF-α
T928 152-162 Gene_expression denotes production
R669 T919 T921 themeOf tumor necrosis factor-alpha,production
R670 T920 T922 themeOf TNF-α,production
R671 T921 T923 themeOf production,activation
R672 T922 T924 themeOf production,activation
R675 T927 T928 themeOf TNF-α,production

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T759 23-44 P01375 denotes tumor necrosis factor
T760 52-55 P01375 denotes TNF
T761 52-57 P01375 denotes TNF-α
T762 166-169 P01375 denotes TNF
T763 166-171 P01375 denotes TNF-α

test2

Id Subject Object Predicate Lexical cue
T32 23-50 Protein denotes tumor necrosis factor-alpha
T33 52-57 Protein denotes TNF-α
T34 59-69 Gene_expression denotes production
T35 152-162 Gene_expression denotes production
T36 166-171 Protein denotes TNF-α
R20 T32 T34 themeOf tumor necrosis factor-alpha,production
R22 T36 T35 themeOf TNF-α,production