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PMC:2664230 / 23057-23177 JSONTXT

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bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T9358 0-6 NNP denotes Herein
T9359 6-7 , denotes ,
T9360 8-10 PRP denotes we
T9361 11-17 VBD denotes showed
T9362 18-22 IN denotes that
T9363 23-26 DT denotes the
T9364 27-37 NN denotes activation
T9365 38-41 CC denotes and
T9366 42-45 NN denotes DNA
T9367 46-53 JJ denotes binding
T9368 54-62 NN denotes activity
T9369 63-65 IN denotes of
T9370 66-70 NNP denotes CREB
T9371 71-73 VBZ denotes is
T9372 74-85 VBN denotes upregulated
T9373 86-88 IN denotes in
T9374 89-90 DT denotes a
T9375 91-95 NN denotes dose
T9376 96-105 JJ denotes dependent
T9377 106-112 NN denotes manner
T9378 113-115 IN denotes by
T9379 116-119 NNP denotes PTX
T9380 119-120 . denotes .
R7779 T9358 T9361 npadvmod Herein,showed
R7780 T9359 T9361 punct ",",showed
R7781 T9360 T9361 nsubj we,showed
R7782 T9361 T9361 ROOT showed,showed
R7783 T9362 T9371 mark that,is
R7784 T9363 T9364 det the,activation
R7785 T9364 T9368 nmod activation,activity
R7786 T9365 T9364 cc and,activation
R7787 T9366 T9364 conj DNA,activation
R7788 T9367 T9368 amod binding,activity
R7789 T9368 T9371 nsubj activity,is
R7790 T9369 T9368 prep of,activity
R7791 T9370 T9369 pobj CREB,of
R7792 T9371 T9361 ccomp is,showed
R7793 T9372 T9371 acomp upregulated,is
R7794 T9373 T9372 prep in,upregulated
R7795 T9374 T9375 det a,dose
R7796 T9375 T9373 pobj dose,in
R7797 T9376 T9377 amod dependent,manner
R7798 T9377 T9372 appos manner,upregulated
R7799 T9378 T9372 agent by,upregulated
R7800 T9379 T9378 pobj PTX,by
R7801 T9380 T9361 punct .,showed

GO-BP

Id Subject Object Predicate Lexical cue
T9924 27-53 http://purl.obolibrary.org/obo/GO_0043388 denotes activation and DNA binding
T9925 27-53 http://purl.obolibrary.org/obo/GO_1904744 denotes activation and DNA binding

GO-MF

Id Subject Object Predicate Lexical cue
T10051 42-53 http://purl.obolibrary.org/obo/GO_0003677 denotes DNA binding
T10056 46-53 http://purl.obolibrary.org/obo/GO_0005488 denotes binding

sentences

Id Subject Object Predicate Lexical cue
T8398 0-120 Sentence denotes Herein, we showed that the activation and DNA binding activity of CREB is upregulated in a dose–dependent manner by PTX.
T154 0-120 Sentence denotes Herein, we showed that the activation and DNA binding activity of CREB is upregulated in a dose–dependent manner by PTX.

bionlp-st-ge-2016-reference-tees

Id Subject Object Predicate Lexical cue
T10250 66-70 Protein denotes CREB
T10251 27-37 Positive_regulation denotes activation
T10252 46-53 Binding denotes binding
T10253 74-85 Positive_regulation denotes upregulated
T10254 27-37 Positive_regulation denotes activation
R8274 T10250 T10251 themeOf CREB,activation
R8275 T10250 T10252 themeOf CREB,binding
R8280 T10251 T10253 themeOf activation,upregulated
R8282 T10252 T10254 themeOf binding,activation

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T9758 66-70 Q8TEY5 denotes CREB
T9759 66-70 Q02930 denotes CREB
T9760 66-70 O43889 denotes CREB
T9761 66-70 P15336 denotes CREB
T9762 66-70 P16220 denotes CREB
T9763 66-70 P18848 denotes CREB