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PMC:2664230 / 14347-14487 JSONTXT

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bionlp-st-ge-2016-reference

Id Subject Object Predicate Lexical cue
T6483 47-56 Positive_regulation denotes increased
T6484 57-66 Positive_regulation denotes following
T6481 12-17 Protein denotes I-κBα
T6482 18-33 Phosphorylation denotes phosphorylation
R5368 T6481 T6482 themeOf I-κBα,phosphorylation
R5369 T6482 T6483 themeOf phosphorylation,increased
R5370 T6483 T6484 themeOf increased,following

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T6726 0-11 JJ denotes Cytoplasmic
T6727 12-17 JJ denotes I-κBα
T6728 18-33 NN denotes phosphorylation
T6729 34-37 VB denotes was
T6730 38-46 RB denotes markedly
T6731 47-56 VB denotes increased
T6732 57-66 VB denotes following
T6733 67-70 NN denotes LPS
T6734 71-82 NN denotes stimulation
T6735 83-87 WRB denotes when
T6736 88-96 VB denotes compared
T6737 97-99 TO denotes to
T6738 100-107 NN denotes control
T6739 108-109 -LRB- denotes (
T6740 109-112 CD denotes 100
T6741 113-114 SYM denotes ±
T6742 115-116 CD denotes 0
T6743 117-120 IN denotes vs.
T6744 121-123 CD denotes 20
T6745 124-125 CC denotes ±
T6746 126-128 CD denotes 18
T6747 128-129 -COLON- denotes ;
T6748 130-131 NN denotes P
T6749 132-133 SYM denotes <
T6750 134-138 CD denotes 0.05
T6751 138-139 -RRB- denotes )
R5600 T6728 T6726 arg1Of phosphorylation,Cytoplasmic
R5601 T6728 T6727 arg1Of phosphorylation,I-κBα
R5602 T6728 T6729 arg1Of phosphorylation,was
R5603 T6728 T6731 arg2Of phosphorylation,increased
R5604 T6728 T6736 arg1Of phosphorylation,compared
R5605 T6731 T6729 arg2Of increased,was
R5606 T6731 T6730 arg1Of increased,markedly
R5607 T6731 T6732 arg1Of increased,following
R5608 T6731 T6735 arg1Of increased,when
R5609 T6734 T6732 arg2Of stimulation,following
R5610 T6734 T6733 arg1Of stimulation,LPS
R5611 T6736 T6735 arg2Of compared,when
R5612 T6736 T6737 arg1Of compared,to
R5613 T6738 T6737 arg2Of control,to
R5614 T6738 T6739 arg1Of control,(
R5615 T6742 T6739 arg2Of 0,(
R5616 T6742 T6740 arg1Of 0,100
R5617 T6742 T6741 arg1Of 0,±
R5618 T6742 T6743 arg1Of 0,vs.
R5619 T6742 T6747 arg1Of 0,;
R5620 T6744 T6745 arg1Of 20,±
R5621 T6745 T6743 arg2Of ±,vs.
R5622 T6746 T6745 arg2Of 18,±
R5623 T6748 T6747 arg2Of P,;
R5624 T6748 T6749 arg1Of P,<
R5625 T6748 T6750 arg1Of P,0.05
R5626 T6751 T6739 arg3Of ),(

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T6536 0-11 NNP denotes Cytoplasmic
T6537 12-17 NNP denotes I-κBα
T6538 18-33 NN denotes phosphorylation
T6539 34-37 VBD denotes was
T6540 38-46 RB denotes markedly
T6541 47-56 VBN denotes increased
T6542 57-66 VBG denotes following
T6543 67-70 NNP denotes LPS
T6544 71-82 NN denotes stimulation
T6545 83-87 WRB denotes when
T6546 88-96 VBN denotes compared
T6547 97-99 TO denotes to
T6548 100-107 VB denotes control
T6549 108-109 -LRB- denotes (
T6550 109-112 CD denotes 100
T6551 113-114 CD denotes ±
T6552 115-116 CD denotes 0
T6553 117-120 IN denotes vs.
T6554 121-123 CD denotes 20
T6555 124-125 CD denotes ±
T6556 126-128 CD denotes 18
T6557 128-129 : denotes ;
T6558 130-131 NNP denotes P
T6559 132-133 NNP denotes <
T6560 134-138 CD denotes 0.05
T6561 138-139 -RRB- denotes )
T6562 139-140 . denotes .
R5411 T6536 T6538 compound Cytoplasmic,phosphorylation
R5412 T6537 T6538 compound I-κBα,phosphorylation
R5413 T6538 T6541 nsubjpass phosphorylation,increased
R5414 T6539 T6541 auxpass was,increased
R5415 T6540 T6541 advmod markedly,increased
R5416 T6541 T6541 ROOT increased,increased
R5417 T6542 T6541 prep following,increased
R5418 T6543 T6544 compound LPS,stimulation
R5419 T6544 T6542 pobj stimulation,following
R5420 T6545 T6546 advmod when,compared
R5421 T6546 T6541 advcl compared,increased
R5422 T6547 T6548 aux to,control
R5423 T6548 T6546 xcomp control,compared
R5424 T6549 T6552 punct (,0
R5425 T6550 T6552 nummod 100,0
R5426 T6551 T6552 nummod ±,0
R5427 T6552 T6548 dobj 0,control
R5428 T6553 T6552 prep vs.,0
R5429 T6554 T6556 nummod 20,18
R5430 T6555 T6556 nummod ±,18
R5431 T6556 T6553 pobj 18,vs.
R5432 T6557 T6560 punct ;,0.05
R5433 T6558 T6559 compound P,<
R5434 T6559 T6560 compound <,0.05
R5435 T6560 T6541 npadvmod 0.05,increased
R5436 T6561 T6560 punct ),0.05
R5437 T6562 T6541 punct .,increased

GO-BP

Id Subject Object Predicate Lexical cue
T6893 18-33 http://purl.obolibrary.org/obo/GO_0016310 denotes phosphorylation

sentences

Id Subject Object Predicate Lexical cue
T6499 0-140 Sentence denotes Cytoplasmic I-κBα phosphorylation was markedly increased following LPS stimulation when compared to control (100 ± 0 vs. 20 ± 18; P < 0.05).
T111 0-140 Sentence denotes Cytoplasmic I-κBα phosphorylation was markedly increased following LPS stimulation when compared to control (100 ± 0 vs. 20 ± 18; P < 0.05).

events-check-again

Id Subject Object Predicate Lexical cue
T6934 12-17 Protein denotes I-κBα
T6935 18-33 Phosphorylation denotes phosphorylation
T6936 47-56 Positive_regulation denotes increased
T6937 57-66 Positive_regulation denotes following
R5770 T6934 T6935 themeOf I-κBα,phosphorylation
R5771 T6935 T6936 themeOf phosphorylation,increased
R5772 T6936 T6937 themeOf increased,following

bionlp-st-ge-2016-reference-tees

Id Subject Object Predicate Lexical cue
T6959 0-13 Protein denotes Cytoplasmic I
T6960 14-17 Protein denotes κBα
T6961 18-33 Phosphorylation denotes phosphorylation
T6962 18-33 Phosphorylation denotes phosphorylation
T6963 47-56 Positive_regulation denotes increased
T6964 47-56 Positive_regulation denotes increased
R5788 T6959 T6961 themeOf Cytoplasmic I,phosphorylation
R5789 T6960 T6962 themeOf κBα,phosphorylation
R5790 T6961 T6963 themeOf phosphorylation,increased
R5791 T6962 T6964 themeOf phosphorylation,increased

test2

Id Subject Object Predicate Lexical cue
T6458 12-17 Protein denotes I-κBα
T6459 18-33 Phosphorylation denotes phosphorylation
T6460 47-56 Positive_regulation denotes increased
T6461 57-66 Positive_regulation denotes following
R5352 T6458 T6459 themeOf I-κBα,phosphorylation
R5353 T6459 T6460 themeOf phosphorylation,increased
R5354 T6460 T6461 themeOf increased,following