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PMC:2626671 / 9126-10883 JSONTXT

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2_test

Id Subject Object Predicate Lexical cue
19139168-15516969-59674045 274-276 15516969 denotes 20
19139168-11786644-59674046 1617-1619 11786644 denotes 17

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T5120 0-8 JJ denotes Distinct
T5121 9-17 NN denotes kinetics
T5122 18-20 IN denotes of
T5123 21-26 NN denotes T-bet
T5124 27-30 CC denotes and
T5125 31-36 NN denotes Eomes
T5126 37-47 NN denotes expression
T5127 48-54 IN denotes during
T5128 55-58 NN denotes CTL
T5129 59-74 NN denotes differentiation
T5130 75-78 DT denotes The
T5131 79-84 NN denotes T-box
T5132 85-98 NN denotes transcription
T5133 99-106 NN denotes factors
T5134 107-112 NN denotes T-bet
T5135 113-116 CC denotes and
T5136 117-122 NN denotes Eomes
T5137 123-127 VB denotes have
T5138 128-132 VB denotes been
T5139 133-139 VB denotes linked
T5140 140-142 TO denotes to
T5141 143-146 DT denotes the
T5142 147-157 NN denotes regulation
T5143 158-160 IN denotes of
T5144 161-166 NN denotes genes
T5145 167-175 VB denotes encoding
T5146 176-184 NN denotes effector
T5147 185-194 NN denotes cytokines
T5148 195-196 -LRB- denotes (
T5149 196-200 FW denotes e.g.
T5150 200-201 -COMMA- denotes ,
T5151 202-206 NN denotes Ifng
T5152 206-207 -RRB- denotes )
T5153 208-211 CC denotes and
T5154 212-217 NN denotes genes
T5155 218-227 JJ denotes important
T5156 228-231 IN denotes for
T5157 232-241 JJ denotes cytolytic
T5158 242-250 NN denotes function
T5159 251-252 -LRB- denotes (
T5160 252-256 FW denotes e.g.
T5161 256-257 -COMMA- denotes ,
T5162 258-262 NN denotes Prf1
T5163 263-266 CC denotes and
T5164 267-271 NN denotes GzmB
T5165 271-272 -RRB- denotes )
T5166 273-274 -LRB- denotes (
T5167 274-276 CD denotes 20
T5168 276-277 -RRB- denotes )
T5169 279-281 PRP denotes We
T5170 282-294 VB denotes investigated
T5171 295-298 DT denotes the
T5172 299-307 NN denotes kinetics
T5173 308-310 IN denotes of
T5174 311-321 NN denotes expression
T5175 322-324 IN denotes of
T5176 325-330 DT denotes these
T5177 331-344 NN denotes transcription
T5178 345-352 NN denotes factors
T5179 353-355 IN denotes in
T5180 356-359 PRP-DOLLAR- denotes our
T5181 360-362 FW denotes in
T5182 363-368 FW denotes vitro
T5183 369-377 NN denotes cultures
T5184 378-379 -LRB- denotes (
T5185 379-383 NNP denotes Fig.
T5186 384-385 CD denotes 1
T5187 385-386 -COMMA- denotes ,
T5188 387-390 NN denotes A–D
T5189 390-391 -RRB- denotes )
T5190 393-398 NN denotes T-bet
T5191 399-403 NN denotes mRNA
T5192 404-407 CC denotes and
T5193 408-415 NN denotes protein
T5194 416-420 VB denotes were
T5195 421-424 RB denotes not
T5196 425-435 JJ denotes detectable
T5197 436-438 IN denotes in
T5198 439-444 JJ denotes naive
T5199 445-449 JJ denotes CD8+
T5200 450-451 NN denotes T
T5201 452-457 NN denotes cells
T5202 457-458 -COMMA- denotes ,
T5203 459-462 CC denotes but
T5204 463-467 VB denotes were
T5205 468-476 RB denotes strongly
T5206 477-484 VB denotes induced
T5207 485-489 IN denotes upon
T5208 490-493 NN denotes TCR
T5209 494-501 NN denotes priming
T5210 502-503 -LRB- denotes (
T5211 503-506 NN denotes day
T5212 507-508 CD denotes 2
T5213 508-509 -RRB- denotes )
T5214 510-513 CC denotes and
T5215 514-522 VB denotes remained
T5216 523-532 VB denotes expressed
T5217 533-540 IN denotes through
T5218 541-544 NN denotes day
T5219 545-546 CD denotes 6
T5220 547-549 IN denotes of
T5221 550-565 NN denotes differentiation
T5222 566-567 -LRB- denotes (
T5223 567-571 NN denotes Fig.
T5224 572-573 CD denotes 1
T5225 573-574 -COMMA- denotes ,
T5226 575-576 NN denotes A
T5227 577-580 CC denotes and
T5228 581-582 NN denotes C
T5229 582-583 -COLON- denotes ;
T5230 584-594 VB denotes quantified
T5231 595-597 IN denotes in
T5232 598-602 NNP denotes Fig.
T5233 603-604 CD denotes 1
T5234 604-605 -COMMA- denotes ,
T5235 606-607 NN denotes B
T5236 608-611 CC denotes and
T5237 612-613 NN denotes D
T5238 613-614 -RRB- denotes )
T5239 616-618 IN denotes In
T5240 619-627 NN denotes contrast
T5241 627-628 -COMMA- denotes ,
T5242 629-634 NN denotes Eomes
T5243 635-645 NN denotes expression
T5244 646-649 VB denotes was
T5245 650-653 JJ denotes low
T5246 654-656 CC denotes or
T5247 657-669 JJ denotes undetectable
T5248 670-672 IN denotes at
T5249 673-677 CC denotes both
T5250 678-681 DT denotes the
T5251 682-686 NN denotes mRNA
T5252 687-690 CC denotes and
T5253 691-698 NN denotes protein
T5254 699-705 NN denotes levels
T5255 706-708 IN denotes in
T5256 709-714 JJ denotes naive
T5257 715-719 JJ denotes CD8+
T5258 720-721 NN denotes T
T5259 722-727 NN denotes cells
T5260 727-728 -COMMA- denotes ,
T5261 729-732 CC denotes and
T5262 733-736 NN denotes TCR
T5263 737-744 NN denotes priming
T5264 745-747 IN denotes in
T5265 748-755 NN denotes culture
T5266 756-759 VB denotes had
T5267 760-764 RB denotes only
T5268 765-766 DT denotes a
T5269 767-773 JJ denotes modest
T5270 774-780 NN denotes effect
T5271 781-783 IN denotes on
T5272 784-787 PRP-DOLLAR- denotes its
T5273 788-798 NN denotes expression
T5274 799-801 IN denotes at
T5275 802-805 NN denotes day
T5276 806-807 CD denotes 2
T5277 808-809 -LRB- denotes (
T5278 809-813 NN denotes Fig.
T5279 814-815 CD denotes 1
T5280 815-816 -COMMA- denotes ,
T5281 817-818 NN denotes A
T5282 819-822 CC denotes and
T5283 823-824 NN denotes C
T5284 824-825 -RRB- denotes )
T5285 827-833 JJ denotes Strong
T5286 834-843 NN denotes induction
T5287 844-846 IN denotes of
T5288 847-852 NN denotes Eomes
T5289 853-857 NN denotes mRNA
T5290 858-861 CC denotes and
T5291 862-869 NN denotes protein
T5292 870-873 VB denotes was
T5293 874-878 RB denotes only
T5294 879-887 VB denotes observed
T5295 888-890 IN denotes at
T5296 891-894 NN denotes day
T5297 895-896 CD denotes 4
T5298 897-900 CC denotes and
T5299 901-906 RB denotes later
T5300 907-908 -LRB- denotes (
T5301 908-912 NNP denotes Fig.
T5302 913-914 CD denotes 1
T5303 914-915 -COMMA- denotes ,
T5304 916-917 NN denotes A
T5305 918-921 CC denotes and
T5306 922-923 NN denotes C
T5307 923-924 -RRB- denotes )
T5308 926-931 NN denotes T-bet
T5309 932-936 NN denotes mRNA
T5310 937-947 NN denotes expression
T5311 948-956 RB denotes slightly
T5312 957-965 VB denotes preceded
T5313 966-969 DT denotes the
T5314 970-980 NN denotes expression
T5315 981-983 IN denotes of
T5316 984-988 NN denotes GzmB
T5317 989-993 NN denotes mRNA
T5318 993-994 -COLON- denotes ;
T5319 995-1004 RB denotes similarly
T5320 1004-1005 -COMMA- denotes ,
T5321 1006-1011 NN denotes Eomes
T5322 1012-1016 NN denotes mRNA
T5323 1017-1020 CC denotes and
T5324 1021-1028 NN denotes protein
T5325 1029-1033 VB denotes were
T5326 1034-1043 VB denotes expressed
T5327 1044-1046 CD denotes ∼1
T5328 1047-1048 NN denotes d
T5329 1049-1054 RB denotes ahead
T5330 1055-1057 IN denotes of
T5331 1058-1061 DT denotes the
T5332 1062-1074 NN denotes reexpression
T5333 1075-1077 IN denotes of
T5334 1078-1086 NN denotes perforin
T5335 1087-1091 NN denotes mRNA
T5336 1092-1095 CC denotes and
T5337 1096-1103 NN denotes protein
T5338 1103-1104 -COMMA- denotes ,
T5339 1105-1117 RB denotes respectively
T5340 1118-1119 -LRB- denotes (
T5341 1119-1123 NNP denotes Fig.
T5342 1124-1125 CD denotes 1
T5343 1125-1126 -COMMA- denotes ,
T5344 1127-1128 NN denotes B
T5345 1129-1132 CC denotes and
T5346 1133-1134 NN denotes D
T5347 1134-1135 -RRB- denotes )
T5348 1137-1141 DT denotes This
T5349 1142-1150 JJ denotes detailed
T5350 1151-1158 JJ denotes kinetic
T5351 1159-1167 NN denotes analysis
T5352 1168-1177 VB denotes suggested
T5353 1178-1182 IN denotes that
T5354 1182-1183 -COMMA- denotes ,
T5355 1184-1189 IN denotes under
T5356 1190-1193 PRP-DOLLAR- denotes our
T5357 1194-1201 NN denotes culture
T5358 1202-1212 NN denotes conditions
T5359 1212-1213 -COMMA- denotes ,
T5360 1214-1219 NN denotes T-bet
T5361 1220-1223 CC denotes and
T5362 1224-1229 NN denotes Eomes
T5363 1230-1240 VB denotes contribute
T5364 1241-1243 TO denotes to
T5365 1244-1252 JJ denotes distinct
T5366 1253-1260 NN denotes aspects
T5367 1261-1263 IN denotes of
T5368 1264-1268 NN denotes gene
T5369 1269-1282 NN denotes transcription
T5370 1283-1289 IN denotes during
T5371 1290-1293 NN denotes CTL
T5372 1294-1309 NN denotes differentiation
T5373 1311-1316 NN denotes T-bet
T5374 1317-1319 VB denotes is
T5375 1320-1328 VB denotes required
T5376 1329-1334 RB denotes early
T5377 1335-1338 IN denotes for
T5378 1339-1344 NN denotes IFN-γ
T5379 1345-1355 NN denotes production
T5380 1355-1356 -COMMA- denotes ,
T5381 1357-1360 CC denotes and
T5382 1361-1364 PRP-DOLLAR- denotes our
T5383 1365-1369 NN denotes data
T5384 1370-1379 VB denotes suggested
T5385 1380-1384 IN denotes that
T5386 1385-1390 NN denotes Eomes
T5387 1391-1396 MD denotes might
T5388 1397-1400 RB denotes not
T5389 1401-1409 VB denotes function
T5390 1410-1416 IN denotes during
T5391 1417-1421 DT denotes this
T5392 1422-1427 JJ denotes early
T5393 1428-1434 NN denotes period
T5394 1435-1438 CC denotes but
T5395 1439-1445 RB denotes rather
T5396 1446-1451 MD denotes might
T5397 1452-1462 VB denotes contribute
T5398 1463-1468 RB denotes later
T5399 1469-1471 TO denotes to
T5400 1472-1475 DT denotes the
T5401 1476-1483 NN denotes control
T5402 1484-1486 IN denotes of
T5403 1487-1495 NN denotes perforin
T5404 1496-1506 NN denotes expression
T5405 1508-1511 PRP-DOLLAR- denotes Our
T5406 1512-1516 NN denotes data
T5407 1517-1523 VB denotes seemed
T5408 1524-1528 RB denotes most
T5409 1529-1539 JJ denotes consistent
T5410 1540-1544 IN denotes with
T5411 1545-1546 DT denotes a
T5412 1547-1552 NN denotes model
T5413 1553-1555 IN denotes in
T5414 1556-1561 WDT denotes which
T5415 1562-1565 NN denotes TCR
T5416 1566-1573 NN denotes signals
T5417 1574-1580 VB denotes induce
T5418 1581-1586 NN denotes T-bet
T5419 1586-1587 -COMMA- denotes ,
T5420 1588-1593 WDT denotes which
T5421 1594-1596 IN denotes in
T5422 1597-1601 NN denotes turn
T5423 1602-1609 VB denotes induces
T5424 1610-1615 NN denotes IFN-γ
T5425 1616-1617 -LRB- denotes (
T5426 1617-1619 CD denotes 17
T5427 1619-1620 -RRB- denotes )
T5428 1621-1624 CC denotes and
T5429 1625-1633 RB denotes possibly
T5430 1634-1642 NN denotes granzyme
T5431 1643-1644 NN denotes B
T5432 1644-1645 -COLON- denotes ;
T5433 1646-1658 RB denotes subsequently
T5434 1658-1659 -COMMA- denotes ,
T5435 1660-1665 NN denotes Eomes
T5436 1666-1668 VB denotes is
T5437 1669-1676 VB denotes induced
T5438 1677-1683 IN denotes during
T5439 1684-1687 DT denotes the
T5440 1688-1694 NN denotes period
T5441 1695-1697 IN denotes of
T5442 1698-1704 JJ denotes clonal
T5443 1705-1714 NN denotes expansion
T5444 1715-1717 IN denotes in
T5445 1718-1722 NN denotes IL-2
T5446 1723-1726 CC denotes and
T5447 1727-1736 VB denotes activates
T5448 1737-1745 NN denotes perforin
T5449 1746-1756 NN denotes expression
R4074 T5121 T5120 arg1Of kinetics,Distinct
R4075 T5121 T5122 arg1Of kinetics,of
R4076 T5121 T5127 arg1Of kinetics,during
R4077 T5123 T5124 arg1Of T-bet,and
R4078 T5125 T5124 arg2Of Eomes,and
R4079 T5126 T5122 arg2Of expression,of
R4080 T5126 T5123 arg1Of expression,T-bet
R4081 T5126 T5125 arg1Of expression,Eomes
R4082 T5129 T5127 arg2Of differentiation,during
R4083 T5129 T5128 arg1Of differentiation,CTL
R4084 T5133 T5131 arg1Of factors,T-box
R4085 T5133 T5132 arg1Of factors,transcription
R4086 T5134 T5135 arg1Of T-bet,and
R4087 T5135 T5130 arg1Of and,The
R4088 T5135 T5133 arg1Of and,factors
R4089 T5135 T5137 arg1Of and,have
R4090 T5135 T5138 arg1Of and,been
R4091 T5135 T5139 arg2Of and,linked
R4092 T5136 T5135 arg2Of Eomes,and
R4093 T5139 T5137 arg2Of linked,have
R4094 T5139 T5138 arg2Of linked,been
R4095 T5139 T5140 arg1Of linked,to
R4096 T5142 T5140 arg2Of regulation,to
R4097 T5142 T5141 arg1Of regulation,the
R4098 T5142 T5143 arg1Of regulation,of
R4099 T5144 T5143 arg2Of genes,of
R4100 T5144 T5145 arg1Of genes,encoding
R4101 T5147 T5146 arg1Of cytokines,effector
R4102 T5147 T5148 arg1Of cytokines,(
R4103 T5147 T5153 arg1Of cytokines,and
R4104 T5151 T5148 arg2Of Ifng,(
R4105 T5151 T5149 arg1Of Ifng,e.g.
R4106 T5151 T5150 arg1Of Ifng,","
R4107 T5152 T5148 arg3Of ),(
R4108 T5153 T5145 arg2Of and,encoding
R4109 T5153 T5159 arg1Of and,(
R4110 T5153 T5166 arg1Of and,(
R4111 T5154 T5153 arg2Of genes,and
R4112 T5154 T5155 arg1Of genes,important
R4113 T5155 T5156 arg1Of important,for
R4114 T5158 T5156 arg2Of function,for
R4115 T5158 T5157 arg1Of function,cytolytic
R4116 T5162 T5163 arg1Of Prf1,and
R4117 T5163 T5159 arg2Of and,(
R4118 T5163 T5160 arg1Of and,e.g.
R4119 T5163 T5161 arg1Of and,","
R4120 T5164 T5163 arg2Of GzmB,and
R4121 T5165 T5159 arg3Of ),(
R4122 T5167 T5166 arg2Of 20,(
R4123 T5168 T5166 arg3Of ),(
R4124 T5169 T5170 arg1Of We,investigated
R4125 T5172 T5170 arg2Of kinetics,investigated
R4126 T5172 T5171 arg1Of kinetics,the
R4127 T5172 T5173 arg1Of kinetics,of
R4128 T5174 T5173 arg2Of expression,of
R4129 T5174 T5175 arg1Of expression,of
R4130 T5178 T5175 arg2Of factors,of
R4131 T5178 T5176 arg1Of factors,these
R4132 T5178 T5177 arg1Of factors,transcription
R4133 T5178 T5179 arg1Of factors,in
R4134 T5182 T5181 arg1Of vitro,in
R4135 T5183 T5179 arg2Of cultures,in
R4136 T5183 T5180 arg1Of cultures,our
R4137 T5183 T5182 arg1Of cultures,vitro
R4138 T5183 T5184 arg1Of cultures,(
R4139 T5185 T5184 arg2Of Fig.,(
R4140 T5185 T5186 arg1Of Fig.,1
R4141 T5185 T5187 arg1Of Fig.,","
R4142 T5188 T5187 arg2Of A–D,","
R4143 T5189 T5184 arg3Of ),(
R4144 T5191 T5190 arg1Of mRNA,T-bet
R4145 T5191 T5192 arg1Of mRNA,and
R4146 T5192 T5194 arg1Of and,were
R4147 T5192 T5196 arg1Of and,detectable
R4148 T5192 T5204 arg1Of and,were
R4149 T5192 T5206 arg2Of and,induced
R4150 T5192 T5215 arg1Of and,remained
R4151 T5192 T5216 arg2Of and,expressed
R4152 T5193 T5192 arg2Of protein,and
R4153 T5194 T5195 arg1Of were,not
R4154 T5194 T5203 arg1Of were,but
R4155 T5196 T5194 arg2Of detectable,were
R4156 T5196 T5197 arg1Of detectable,in
R4157 T5201 T5197 arg2Of cells,in
R4158 T5201 T5198 arg1Of cells,naive
R4159 T5201 T5199 arg1Of cells,CD8+
R4160 T5201 T5200 arg1Of cells,T
R4161 T5203 T5202 arg1Of but,","
R4162 T5203 T5214 arg1Of but,and
R4163 T5206 T5203 arg2Of induced,but
R4164 T5206 T5204 arg2Of induced,were
R4165 T5206 T5205 arg1Of induced,strongly
R4166 T5206 T5207 arg1Of induced,upon
R4167 T5209 T5207 arg2Of priming,upon
R4168 T5209 T5208 arg1Of priming,TCR
R4169 T5209 T5210 arg1Of priming,(
R4170 T5211 T5210 arg2Of day,(
R4171 T5211 T5212 arg1Of day,2
R4172 T5213 T5210 arg3Of ),(
R4173 T5216 T5214 arg2Of expressed,and
R4174 T5216 T5215 arg2Of expressed,remained
R4175 T5216 T5217 arg1Of expressed,through
R4176 T5218 T5217 arg2Of day,through
R4177 T5218 T5219 arg1Of day,6
R4178 T5218 T5220 arg1Of day,of
R4179 T5221 T5220 arg2Of differentiation,of
R4180 T5221 T5222 arg1Of differentiation,(
R4181 T5223 T5222 arg2Of Fig.,(
R4182 T5223 T5224 arg1Of Fig.,1
R4183 T5223 T5225 arg1Of Fig.,","
R4184 T5223 T5234 arg1Of Fig.,","
R4185 T5226 T5227 arg1Of A,and
R4186 T5227 T5225 arg2Of and,","
R4187 T5227 T5230 arg2Of and,quantified
R4188 T5228 T5227 arg2Of C,and
R4189 T5230 T5229 arg1Of quantified,;
R4190 T5230 T5231 arg1Of quantified,in
R4191 T5232 T5231 arg2Of Fig.,in
R4192 T5232 T5233 arg1Of Fig.,1
R4193 T5235 T5236 arg1Of B,and
R4194 T5236 T5234 arg2Of and,","
R4195 T5237 T5236 arg2Of D,and
R4196 T5238 T5222 arg3Of ),(
R4197 T5240 T5239 arg2Of contrast,In
R4198 T5243 T5242 arg1Of expression,Eomes
R4199 T5243 T5244 arg1Of expression,was
R4200 T5243 T5245 arg1Of expression,low
R4201 T5243 T5247 arg1Of expression,undetectable
R4202 T5244 T5239 arg1Of was,In
R4203 T5244 T5241 arg1Of was,","
R4204 T5244 T5248 arg1Of was,at
R4205 T5244 T5261 arg1Of was,and
R4206 T5245 T5246 arg1Of low,or
R4207 T5246 T5244 arg2Of or,was
R4208 T5247 T5246 arg2Of undetectable,or
R4209 T5251 T5252 arg1Of mRNA,and
R4210 T5253 T5252 arg2Of protein,and
R4211 T5254 T5248 arg2Of levels,at
R4212 T5254 T5249 arg1Of levels,both
R4213 T5254 T5250 arg1Of levels,the
R4214 T5254 T5251 arg1Of levels,mRNA
R4215 T5254 T5253 arg1Of levels,protein
R4216 T5254 T5255 arg1Of levels,in
R4217 T5259 T5255 arg2Of cells,in
R4218 T5259 T5256 arg1Of cells,naive
R4219 T5259 T5257 arg1Of cells,CD8+
R4220 T5259 T5258 arg1Of cells,T
R4221 T5261 T5260 arg1Of and,","
R4222 T5263 T5262 arg1Of priming,TCR
R4223 T5263 T5264 arg1Of priming,in
R4224 T5263 T5266 arg1Of priming,had
R4225 T5265 T5264 arg2Of culture,in
R4226 T5266 T5261 arg2Of had,and
R4227 T5266 T5271 arg1Of had,on
R4228 T5270 T5266 arg2Of effect,had
R4229 T5270 T5267 arg1Of effect,only
R4230 T5270 T5268 arg1Of effect,a
R4231 T5270 T5269 arg1Of effect,modest
R4232 T5273 T5271 arg2Of expression,on
R4233 T5273 T5272 arg1Of expression,its
R4234 T5273 T5274 arg1Of expression,at
R4235 T5275 T5274 arg2Of day,at
R4236 T5275 T5276 arg1Of day,2
R4237 T5275 T5277 arg1Of day,(
R4238 T5278 T5277 arg2Of Fig.,(
R4239 T5278 T5279 arg1Of Fig.,1
R4240 T5278 T5280 arg1Of Fig.,","
R4241 T5281 T5282 arg1Of A,and
R4242 T5282 T5280 arg2Of and,","
R4243 T5283 T5282 arg2Of C,and
R4244 T5284 T5277 arg3Of ),(
R4245 T5286 T5285 arg1Of induction,Strong
R4246 T5286 T5287 arg1Of induction,of
R4247 T5286 T5292 arg1Of induction,was
R4248 T5286 T5294 arg2Of induction,observed
R4249 T5289 T5290 arg1Of mRNA,and
R4250 T5290 T5287 arg2Of and,of
R4251 T5290 T5288 arg1Of and,Eomes
R4252 T5291 T5290 arg2Of protein,and
R4253 T5294 T5292 arg2Of observed,was
R4254 T5294 T5293 arg1Of observed,only
R4255 T5294 T5295 arg1Of observed,at
R4256 T5294 T5300 arg1Of observed,(
R4257 T5296 T5297 arg1Of day,4
R4258 T5296 T5298 arg1Of day,and
R4259 T5299 T5295 arg2Of later,at
R4260 T5299 T5296 arg1Of later,day
R4261 T5301 T5300 arg2Of Fig.,(
R4262 T5301 T5302 arg1Of Fig.,1
R4263 T5301 T5303 arg1Of Fig.,","
R4264 T5304 T5305 arg1Of A,and
R4265 T5305 T5303 arg2Of and,","
R4266 T5306 T5305 arg2Of C,and
R4267 T5307 T5300 arg3Of ),(
R4268 T5310 T5308 arg1Of expression,T-bet
R4269 T5310 T5309 arg1Of expression,mRNA
R4270 T5310 T5312 arg1Of expression,preceded
R4271 T5312 T5311 arg1Of preceded,slightly
R4272 T5312 T5318 arg1Of preceded,;
R4273 T5314 T5312 arg2Of expression,preceded
R4274 T5314 T5313 arg1Of expression,the
R4275 T5314 T5315 arg1Of expression,of
R4276 T5317 T5315 arg2Of mRNA,of
R4277 T5317 T5316 arg1Of mRNA,GzmB
R4278 T5322 T5323 arg1Of mRNA,and
R4279 T5323 T5321 arg1Of and,Eomes
R4280 T5323 T5325 arg1Of and,were
R4281 T5323 T5326 arg2Of and,expressed
R4282 T5324 T5323 arg2Of protein,and
R4283 T5326 T5318 arg2Of expressed,;
R4284 T5326 T5319 arg1Of expressed,similarly
R4285 T5326 T5320 arg1Of expressed,","
R4286 T5326 T5325 arg2Of expressed,were
R4287 T5326 T5327 arg1Of expressed,∼1
R4288 T5326 T5340 arg1Of expressed,(
R4289 T5327 T5328 arg1Of ∼1,d
R4290 T5327 T5329 arg1Of ∼1,ahead
R4291 T5327 T5338 arg1Of ∼1,","
R4292 T5327 T5339 arg1Of ∼1,respectively
R4293 T5329 T5330 arg1Of ahead,of
R4294 T5332 T5330 arg2Of reexpression,of
R4295 T5332 T5331 arg1Of reexpression,the
R4296 T5332 T5333 arg1Of reexpression,of
R4297 T5335 T5334 arg1Of mRNA,perforin
R4298 T5335 T5336 arg1Of mRNA,and
R4299 T5336 T5333 arg2Of and,of
R4300 T5337 T5336 arg2Of protein,and
R4301 T5341 T5342 arg1Of Fig.,1
R4302 T5341 T5343 arg1Of Fig.,","
R4303 T5343 T5345 arg1Of ",",and
R4304 T5344 T5343 arg2Of B,","
R4305 T5345 T5340 arg2Of and,(
R4306 T5346 T5345 arg2Of D,and
R4307 T5347 T5340 arg3Of ),(
R4308 T5351 T5348 arg1Of analysis,This
R4309 T5351 T5349 arg1Of analysis,detailed
R4310 T5351 T5350 arg1Of analysis,kinetic
R4311 T5351 T5352 arg1Of analysis,suggested
R4312 T5358 T5355 arg2Of conditions,under
R4313 T5358 T5356 arg1Of conditions,our
R4314 T5358 T5357 arg1Of conditions,culture
R4315 T5360 T5361 arg1Of T-bet,and
R4316 T5361 T5363 arg1Of and,contribute
R4317 T5362 T5361 arg2Of Eomes,and
R4318 T5363 T5352 arg2Of contribute,suggested
R4319 T5363 T5353 arg1Of contribute,that
R4320 T5363 T5354 arg1Of contribute,","
R4321 T5363 T5355 arg1Of contribute,under
R4322 T5363 T5359 arg1Of contribute,","
R4323 T5363 T5364 arg1Of contribute,to
R4324 T5363 T5370 arg1Of contribute,during
R4325 T5366 T5364 arg2Of aspects,to
R4326 T5366 T5365 arg1Of aspects,distinct
R4327 T5366 T5367 arg1Of aspects,of
R4328 T5369 T5367 arg2Of transcription,of
R4329 T5369 T5368 arg1Of transcription,gene
R4330 T5372 T5370 arg2Of differentiation,during
R4331 T5372 T5371 arg1Of differentiation,CTL
R4332 T5373 T5374 arg1Of T-bet,is
R4333 T5373 T5375 arg2Of T-bet,required
R4334 T5375 T5374 arg2Of required,is
R4335 T5375 T5376 arg1Of required,early
R4336 T5375 T5377 arg1Of required,for
R4337 T5375 T5381 arg1Of required,and
R4338 T5379 T5377 arg2Of production,for
R4339 T5379 T5378 arg1Of production,IFN-γ
R4340 T5381 T5380 arg1Of and,","
R4341 T5383 T5382 arg1Of data,our
R4342 T5383 T5384 arg1Of data,suggested
R4343 T5384 T5381 arg2Of suggested,and
R4344 T5386 T5387 arg1Of Eomes,might
R4345 T5386 T5389 arg1Of Eomes,function
R4346 T5386 T5396 arg1Of Eomes,might
R4347 T5386 T5397 arg1Of Eomes,contribute
R4348 T5389 T5387 arg2Of function,might
R4349 T5389 T5388 arg1Of function,not
R4350 T5389 T5390 arg1Of function,during
R4351 T5389 T5394 arg1Of function,but
R4352 T5393 T5390 arg2Of period,during
R4353 T5393 T5391 arg1Of period,this
R4354 T5393 T5392 arg1Of period,early
R4355 T5394 T5384 arg2Of but,suggested
R4356 T5394 T5385 arg1Of but,that
R4357 T5397 T5394 arg2Of contribute,but
R4358 T5397 T5395 arg1Of contribute,rather
R4359 T5397 T5396 arg2Of contribute,might
R4360 T5397 T5399 arg1Of contribute,to
R4361 T5399 T5398 arg1Of to,later
R4362 T5401 T5399 arg2Of control,to
R4363 T5401 T5400 arg1Of control,the
R4364 T5401 T5402 arg1Of control,of
R4365 T5404 T5402 arg2Of expression,of
R4366 T5404 T5403 arg1Of expression,perforin
R4367 T5406 T5405 arg1Of data,Our
R4368 T5406 T5407 arg1Of data,seemed
R4369 T5406 T5409 arg1Of data,consistent
R4370 T5407 T5432 arg1Of seemed,;
R4371 T5409 T5407 arg2Of consistent,seemed
R4372 T5409 T5408 arg1Of consistent,most
R4373 T5409 T5410 arg1Of consistent,with
R4374 T5412 T5410 arg2Of model,with
R4375 T5412 T5411 arg1Of model,a
R4376 T5412 T5413 arg2Of model,in
R4377 T5412 T5414 arg1Of model,which
R4378 T5412 T5419 arg1Of model,","
R4379 T5412 T5420 arg1Of model,which
R4380 T5412 T5423 arg1Of model,induces
R4381 T5416 T5415 arg1Of signals,TCR
R4382 T5416 T5417 arg1Of signals,induce
R4383 T5417 T5413 arg1Of induce,in
R4384 T5418 T5417 arg2Of T-bet,induce
R4385 T5422 T5421 arg2Of turn,in
R4386 T5423 T5421 arg1Of induces,in
R4387 T5424 T5425 arg1Of IFN-γ,(
R4388 T5424 T5428 arg1Of IFN-γ,and
R4389 T5426 T5425 arg2Of 17,(
R4390 T5427 T5425 arg3Of ),(
R4391 T5428 T5423 arg2Of and,induces
R4392 T5431 T5428 arg2Of B,and
R4393 T5431 T5429 arg1Of B,possibly
R4394 T5431 T5430 arg1Of B,granzyme
R4395 T5435 T5436 arg1Of Eomes,is
R4396 T5435 T5437 arg2Of Eomes,induced
R4397 T5435 T5447 arg1Of Eomes,activates
R4398 T5437 T5436 arg2Of induced,is
R4399 T5437 T5438 arg1Of induced,during
R4400 T5437 T5446 arg1Of induced,and
R4401 T5440 T5438 arg2Of period,during
R4402 T5440 T5439 arg1Of period,the
R4403 T5440 T5441 arg1Of period,of
R4404 T5443 T5441 arg2Of expansion,of
R4405 T5443 T5442 arg1Of expansion,clonal
R4406 T5443 T5444 arg1Of expansion,in
R4407 T5445 T5444 arg2Of IL-2,in
R4408 T5446 T5432 arg2Of and,;
R4409 T5446 T5433 arg1Of and,subsequently
R4410 T5446 T5434 arg1Of and,","
R4411 T5447 T5446 arg2Of activates,and
R4412 T5449 T5447 arg2Of expression,activates
R4413 T5449 T5448 arg1Of expression,perforin

bionlp-st-ge-2016-coref

Id Subject Object Predicate Lexical cue
T5450 161-166 Anaphor denotes genes
T5451 202-206 Antecedent denotes Ifng
T5452 212-217 Anaphor denotes genes
T5453 258-262 Antecedent denotes Prf1
T5454 267-271 Antecedent denotes GzmB
T5455 325-352 Anaphor denotes these transcription factors
T5456 107-112 Antecedent denotes T-bet
T5457 117-122 Antecedent denotes Eomes
T5458 784-787 Anaphor denotes its
T5459 629-634 Antecedent denotes Eomes
T5460 1588-1593 Anaphor denotes which
T5461 1581-1586 Antecedent denotes T-bet
R4414 T5450 T5451 boundBy genes,Ifng
R4415 T5452 T5453 boundBy genes,Prf1
R4416 T5452 T5454 boundBy genes,GzmB
R4417 T5455 T5456 boundBy these transcription factors,T-bet
R4418 T5455 T5457 boundBy these transcription factors,Eomes
R4419 T5458 T5459 boundBy its,Eomes
R4420 T5460 T5461 boundBy which,T-bet

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T4777 0-8 JJ denotes Distinct
T4778 9-17 NNS denotes kinetics
T4779 18-20 IN denotes of
T4780 21-26 NNP denotes T-bet
T4781 27-30 CC denotes and
T4782 31-36 NNP denotes Eomes
T4783 37-47 NN denotes expression
T4784 48-54 IN denotes during
T4785 55-58 NNP denotes CTL
T4786 59-74 NN denotes differentiation
T4787 75-78 DT denotes The
T4788 79-84 NN denotes T-box
T4789 85-98 NN denotes transcription
T4790 99-106 NNS denotes factors
T4791 107-112 NNP denotes T-bet
T4792 113-116 CC denotes and
T4793 117-122 NNP denotes Eomes
T4794 123-127 VBP denotes have
T4795 128-132 VBN denotes been
T4796 133-139 VBN denotes linked
T4797 140-142 TO denotes to
T4798 143-146 DT denotes the
T4799 147-157 NN denotes regulation
T4800 158-160 IN denotes of
T4801 161-166 NNS denotes genes
T4802 167-175 VBG denotes encoding
T4803 176-184 NN denotes effector
T4804 185-194 NNS denotes cytokines
T4805 195-196 -LRB- denotes (
T4806 196-200 FW denotes e.g.
T4807 200-201 , denotes ,
T4808 202-206 NNP denotes Ifng
T4809 206-207 -RRB- denotes )
T4810 208-211 CC denotes and
T4811 212-217 NNS denotes genes
T4812 218-227 JJ denotes important
T4813 228-231 IN denotes for
T4814 232-241 JJ denotes cytolytic
T4815 242-250 NN denotes function
T4816 251-252 -LRB- denotes (
T4817 252-256 FW denotes e.g.
T4818 256-257 , denotes ,
T4819 258-262 NNP denotes Prf1
T4820 263-266 CC denotes and
T4821 267-271 NNP denotes GzmB
T4822 271-272 -RRB- denotes )
T4823 273-274 -LRB- denotes (
T4824 274-276 CD denotes 20
T4825 276-277 -RRB- denotes )
T4826 277-278 . denotes .
T4827 279-281 PRP denotes We
T4828 282-294 VBD denotes investigated
T4829 295-298 DT denotes the
T4830 299-307 NNS denotes kinetics
T4831 308-310 IN denotes of
T4832 311-321 NN denotes expression
T4833 322-324 IN denotes of
T4834 325-330 DT denotes these
T4835 331-344 NN denotes transcription
T4836 345-352 NNS denotes factors
T4837 353-355 IN denotes in
T4838 356-359 PRP$ denotes our
T4839 360-362 IN denotes in
T4840 363-368 NN denotes vitro
T4841 369-377 NNS denotes cultures
T4842 378-379 -LRB- denotes (
T4843 379-383 NNP denotes Fig.
T4844 384-385 CD denotes 1
T4845 385-386 , denotes ,
T4846 387-388 DT denotes A
T4847 389-390 NNP denotes D
T4848 390-391 -RRB- denotes )
T4849 391-392 . denotes .
T4850 393-398 NNP denotes T-bet
T4851 399-403 NNP denotes mRNA
T4852 404-407 CC denotes and
T4853 408-415 NN denotes protein
T4854 416-420 VBD denotes were
T4855 421-424 RB denotes not
T4856 425-435 JJ denotes detectable
T4857 436-438 IN denotes in
T4858 439-444 JJ denotes naive
T4859 445-448 NNP denotes CD8
T4860 448-449 CD denotes +
T4861 450-451 NNP denotes T
T4862 452-457 NNS denotes cells
T4863 457-458 , denotes ,
T4864 459-462 CC denotes but
T4865 463-467 VBD denotes were
T4866 468-476 RB denotes strongly
T4867 477-484 JJ denotes induced
T4868 485-489 IN denotes upon
T4869 490-493 NNP denotes TCR
T4870 494-501 NN denotes priming
T4871 502-503 -LRB- denotes (
T4872 503-506 NN denotes day
T4873 507-508 CD denotes 2
T4874 508-509 -RRB- denotes )
T4875 510-513 CC denotes and
T4876 514-522 VBD denotes remained
T4877 523-532 VBN denotes expressed
T4878 533-540 IN denotes through
T4879 541-544 NN denotes day
T4880 545-546 CD denotes 6
T4881 547-549 IN denotes of
T4882 550-565 NN denotes differentiation
T4883 566-567 -LRB- denotes (
T4884 567-571 FW denotes Fig.
T4885 572-573 CD denotes 1
T4886 573-574 , denotes ,
T4887 575-576 DT denotes A
T4888 577-580 CC denotes and
T4889 581-582 NNP denotes C
T4890 582-583 : denotes ;
T4891 584-594 VBN denotes quantified
T4892 595-597 IN denotes in
T4893 598-602 NNP denotes Fig.
T4894 603-604 CD denotes 1
T4895 604-605 , denotes ,
T4896 606-607 NNP denotes B
T4897 608-611 CC denotes and
T4898 612-613 NNP denotes D
T4899 613-614 -RRB- denotes )
T4900 614-615 . denotes .
T4901 616-618 IN denotes In
T4902 619-627 NN denotes contrast
T4903 627-628 , denotes ,
T4904 629-634 NNP denotes Eomes
T4905 635-645 NN denotes expression
T4906 646-649 VBD denotes was
T4907 650-653 JJ denotes low
T4908 654-656 CC denotes or
T4909 657-669 JJ denotes undetectable
T4910 670-672 IN denotes at
T4911 673-677 DT denotes both
T4912 678-681 DT denotes the
T4913 682-686 NNP denotes mRNA
T4914 687-690 CC denotes and
T4915 691-698 NN denotes protein
T4916 699-705 NNS denotes levels
T4917 706-708 IN denotes in
T4918 709-714 JJ denotes naive
T4919 715-718 NNP denotes CD8
T4920 718-719 CD denotes +
T4921 720-721 NNP denotes T
T4922 722-727 NNS denotes cells
T4923 727-728 , denotes ,
T4924 729-732 CC denotes and
T4925 733-736 NNP denotes TCR
T4926 737-744 VBG denotes priming
T4927 745-747 IN denotes in
T4928 748-755 NN denotes culture
T4929 756-759 VBD denotes had
T4930 760-764 RB denotes only
T4931 765-766 DT denotes a
T4932 767-773 JJ denotes modest
T4933 774-780 NN denotes effect
T4934 781-783 IN denotes on
T4935 784-787 PRP$ denotes its
T4936 788-798 NN denotes expression
T4937 799-801 IN denotes at
T4938 802-805 NN denotes day
T4939 806-807 CD denotes 2
T4940 808-809 -LRB- denotes (
T4941 809-813 NN denotes Fig.
T4942 814-815 CD denotes 1
T4943 815-816 , denotes ,
T4944 817-818 DT denotes A
T4945 819-822 CC denotes and
T4946 823-824 NNP denotes C
T4947 824-825 -RRB- denotes )
T4948 825-826 . denotes .
T4949 827-833 JJ denotes Strong
T4950 834-843 NN denotes induction
T4951 844-846 IN denotes of
T4952 847-852 NNP denotes Eomes
T4953 853-857 NNP denotes mRNA
T4954 858-861 CC denotes and
T4955 862-869 NN denotes protein
T4956 870-873 VBD denotes was
T4957 874-878 RB denotes only
T4958 879-887 VBN denotes observed
T4959 888-890 IN denotes at
T4960 891-894 NN denotes day
T4961 895-896 CD denotes 4
T4962 897-900 CC denotes and
T4963 901-906 RB denotes later
T4964 907-908 -LRB- denotes (
T4965 908-912 NNP denotes Fig.
T4966 913-914 CD denotes 1
T4967 914-915 , denotes ,
T4968 916-917 DT denotes A
T4969 918-921 CC denotes and
T4970 922-923 NNP denotes C
T4971 923-924 -RRB- denotes )
T4972 924-925 . denotes .
T4973 926-931 NNP denotes T-bet
T4974 932-936 NNP denotes mRNA
T4975 937-947 NN denotes expression
T4976 948-956 RB denotes slightly
T4977 957-965 VBD denotes preceded
T4978 966-969 DT denotes the
T4979 970-980 NN denotes expression
T4980 981-983 IN denotes of
T4981 984-988 NNP denotes GzmB
T4982 989-993 NNP denotes mRNA
T4983 993-994 : denotes ;
T4984 995-1004 RB denotes similarly
T4985 1004-1005 , denotes ,
T4986 1006-1011 NNP denotes Eomes
T4987 1012-1016 NNP denotes mRNA
T4988 1017-1020 CC denotes and
T4989 1021-1028 NN denotes protein
T4990 1029-1033 VBD denotes were
T4991 1034-1043 VBN denotes expressed
T4992 1044-1045 RB denotes ∼
T4993 1045-1046 CD denotes 1
T4994 1047-1048 LS denotes d
T4995 1049-1054 RB denotes ahead
T4996 1055-1057 IN denotes of
T4997 1058-1061 DT denotes the
T4998 1062-1074 NN denotes reexpression
T4999 1075-1077 IN denotes of
T5000 1078-1086 NN denotes perforin
T5001 1087-1091 NNP denotes mRNA
T5002 1092-1095 CC denotes and
T5003 1096-1103 NN denotes protein
T5004 1103-1104 , denotes ,
T5005 1105-1117 RB denotes respectively
T5006 1118-1119 -LRB- denotes (
T5007 1119-1123 NNP denotes Fig.
T5008 1124-1125 CD denotes 1
T5009 1125-1126 , denotes ,
T5010 1127-1128 NNP denotes B
T5011 1129-1132 CC denotes and
T5012 1133-1134 NNP denotes D
T5013 1134-1135 -RRB- denotes )
T5014 1135-1136 . denotes .
T5015 1137-1141 DT denotes This
T5016 1142-1150 JJ denotes detailed
T5017 1151-1158 JJ denotes kinetic
T5018 1159-1167 NN denotes analysis
T5019 1168-1177 VBD denotes suggested
T5020 1178-1182 IN denotes that
T5021 1182-1183 , denotes ,
T5022 1184-1189 IN denotes under
T5023 1190-1193 PRP$ denotes our
T5024 1194-1201 NN denotes culture
T5025 1202-1212 NNS denotes conditions
T5026 1212-1213 , denotes ,
T5027 1214-1219 NNP denotes T-bet
T5028 1220-1223 CC denotes and
T5029 1224-1229 NNP denotes Eomes
T5030 1230-1240 VBP denotes contribute
T5031 1241-1243 TO denotes to
T5032 1244-1252 JJ denotes distinct
T5033 1253-1260 NNS denotes aspects
T5034 1261-1263 IN denotes of
T5035 1264-1268 NN denotes gene
T5036 1269-1282 NN denotes transcription
T5037 1283-1289 IN denotes during
T5038 1290-1293 NNP denotes CTL
T5039 1294-1309 NN denotes differentiation
T5040 1309-1310 . denotes .
T5041 1311-1316 NN denotes T-bet
T5042 1317-1319 VBZ denotes is
T5043 1320-1328 VBN denotes required
T5044 1329-1334 RB denotes early
T5045 1335-1338 IN denotes for
T5046 1339-1344 JJ denotes IFN-γ
T5047 1345-1355 NN denotes production
T5048 1355-1356 , denotes ,
T5049 1357-1360 CC denotes and
T5050 1361-1364 PRP$ denotes our
T5051 1365-1369 NNS denotes data
T5052 1370-1379 VBD denotes suggested
T5053 1380-1384 IN denotes that
T5054 1385-1390 NNP denotes Eomes
T5055 1391-1396 MD denotes might
T5056 1397-1400 RB denotes not
T5057 1401-1409 VB denotes function
T5058 1410-1416 IN denotes during
T5059 1417-1421 DT denotes this
T5060 1422-1427 JJ denotes early
T5061 1428-1434 NN denotes period
T5062 1435-1438 CC denotes but
T5063 1439-1445 RB denotes rather
T5064 1446-1451 MD denotes might
T5065 1452-1462 VB denotes contribute
T5066 1463-1468 RB denotes later
T5067 1469-1471 TO denotes to
T5068 1472-1475 DT denotes the
T5069 1476-1483 NN denotes control
T5070 1484-1486 IN denotes of
T5071 1487-1495 NN denotes perforin
T5072 1496-1506 NN denotes expression
T5073 1506-1507 . denotes .
T5074 1508-1511 PRP$ denotes Our
T5075 1512-1516 NNS denotes data
T5076 1517-1523 VBD denotes seemed
T5077 1524-1528 RBS denotes most
T5078 1529-1539 JJ denotes consistent
T5079 1540-1544 IN denotes with
T5080 1545-1546 DT denotes a
T5081 1547-1552 NN denotes model
T5082 1553-1555 IN denotes in
T5083 1556-1561 WDT denotes which
T5084 1562-1565 NNP denotes TCR
T5085 1566-1573 VBZ denotes signals
T5086 1574-1580 VB denotes induce
T5087 1581-1586 NNP denotes T-bet
T5088 1586-1587 , denotes ,
T5089 1588-1593 WDT denotes which
T5090 1594-1596 IN denotes in
T5091 1597-1601 NN denotes turn
T5092 1602-1609 VBZ denotes induces
T5093 1610-1615 NNP denotes IFN-γ
T5094 1616-1617 -LRB- denotes (
T5095 1617-1619 CD denotes 17
T5096 1619-1620 -RRB- denotes )
T5097 1621-1624 CC denotes and
T5098 1625-1633 RB denotes possibly
T5099 1634-1642 VB denotes granzyme
T5100 1643-1644 NNP denotes B
T5101 1644-1645 : denotes ;
T5102 1646-1658 RB denotes subsequently
T5103 1658-1659 , denotes ,
T5104 1660-1665 NNP denotes Eomes
T5105 1666-1668 VBZ denotes is
T5106 1669-1676 VBN denotes induced
T5107 1677-1683 IN denotes during
T5108 1684-1687 DT denotes the
T5109 1688-1694 NN denotes period
T5110 1695-1697 IN denotes of
T5111 1698-1704 JJ denotes clonal
T5112 1705-1714 NN denotes expansion
T5113 1715-1717 IN denotes in
T5114 1718-1722 NN denotes IL-2
T5115 1723-1726 CC denotes and
T5116 1727-1736 VBZ denotes activates
T5117 1737-1745 JJ denotes perforin
T5118 1746-1756 NN denotes expression
T5119 1756-1757 . denotes .
R3731 T4777 T4778 amod Distinct,kinetics
R3732 T4778 T4783 nsubj kinetics,expression
R3733 T4779 T4778 prep of,kinetics
R3734 T4780 T4779 pobj T-bet,of
R3735 T4781 T4780 cc and,T-bet
R3736 T4782 T4780 conj Eomes,T-bet
R3737 T4783 T4783 ROOT expression,expression
R3738 T4784 T4783 prep during,expression
R3739 T4785 T4786 compound CTL,differentiation
R3740 T4786 T4784 pobj differentiation,during
R3741 T4787 T4790 det The,factors
R3742 T4788 T4790 amod T-box,factors
R3743 T4789 T4790 compound transcription,factors
R3744 T4790 T4796 nsubjpass factors,linked
R3745 T4791 T4796 nsubjpass T-bet,linked
R3746 T4792 T4791 cc and,T-bet
R3747 T4793 T4791 conj Eomes,T-bet
R3748 T4794 T4796 aux have,linked
R3749 T4795 T4796 auxpass been,linked
R3750 T4796 T4796 ROOT linked,linked
R3751 T4797 T4796 prep to,linked
R3752 T4798 T4799 det the,regulation
R3753 T4799 T4797 pobj regulation,to
R3754 T4800 T4799 prep of,regulation
R3755 T4801 T4800 pobj genes,of
R3756 T4802 T4801 acl encoding,genes
R3757 T4803 T4804 compound effector,cytokines
R3758 T4804 T4802 dobj cytokines,encoding
R3759 T4805 T4804 punct (,cytokines
R3760 T4806 T4804 appos e.g.,cytokines
R3761 T4807 T4806 punct ",",e.g.
R3762 T4808 T4806 amod Ifng,e.g.
R3763 T4809 T4804 punct ),cytokines
R3764 T4810 T4804 cc and,cytokines
R3765 T4811 T4804 conj genes,cytokines
R3766 T4812 T4804 amod important,cytokines
R3767 T4813 T4812 prep for,important
R3768 T4814 T4815 amod cytolytic,function
R3769 T4815 T4813 pobj function,for
R3770 T4816 T4817 punct (,e.g.
R3771 T4817 T4819 acl e.g.,Prf1
R3772 T4818 T4817 punct ",",e.g.
R3773 T4819 T4799 appos Prf1,regulation
R3774 T4820 T4819 cc and,Prf1
R3775 T4821 T4819 conj GzmB,Prf1
R3776 T4822 T4819 punct ),Prf1
R3777 T4823 T4819 punct (,Prf1
R3778 T4824 T4819 appos 20,Prf1
R3779 T4825 T4819 punct ),Prf1
R3780 T4826 T4796 punct .,linked
R3781 T4827 T4828 nsubj We,investigated
R3782 T4828 T4828 ROOT investigated,investigated
R3783 T4829 T4830 det the,kinetics
R3784 T4830 T4828 dobj kinetics,investigated
R3785 T4831 T4830 prep of,kinetics
R3786 T4832 T4831 pobj expression,of
R3787 T4833 T4832 prep of,expression
R3788 T4834 T4836 det these,factors
R3789 T4835 T4836 compound transcription,factors
R3790 T4836 T4833 pobj factors,of
R3791 T4837 T4830 prep in,kinetics
R3792 T4838 T4839 poss our,in
R3793 T4839 T4837 conj in,in
R3794 T4840 T4841 amod vitro,cultures
R3795 T4841 T4839 pobj cultures,in
R3796 T4842 T4830 punct (,kinetics
R3797 T4843 T4828 npadvmod Fig.,investigated
R3798 T4844 T4843 nummod 1,Fig.
R3799 T4845 T4843 punct ",",Fig.
R3800 T4846 T4847 det A,D
R3801 T4847 T4843 appos D,Fig.
R3802 T4848 T4847 punct ),D
R3803 T4849 T4843 punct .,Fig.
R3804 T4850 T4851 compound T-bet,mRNA
R3805 T4851 T4854 nsubj mRNA,were
R3806 T4852 T4851 cc and,mRNA
R3807 T4853 T4851 conj protein,mRNA
R3808 T4854 T4854 ROOT were,were
R3809 T4855 T4854 neg not,were
R3810 T4856 T4854 acomp detectable,were
R3811 T4857 T4856 prep in,detectable
R3812 T4858 T4862 amod naive,cells
R3813 T4859 T4862 nmod CD8,cells
R3814 T4860 T4862 nummod +,cells
R3815 T4861 T4862 compound T,cells
R3816 T4862 T4857 pobj cells,in
R3817 T4863 T4854 punct ",",were
R3818 T4864 T4854 cc but,were
R3819 T4865 T4867 auxpass were,induced
R3820 T4866 T4867 advmod strongly,induced
R3821 T4867 T4854 conj induced,were
R3822 T4868 T4867 prep upon,induced
R3823 T4869 T4870 compound TCR,priming
R3824 T4870 T4867 npadvmod priming,induced
R3825 T4871 T4872 punct (,day
R3826 T4872 T4870 parataxis day,priming
R3827 T4873 T4872 nummod 2,day
R3828 T4874 T4872 punct ),day
R3829 T4875 T4867 cc and,induced
R3830 T4876 T4867 conj remained,induced
R3831 T4877 T4867 conj expressed,induced
R3832 T4878 T4877 prep through,expressed
R3833 T4879 T4878 pobj day,through
R3834 T4880 T4879 nummod 6,day
R3835 T4881 T4879 prep of,day
R3836 T4882 T4881 pobj differentiation,of
R3837 T4883 T4887 punct (,A
R3838 T4884 T4887 intj Fig.,A
R3839 T4885 T4884 nummod 1,Fig.
R3840 T4886 T4884 punct ",",Fig.
R3841 T4887 T4877 parataxis A,expressed
R3842 T4888 T4887 cc and,A
R3843 T4889 T4887 conj C,A
R3844 T4890 T4891 punct ;,quantified
R3845 T4891 T4854 conj quantified,were
R3846 T4892 T4891 prep in,quantified
R3847 T4893 T4892 pobj Fig.,in
R3848 T4894 T4893 nummod 1,Fig.
R3849 T4895 T4893 punct ",",Fig.
R3850 T4896 T4893 conj B,Fig.
R3851 T4897 T4896 cc and,B
R3852 T4898 T4896 conj D,B
R3853 T4899 T4891 punct ),quantified
R3854 T4900 T4854 punct .,were
R3855 T4901 T4906 prep In,was
R3856 T4902 T4901 pobj contrast,In
R3857 T4903 T4906 punct ",",was
R3858 T4904 T4905 compound Eomes,expression
R3859 T4905 T4906 nsubj expression,was
R3860 T4906 T4906 ROOT was,was
R3861 T4907 T4906 acomp low,was
R3862 T4908 T4907 cc or,low
R3863 T4909 T4907 conj undetectable,low
R3864 T4910 T4906 prep at,was
R3865 T4911 T4913 preconj both,mRNA
R3866 T4912 T4913 det the,mRNA
R3867 T4913 T4926 nsubj mRNA,priming
R3868 T4914 T4913 cc and,mRNA
R3869 T4915 T4916 compound protein,levels
R3870 T4916 T4913 conj levels,mRNA
R3871 T4917 T4916 prep in,levels
R3872 T4918 T4922 amod naive,cells
R3873 T4919 T4922 nmod CD8,cells
R3874 T4920 T4922 nummod +,cells
R3875 T4921 T4922 compound T,cells
R3876 T4922 T4917 pobj cells,in
R3877 T4923 T4916 punct ",",levels
R3878 T4924 T4913 cc and,mRNA
R3879 T4925 T4913 conj TCR,mRNA
R3880 T4926 T4910 pcomp priming,at
R3881 T4927 T4926 prep in,priming
R3882 T4928 T4927 pobj culture,in
R3883 T4929 T4906 conj had,was
R3884 T4930 T4933 advmod only,effect
R3885 T4931 T4933 det a,effect
R3886 T4932 T4933 amod modest,effect
R3887 T4933 T4929 dobj effect,had
R3888 T4934 T4933 prep on,effect
R3889 T4935 T4936 poss its,expression
R3890 T4936 T4934 pobj expression,on
R3891 T4937 T4936 prep at,expression
R3892 T4938 T4937 pobj day,at
R3893 T4939 T4938 nummod 2,day
R3894 T4940 T4941 punct (,Fig.
R3895 T4941 T4938 appos Fig.,day
R3896 T4942 T4941 nummod 1,Fig.
R3897 T4943 T4941 punct ",",Fig.
R3898 T4944 T4941 conj A,Fig.
R3899 T4945 T4944 cc and,A
R3900 T4946 T4944 conj C,A
R3901 T4947 T4946 punct ),C
R3902 T4948 T4906 punct .,was
R3903 T4949 T4950 amod Strong,induction
R3904 T4950 T4958 nsubjpass induction,observed
R3905 T4951 T4950 prep of,induction
R3906 T4952 T4953 compound Eomes,mRNA
R3907 T4953 T4951 pobj mRNA,of
R3908 T4954 T4953 cc and,mRNA
R3909 T4955 T4958 nsubjpass protein,observed
R3910 T4956 T4958 auxpass was,observed
R3911 T4957 T4958 advmod only,observed
R3912 T4958 T4958 ROOT observed,observed
R3913 T4959 T4958 prep at,observed
R3914 T4960 T4959 pobj day,at
R3915 T4961 T4960 nummod 4,day
R3916 T4962 T4959 cc and,at
R3917 T4963 T4959 conj later,at
R3918 T4964 T4958 punct (,observed
R3919 T4965 T4958 npadvmod Fig.,observed
R3920 T4966 T4965 nummod 1,Fig.
R3921 T4967 T4965 punct ",",Fig.
R3922 T4968 T4965 conj A,Fig.
R3923 T4969 T4968 cc and,A
R3924 T4970 T4968 conj C,A
R3925 T4971 T4970 punct ),C
R3926 T4972 T4958 punct .,observed
R3927 T4973 T4974 compound T-bet,mRNA
R3928 T4974 T4975 compound mRNA,expression
R3929 T4975 T4977 nsubj expression,preceded
R3930 T4976 T4977 advmod slightly,preceded
R3931 T4977 T4991 ccomp preceded,expressed
R3932 T4978 T4979 det the,expression
R3933 T4979 T4977 dobj expression,preceded
R3934 T4980 T4979 prep of,expression
R3935 T4981 T4982 compound GzmB,mRNA
R3936 T4982 T4980 pobj mRNA,of
R3937 T4983 T4977 punct ;,preceded
R3938 T4984 T4991 advmod similarly,expressed
R3939 T4985 T4991 punct ",",expressed
R3940 T4986 T4987 compound Eomes,mRNA
R3941 T4987 T4991 nsubjpass mRNA,expressed
R3942 T4988 T4987 cc and,mRNA
R3943 T4989 T4987 conj protein,mRNA
R3944 T4990 T4991 auxpass were,expressed
R3945 T4991 T4991 ROOT expressed,expressed
R3946 T4992 T4991 advmod ∼,expressed
R3947 T4993 T4992 nummod 1,∼
R3948 T4994 T5006 meta d,(
R3949 T4995 T4994 advmod ahead,d
R3950 T4996 T4995 prep of,ahead
R3951 T4997 T4998 det the,reexpression
R3952 T4998 T4996 pobj reexpression,of
R3953 T4999 T4998 prep of,reexpression
R3954 T5000 T5001 compound perforin,mRNA
R3955 T5001 T4999 pobj mRNA,of
R3956 T5002 T5001 cc and,mRNA
R3957 T5003 T5001 conj protein,mRNA
R3958 T5004 T5005 punct ",",respectively
R3959 T5005 T4995 conj respectively,ahead
R3960 T5006 T5006 ROOT (,(
R3961 T5007 T5007 ROOT Fig.,Fig.
R3962 T5008 T5007 nummod 1,Fig.
R3963 T5009 T5010 punct ",",B
R3964 T5010 T5007 conj B,Fig.
R3965 T5011 T5010 cc and,B
R3966 T5012 T5010 conj D,B
R3967 T5013 T5007 punct ),Fig.
R3968 T5014 T5006 punct .,(
R3969 T5015 T5018 det This,analysis
R3970 T5016 T5018 amod detailed,analysis
R3971 T5017 T5018 amod kinetic,analysis
R3972 T5018 T5019 nsubj analysis,suggested
R3973 T5019 T5019 ROOT suggested,suggested
R3974 T5020 T5030 mark that,contribute
R3975 T5021 T5030 punct ",",contribute
R3976 T5022 T5030 prep under,contribute
R3977 T5023 T5025 poss our,conditions
R3978 T5024 T5025 compound culture,conditions
R3979 T5025 T5022 pobj conditions,under
R3980 T5026 T5030 punct ",",contribute
R3981 T5027 T5030 nsubj T-bet,contribute
R3982 T5028 T5027 cc and,T-bet
R3983 T5029 T5027 conj Eomes,T-bet
R3984 T5030 T5019 ccomp contribute,suggested
R3985 T5031 T5030 prep to,contribute
R3986 T5032 T5033 amod distinct,aspects
R3987 T5033 T5031 pobj aspects,to
R3988 T5034 T5033 prep of,aspects
R3989 T5035 T5036 compound gene,transcription
R3990 T5036 T5034 pobj transcription,of
R3991 T5037 T5031 prep during,to
R3992 T5038 T5039 compound CTL,differentiation
R3993 T5039 T5037 pobj differentiation,during
R3994 T5040 T5019 punct .,suggested
R3995 T5041 T5043 nsubjpass T-bet,required
R3996 T5042 T5043 auxpass is,required
R3997 T5043 T5043 ROOT required,required
R3998 T5044 T5043 advmod early,required
R3999 T5045 T5044 prep for,early
R4000 T5046 T5047 amod IFN-γ,production
R4001 T5047 T5045 pobj production,for
R4002 T5048 T5043 punct ",",required
R4003 T5049 T5043 cc and,required
R4004 T5050 T5051 poss our,data
R4005 T5051 T5052 nsubj data,suggested
R4006 T5052 T5043 conj suggested,required
R4007 T5053 T5057 mark that,function
R4008 T5054 T5057 nsubj Eomes,function
R4009 T5055 T5057 aux might,function
R4010 T5056 T5057 neg not,function
R4011 T5057 T5052 ccomp function,suggested
R4012 T5058 T5057 prep during,function
R4013 T5059 T5061 det this,period
R4014 T5060 T5061 amod early,period
R4015 T5061 T5058 pobj period,during
R4016 T5062 T5057 cc but,function
R4017 T5063 T5062 advmod rather,but
R4018 T5064 T5065 aux might,contribute
R4019 T5065 T5057 conj contribute,function
R4020 T5066 T5065 advmod later,contribute
R4021 T5067 T5066 prep to,later
R4022 T5068 T5069 det the,control
R4023 T5069 T5067 pobj control,to
R4024 T5070 T5069 prep of,control
R4025 T5071 T5072 compound perforin,expression
R4026 T5072 T5070 pobj expression,of
R4027 T5073 T5052 punct .,suggested
R4028 T5074 T5075 poss Our,data
R4029 T5075 T5076 nsubj data,seemed
R4030 T5076 T5106 ccomp seemed,induced
R4031 T5077 T5078 advmod most,consistent
R4032 T5078 T5076 oprd consistent,seemed
R4033 T5079 T5078 prep with,consistent
R4034 T5080 T5081 det a,model
R4035 T5081 T5079 pobj model,with
R4036 T5082 T5085 prep in,signals
R4037 T5083 T5082 pobj which,in
R4038 T5084 T5085 nsubj TCR,signals
R4039 T5085 T5086 nsubj signals,induce
R4040 T5086 T5076 ccomp induce,seemed
R4041 T5087 T5086 dobj T-bet,induce
R4042 T5088 T5087 punct ",",T-bet
R4043 T5089 T5092 nsubj which,induces
R4044 T5090 T5092 prep in,induces
R4045 T5091 T5090 pobj turn,in
R4046 T5092 T5087 relcl induces,T-bet
R4047 T5093 T5092 dobj IFN-γ,induces
R4048 T5094 T5093 punct (,IFN-γ
R4049 T5095 T5093 appos 17,IFN-γ
R4050 T5096 T5093 punct ),IFN-γ
R4051 T5097 T5092 cc and,induces
R4052 T5098 T5099 advmod possibly,granzyme
R4053 T5099 T5092 conj granzyme,induces
R4054 T5100 T5099 dobj B,granzyme
R4055 T5101 T5106 punct ;,induced
R4056 T5102 T5106 advmod subsequently,induced
R4057 T5103 T5106 punct ",",induced
R4058 T5104 T5106 nsubjpass Eomes,induced
R4059 T5105 T5106 auxpass is,induced
R4060 T5106 T5106 ROOT induced,induced
R4061 T5107 T5106 prep during,induced
R4062 T5108 T5109 det the,period
R4063 T5109 T5107 pobj period,during
R4064 T5110 T5109 prep of,period
R4065 T5111 T5112 amod clonal,expansion
R4066 T5112 T5110 pobj expansion,of
R4067 T5113 T5112 prep in,expansion
R4068 T5114 T5113 pobj IL-2,in
R4069 T5115 T5106 cc and,induced
R4070 T5116 T5106 conj activates,induced
R4071 T5117 T5118 amod perforin,expression
R4072 T5118 T5116 dobj expression,activates
R4073 T5119 T5106 punct .,induced

GO-BP

Id Subject Object Predicate Lexical cue
T4768 85-98 http://purl.obolibrary.org/obo/GO_0006351 denotes transcription
T4769 331-344 http://purl.obolibrary.org/obo/GO_0006351 denotes transcription
T4770 1269-1282 http://purl.obolibrary.org/obo/GO_0006351 denotes transcription
T4771 147-157 http://purl.obolibrary.org/obo/GO_0065007 denotes regulation
T4772 490-493 http://purl.obolibrary.org/obo/GO_0006283 denotes TCR
T4773 733-736 http://purl.obolibrary.org/obo/GO_0006283 denotes TCR
T4774 1562-1565 http://purl.obolibrary.org/obo/GO_0006283 denotes TCR
T4775 1566-1573 http://purl.obolibrary.org/obo/GO_0023052 denotes signals
T4776 1718-1736 http://purl.obolibrary.org/obo/GO_1900042 denotes IL-2 and activates

GO-MF

Id Subject Object Predicate Lexical cue
T5502 1718-1722 http://purl.obolibrary.org/obo/GO_0005134 denotes IL-2

GO-CC

Id Subject Object Predicate Lexical cue
T5503 452-457 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T5504 722-727 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T5505 490-493 http://purl.obolibrary.org/obo/GO_0042101 denotes TCR
T5506 733-736 http://purl.obolibrary.org/obo/GO_0042101 denotes TCR
T5507 1562-1565 http://purl.obolibrary.org/obo/GO_0042101 denotes TCR

sentences

Id Subject Object Predicate Lexical cue
T4758 0-74 Sentence denotes Distinct kinetics of T-bet and Eomes expression during CTL differentiation
T4759 75-278 Sentence denotes The T-box transcription factors T-bet and Eomes have been linked to the regulation of genes encoding effector cytokines (e.g., Ifng) and genes important for cytolytic function (e.g., Prf1 and GzmB) (20).
T4760 279-392 Sentence denotes We investigated the kinetics of expression of these transcription factors in our in vitro cultures (Fig. 1, A–D).
T4761 393-615 Sentence denotes T-bet mRNA and protein were not detectable in naive CD8+ T cells, but were strongly induced upon TCR priming (day 2) and remained expressed through day 6 of differentiation (Fig. 1, A and C; quantified in Fig. 1, B and D).
T4762 616-826 Sentence denotes In contrast, Eomes expression was low or undetectable at both the mRNA and protein levels in naive CD8+ T cells, and TCR priming in culture had only a modest effect on its expression at day 2 (Fig. 1, A and C).
T4763 827-925 Sentence denotes Strong induction of Eomes mRNA and protein was only observed at day 4 and later (Fig. 1, A and C).
T4764 926-1136 Sentence denotes T-bet mRNA expression slightly preceded the expression of GzmB mRNA; similarly, Eomes mRNA and protein were expressed ∼1 d ahead of the reexpression of perforin mRNA and protein, respectively (Fig. 1, B and D).
T4765 1137-1310 Sentence denotes This detailed kinetic analysis suggested that, under our culture conditions, T-bet and Eomes contribute to distinct aspects of gene transcription during CTL differentiation.
T4766 1311-1507 Sentence denotes T-bet is required early for IFN-γ production, and our data suggested that Eomes might not function during this early period but rather might contribute later to the control of perforin expression.
T4767 1508-1757 Sentence denotes Our data seemed most consistent with a model in which TCR signals induce T-bet, which in turn induces IFN-γ (17) and possibly granzyme B; subsequently, Eomes is induced during the period of clonal expansion in IL-2 and activates perforin expression.
T56 0-74 Sentence denotes Distinct kinetics of T-bet and Eomes expression during CTL differentiation
T57 75-278 Sentence denotes The T-box transcription factors T-bet and Eomes have been linked to the regulation of genes encoding effector cytokines (e.g., Ifng) and genes important for cytolytic function (e.g., Prf1 and GzmB) (20).
T58 279-392 Sentence denotes We investigated the kinetics of expression of these transcription factors in our in vitro cultures (Fig. 1, A–D).
T59 393-615 Sentence denotes T-bet mRNA and protein were not detectable in naive CD8+ T cells, but were strongly induced upon TCR priming (day 2) and remained expressed through day 6 of differentiation (Fig. 1, A and C; quantified in Fig. 1, B and D).
T60 616-826 Sentence denotes In contrast, Eomes expression was low or undetectable at both the mRNA and protein levels in naive CD8+ T cells, and TCR priming in culture had only a modest effect on its expression at day 2 (Fig. 1, A and C).
T61 827-925 Sentence denotes Strong induction of Eomes mRNA and protein was only observed at day 4 and later (Fig. 1, A and C).
T62 926-1136 Sentence denotes T-bet mRNA expression slightly preceded the expression of GzmB mRNA; similarly, Eomes mRNA and protein were expressed ∼1 d ahead of the reexpression of perforin mRNA and protein, respectively (Fig. 1, B and D).
T63 1137-1310 Sentence denotes This detailed kinetic analysis suggested that, under our culture conditions, T-bet and Eomes contribute to distinct aspects of gene transcription during CTL differentiation.
T64 1311-1507 Sentence denotes T-bet is required early for IFN-γ production, and our data suggested that Eomes might not function during this early period but rather might contribute later to the control of perforin expression.
T65 1508-1757 Sentence denotes Our data seemed most consistent with a model in which TCR signals induce T-bet, which in turn induces IFN-γ (17) and possibly granzyme B; subsequently, Eomes is induced during the period of clonal expansion in IL-2 and activates perforin expression.

events-check-again

Id Subject Object Predicate Lexical cue Negation Speculation
T5801 21-26 Protein denotes T-bet
T5802 31-36 Protein denotes Eomes
T5803 37-47 Gene_expression denotes expression
T5804 37-47 Gene_expression denotes expression
T5805 107-112 Protein denotes T-bet
T5806 117-122 Protein denotes Eomes
T5807 133-139 Regulation denotes linked
T5808 133-139 Regulation denotes linked
T5809 133-139 Regulation denotes linked
T5810 133-139 Regulation denotes linked
T5811 133-139 Regulation denotes linked
T5812 133-139 Regulation denotes linked
T5813 147-157 Regulation denotes regulation
T5814 147-157 Regulation denotes regulation
T5815 147-157 Regulation denotes regulation
T5816 202-206 Protein denotes Ifng
T5817 258-262 Protein denotes Prf1
T5818 267-271 Protein denotes GzmB
T5819 311-321 Gene_expression denotes expression true
T5820 311-321 Gene_expression denotes expression true
T5821 393-398 Protein denotes T-bet
T5822 425-435 Gene_expression denotes detectable true
T5823 445-448 Protein denotes CD8
T5824 477-484 Positive_regulation denotes induced
T5825 514-522 Positive_regulation denotes remained
T5826 523-532 Gene_expression denotes expressed
T5827 629-634 Protein denotes Eomes
T5828 635-645 Gene_expression denotes expression
T5829 650-669 Positive_regulation denotes low or undetectable true
T5830 715-718 Protein denotes CD8
T5831 774-780 Regulation denotes effect true
T5832 788-798 Gene_expression denotes expression
T5833 834-843 Positive_regulation denotes induction
T5834 847-852 Protein denotes Eomes
T5835 926-931 Protein denotes T-bet
T5836 932-947 Transcription denotes mRNA expression
T5837 970-980 Gene_expression denotes expression
T5838 984-988 Protein denotes GzmB
T5839 1006-1011 Protein denotes Eomes
T5840 1034-1043 Gene_expression denotes expressed
T5841 1062-1074 Gene_expression denotes reexpression
T5842 1078-1086 Protein denotes perforin
T5843 1214-1219 Protein denotes T-bet
T5844 1224-1229 Protein denotes Eomes
T5845 1311-1316 Protein denotes T-bet
T5846 1320-1328 Positive_regulation denotes required
T5847 1339-1344 Protein denotes IFN-γ
T5848 1345-1355 Gene_expression denotes production
T5849 1385-1390 Protein denotes Eomes
T5850 1452-1462 Positive_regulation denotes contribute true
T5851 1476-1483 Regulation denotes control
T5852 1487-1495 Protein denotes perforin
T5853 1496-1506 Gene_expression denotes expression
T5854 1574-1580 Positive_regulation denotes induce
T5855 1581-1586 Protein denotes T-bet
T5856 1602-1609 Positive_regulation denotes induces
T5857 1602-1609 Positive_regulation denotes induces
T5858 1610-1615 Protein denotes IFN-γ
T5859 1634-1644 Protein denotes granzyme B
T5860 1660-1665 Protein denotes Eomes
T5861 1669-1676 Positive_regulation denotes induced
T5862 1718-1722 Protein denotes IL-2
T5863 1727-1736 Positive_regulation denotes activates
T5864 1737-1745 Protein denotes perforin
T5865 1746-1756 Gene_expression denotes expression
R4618 T5801 T5804 themeOf T-bet,expression
R4619 T5802 T5803 themeOf Eomes,expression
R4620 T5805 T5812 causeOf T-bet,linked
R4621 T5805 T5807 causeOf T-bet,linked
R4622 T5805 T5810 causeOf T-bet,linked
R4623 T5805 T5820 themeOf T-bet,expression
R4624 T5806 T5808 causeOf Eomes,linked
R4625 T5806 T5809 causeOf Eomes,linked
R4626 T5806 T5811 causeOf Eomes,linked
R4627 T5806 T5819 themeOf Eomes,expression
R4628 T5813 T5812 themeOf regulation,linked
R4629 T5813 T5808 themeOf regulation,linked
R4630 T5814 T5810 themeOf regulation,linked
R4631 T5814 T5811 themeOf regulation,linked
R4632 T5815 T5807 themeOf regulation,linked
R4633 T5815 T5809 themeOf regulation,linked
R4634 T5816 T5813 themeOf Ifng,regulation
R4635 T5817 T5815 themeOf Prf1,regulation
R4636 T5818 T5814 themeOf GzmB,regulation
R4637 T5821 T5822 themeOf T-bet,detectable
R4638 T5821 T5824 themeOf T-bet,induced
R4639 T5821 T5826 themeOf T-bet,expressed
R4640 T5826 T5825 themeOf expressed,remained
R4641 T5827 T5828 themeOf Eomes,expression
R4642 T5827 T5832 themeOf Eomes,expression
R4643 T5828 T5829 themeOf expression,low or undetectable
R4644 T5832 T5831 themeOf expression,effect
R4645 T5834 T5833 themeOf Eomes,induction
R4646 T5835 T5836 themeOf T-bet,mRNA expression
R4647 T5838 T5837 themeOf GzmB,expression
R4648 T5839 T5840 themeOf Eomes,expressed
R4649 T5842 T5841 themeOf perforin,reexpression
R4650 T5845 T5846 causeOf T-bet,required
R4651 T5847 T5848 themeOf IFN-γ,production
R4652 T5848 T5846 themeOf production,required
R4653 T5849 T5850 causeOf Eomes,contribute
R4654 T5851 T5850 themeOf control,contribute
R4655 T5852 T5853 themeOf perforin,expression
R4656 T5853 T5851 themeOf expression,control
R4657 T5855 T5854 themeOf T-bet,induce
R4658 T5855 T5857 causeOf T-bet,induces
R4659 T5855 T5856 causeOf T-bet,induces
R4660 T5858 T5857 themeOf IFN-γ,induces
R4661 T5859 T5856 themeOf granzyme B,induces
R4662 T5860 T5861 themeOf Eomes,induced
R4663 T5860 T5863 causeOf Eomes,activates
R4664 T5864 T5865 themeOf perforin,expression
R4665 T5865 T5863 themeOf expression,activates

bionlp-st-ge-2016-reference-tees

Id Subject Object Predicate Lexical cue
T5866 258-262 Protein denotes Prf1
T5867 267-271 Protein denotes GzmB
T5868 147-157 Regulation denotes regulation
T5869 147-157 Regulation denotes regulation
T5870 445-449 Protein denotes CD8+
T5871 490-493 Protein denotes TCR
T5872 715-719 Protein denotes CD8+
T5873 733-736 Protein denotes TCR
T5874 788-798 Gene_expression denotes expression
T5875 774-780 Regulation denotes effect
T5876 847-857 Protein denotes Eomes mRNA
T5877 834-843 Positive_regulation denotes induction
T5878 984-993 Protein denotes GzmB mRNA
T5879 1006-1016 Protein denotes Eomes mRNA
T5880 1078-1091 Protein denotes perforin mRNA
T5881 970-980 Gene_expression denotes expression
T5882 1034-1043 Gene_expression denotes expressed
T5883 1062-1074 Gene_expression denotes reexpression
T5884 957-965 Positive_regulation denotes preceded
T5885 1339-1344 Protein denotes IFN-γ
T5886 1487-1495 Protein denotes perforin
T5887 1345-1355 Gene_expression denotes production
T5888 1496-1506 Gene_expression denotes expression
T5889 1320-1328 Positive_regulation denotes required
T5890 1476-1483 Regulation denotes control
T5891 1452-1462 Positive_regulation denotes contribute
T5892 1562-1565 Protein denotes TCR
T5893 1610-1615 Protein denotes IFN-γ
T5894 1718-1722 Protein denotes IL-2
T5895 1737-1745 Protein denotes perforin
T5896 1574-1580 Positive_regulation denotes induce
T5897 1602-1609 Positive_regulation denotes induces
T5898 1746-1756 Gene_expression denotes expression
T5899 1727-1736 Positive_regulation denotes activates
R4666 T5866 T5868 themeOf Prf1,regulation
R4667 T5867 T5869 themeOf GzmB,regulation
R4668 T5873 T5874 themeOf TCR,expression
R4669 T5874 T5875 themeOf expression,effect
R4670 T5876 T5877 themeOf Eomes mRNA,induction
R4671 T5878 T5881 themeOf GzmB mRNA,expression
R4672 T5879 T5882 themeOf Eomes mRNA,expressed
R4673 T5880 T5883 themeOf perforin mRNA,reexpression
R4674 T5881 T5884 themeOf expression,preceded
R4675 T5885 T5887 themeOf IFN-γ,production
R4676 T5886 T5888 themeOf perforin,expression
R4677 T5887 T5889 themeOf production,required
R4678 T5888 T5890 themeOf expression,control
R4679 T5890 T5891 themeOf control,contribute
R4680 T5892 T5896 themeOf TCR,induce
R4681 T5893 T5897 themeOf IFN-γ,induces
R4682 T5895 T5898 themeOf perforin,expression
R4683 T5898 T5899 themeOf expression,activates

bionlp-st-ge-2016-reference

Id Subject Object Predicate Lexical cue Negation Speculation
T4693 21-26 Protein denotes T-bet
T4694 31-36 Protein denotes Eomes
T4695 37-47 Gene_expression denotes expression
T4696 37-47 Gene_expression denotes expression
T4697 107-112 Protein denotes T-bet
T4698 117-122 Protein denotes Eomes
T4699 133-139 Regulation denotes linked
T4700 133-139 Regulation denotes linked
T4701 133-139 Regulation denotes linked
T4702 133-139 Regulation denotes linked
T4703 133-139 Regulation denotes linked
T4704 133-139 Regulation denotes linked
T4705 147-157 Regulation denotes regulation
T4706 147-157 Regulation denotes regulation
T4707 147-157 Regulation denotes regulation
T4708 202-206 Protein denotes Ifng
T4709 258-262 Protein denotes Prf1
T4710 267-271 Protein denotes GzmB
T4711 311-321 Gene_expression denotes expression true
T4712 311-321 Gene_expression denotes expression true
T4713 393-398 Protein denotes T-bet
T4714 425-435 Gene_expression denotes detectable true
T4715 445-448 Protein denotes CD8
T4716 477-484 Positive_regulation denotes induced
T4717 514-522 Positive_regulation denotes remained
T4718 523-532 Gene_expression denotes expressed
T4719 629-634 Protein denotes Eomes
T4720 635-645 Gene_expression denotes expression
T4721 650-669 Positive_regulation denotes low or undetectable true
T4722 715-718 Protein denotes CD8
T4723 774-780 Regulation denotes effect true
T4724 788-798 Gene_expression denotes expression
T4725 834-843 Positive_regulation denotes induction
T4726 847-852 Protein denotes Eomes
T4727 926-931 Protein denotes T-bet
T4728 932-947 Transcription denotes mRNA expression
T4729 970-980 Gene_expression denotes expression
T4730 984-988 Protein denotes GzmB
T4731 1006-1011 Protein denotes Eomes
T4732 1034-1043 Gene_expression denotes expressed
T4733 1062-1074 Gene_expression denotes reexpression
T4734 1078-1086 Protein denotes perforin
T4735 1214-1219 Protein denotes T-bet
T4736 1224-1229 Protein denotes Eomes
T4737 1311-1316 Protein denotes T-bet
T4738 1320-1328 Positive_regulation denotes required
T4739 1339-1344 Protein denotes IFN-γ
T4740 1345-1355 Gene_expression denotes production
T4741 1385-1390 Protein denotes Eomes
T4742 1452-1462 Positive_regulation denotes contribute true
T4743 1476-1483 Regulation denotes control
T4744 1487-1495 Protein denotes perforin
T4745 1496-1506 Gene_expression denotes expression
T4746 1574-1580 Positive_regulation denotes induce
T4747 1581-1586 Protein denotes T-bet
T4748 1602-1609 Positive_regulation denotes induces
T4749 1602-1609 Positive_regulation denotes induces
T4750 1610-1615 Protein denotes IFN-γ
T4751 1634-1644 Protein denotes granzyme B
T4752 1660-1665 Protein denotes Eomes
T4753 1669-1676 Positive_regulation denotes induced
T4754 1718-1722 Protein denotes IL-2
T4755 1727-1736 Positive_regulation denotes activates
T4756 1737-1745 Protein denotes perforin
T4757 1746-1756 Gene_expression denotes expression
R3712 T4730 T4729 themeOf GzmB,expression
R3713 T4731 T4732 themeOf Eomes,expressed
R3714 T4734 T4733 themeOf perforin,reexpression
R3715 T4737 T4738 causeOf T-bet,required
R3716 T4739 T4740 themeOf IFN-γ,production
R3717 T4740 T4738 themeOf production,required
R3718 T4741 T4742 causeOf Eomes,contribute
R3719 T4743 T4742 themeOf control,contribute
R3720 T4744 T4745 themeOf perforin,expression
R3721 T4745 T4743 themeOf expression,control
R3722 T4747 T4746 themeOf T-bet,induce
R3723 T4747 T4749 causeOf T-bet,induces
R3724 T4747 T4748 causeOf T-bet,induces
R3725 T4750 T4749 themeOf IFN-γ,induces
R3726 T4751 T4748 themeOf granzyme B,induces
R3727 T4752 T4753 themeOf Eomes,induced
R3730 T4757 T4755 themeOf expression,activates
R3684 T4694 T4695 themeOf Eomes,expression
R3685 T4697 T4704 causeOf T-bet,linked
R3686 T4697 T4699 causeOf T-bet,linked
R3687 T4697 T4702 causeOf T-bet,linked
R3688 T4697 T4712 themeOf T-bet,expression
R3689 T4698 T4700 causeOf Eomes,linked
R3690 T4698 T4701 causeOf Eomes,linked
R3691 T4698 T4703 causeOf Eomes,linked
R3692 T4698 T4711 themeOf Eomes,expression
R3693 T4705 T4704 themeOf regulation,linked
R3694 T4705 T4700 themeOf regulation,linked
R3695 T4706 T4702 themeOf regulation,linked
R3696 T4706 T4703 themeOf regulation,linked
R3697 T4707 T4699 themeOf regulation,linked
R3698 T4707 T4701 themeOf regulation,linked
R3699 T4708 T4705 themeOf Ifng,regulation
R3700 T4709 T4707 themeOf Prf1,regulation
R3701 T4710 T4706 themeOf GzmB,regulation
R3702 T4713 T4714 themeOf T-bet,detectable
R3703 T4713 T4716 themeOf T-bet,induced
R3704 T4713 T4718 themeOf T-bet,expressed
R3705 T4718 T4717 themeOf expressed,remained
R3706 T4719 T4720 themeOf Eomes,expression
R3707 T4719 T4724 themeOf Eomes,expression
R3708 T4720 T4721 themeOf expression,low or undetectable
R3709 T4724 T4723 themeOf expression,effect
R3710 T4726 T4725 themeOf Eomes,induction
R3711 T4727 T4728 themeOf T-bet,mRNA expression
R3683 T4693 T4696 themeOf T-bet,expression
R3728 T4752 T4755 causeOf Eomes,activates
R3729 T4756 T4757 themeOf perforin,expression

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T5462 21-26 Q9UL17 denotes T-bet
T5463 31-36 O95936 denotes Eomes
T5464 107-112 Q9UL17 denotes T-bet
T5465 117-122 O95936 denotes Eomes
T5466 202-206 P01579 denotes Ifng
T5467 258-262 P14222 denotes Prf1
T5468 267-271 P10144 denotes GzmB
T5469 393-398 Q9UL17 denotes T-bet
T5470 445-448 P01732 denotes CD8
T5471 445-448 P10966 denotes CD8
T5472 629-634 O95936 denotes Eomes
T5473 715-718 P01732 denotes CD8
T5474 715-718 P10966 denotes CD8
T5475 847-852 O95936 denotes Eomes
T5476 926-931 Q9UL17 denotes T-bet
T5477 984-988 P10144 denotes GzmB
T5478 1006-1011 O95936 denotes Eomes
T5479 1078-1086 P14222 denotes perforin
T5480 1214-1219 Q9UL17 denotes T-bet
T5481 1224-1229 O95936 denotes Eomes
T5482 1311-1316 Q9UL17 denotes T-bet
T5483 1339-1344 P01579 denotes IFN-γ
T5484 1385-1390 O95936 denotes Eomes
T5485 1487-1495 P14222 denotes perforin
T5486 1581-1586 Q9UL17 denotes T-bet
T5487 1610-1615 P01579 denotes IFN-γ
T5488 1634-1644 P10144 denotes granzyme B
T5489 1660-1665 O95936 denotes Eomes
T5490 1718-1722 P60568 denotes IL-2
T5491 1737-1745 P14222 denotes perforin

test2

Id Subject Object Predicate Lexical cue Negation Speculation
T4644 21-26 Protein denotes T-bet
T4645 31-36 Protein denotes Eomes
T4646 37-47 Gene_expression denotes expression
T4647 107-112 Protein denotes T-bet
T4648 117-122 Protein denotes Eomes
T4649 202-206 Protein denotes Ifng
T4650 258-262 Protein denotes Prf1
T4651 267-271 Protein denotes GzmB
T4652 393-398 Protein denotes T-bet
T4653 445-448 Protein denotes CD8
T4654 477-484 Positive_regulation denotes induced
T4655 523-532 Gene_expression denotes expressed true
T4656 629-634 Protein denotes Eomes true
T4657 635-645 Gene_expression denotes expression true
T4658 715-718 Protein denotes CD8
T4659 788-798 Gene_expression denotes expression
T4660 834-843 Positive_regulation denotes induction
T4661 847-852 Protein denotes Eomes
T4662 926-931 Protein denotes T-bet true
T4663 932-947 Transcription denotes mRNA expression true
T4664 957-965 Positive_regulation denotes preceded
T4665 970-980 Gene_expression denotes expression
T4666 984-988 Protein denotes GzmB
T4667 1006-1011 Protein denotes Eomes
T4668 1034-1043 Gene_expression denotes expressed
T4669 1062-1074 Gene_expression denotes reexpression
T4670 1078-1086 Protein denotes perforin
T4671 1214-1219 Protein denotes T-bet
T4672 1224-1229 Protein denotes Eomes true
T4673 1311-1316 Protein denotes T-bet
T4674 1320-1328 Positive_regulation denotes required
T4675 1339-1344 Protein denotes IFN-γ
T4676 1345-1355 Gene_expression denotes production
T4677 1385-1390 Protein denotes Eomes
T4678 1452-1462 Positive_regulation denotes contribute
T4679 1476-1483 Regulation denotes control
T4680 1487-1495 Protein denotes perforin
T4681 1496-1506 Gene_expression denotes expression
T4682 1574-1580 Positive_regulation denotes induce
T4683 1581-1586 Protein denotes T-bet
T4684 1602-1609 Positive_regulation denotes induces
T4685 1610-1615 Protein denotes IFN-γ
T4686 1634-1644 Protein denotes granzyme B
T4687 1660-1665 Protein denotes Eomes
T4688 1669-1676 Positive_regulation denotes induced
T4689 1718-1722 Protein denotes IL-2
T4690 1727-1736 Positive_regulation denotes activates
T4691 1737-1745 Protein denotes perforin
T4692 1746-1756 Gene_expression denotes expression
R3657 T4644 T4646 themeOf T-bet,expression
R3658 T4645 T4646 themeOf Eomes,expression
R3659 T4652 T4655 themeOf T-bet,expressed
R3660 T4652 T4654 themeOf T-bet,induced
R3661 T4656 T4657 themeOf Eomes,expression
R3662 T4656 T4659 themeOf Eomes,expression
R3663 T4661 T4660 themeOf Eomes,induction
R3664 T4662 T4663 themeOf T-bet,mRNA expression
R3665 T4665 T4664 themeOf expression,preceded
R3666 T4666 T4665 themeOf GzmB,expression
R3667 T4667 T4668 themeOf Eomes,expressed
R3668 T4670 T4669 themeOf perforin,reexpression
R3669 T4673 T4674 causeOf T-bet,required
R3670 T4675 T4676 themeOf IFN-γ,production
R3671 T4676 T4674 themeOf production,required
R3672 T4677 T4678 causeOf Eomes,contribute
R3673 T4680 T4681 themeOf perforin,expression
R3674 T4681 T4679 themeOf expression,control
R3675 T4683 T4682 themeOf T-bet,induce
R3676 T4683 T4684 causeOf T-bet,induces
R3677 T4685 T4684 themeOf IFN-γ,induces
R3678 T4686 T4684 themeOf granzyme B,induces
R3679 T4687 T4688 themeOf Eomes,induced
R3680 T4687 T4690 causeOf Eomes,activates
R3681 T4691 T4692 themeOf perforin,expression
R3682 T4692 T4690 themeOf expression,activates