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PMC:2626671 / 8680-8993 JSONTXT

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pmc-enju-pas

Id Subject Object Predicate Lexical cue
T4186 0-5 DT denotes These
T4187 6-13 NN denotes results
T4188 14-18 VB denotes show
T4189 19-23 IN denotes that
T4190 24-29 IN denotes after
T4191 30-31 DT denotes a
T4192 32-38 JJ denotes strong
T4193 39-46 NN denotes priming
T4194 47-55 NN denotes stimulus
T4195 56-63 IN denotes through
T4196 64-68 NN denotes TCRs
T4197 69-72 CC denotes and
T4198 73-87 JJ denotes co-stimulatory
T4199 88-97 NN denotes receptors
T4200 98-100 FW denotes in
T4201 101-106 FW denotes vitro
T4202 106-107 -COMMA- denotes ,
T4203 108-116 NN denotes granzyme
T4204 117-118 NN denotes B
T4205 119-129 NN denotes expression
T4206 130-133 CC denotes and
T4207 134-137 DT denotes the
T4208 138-145 NN denotes ability
T4209 146-148 TO denotes to
T4210 149-156 VB denotes produce
T4211 157-165 NN denotes effector
T4212 166-175 NN denotes cytokines
T4213 176-179 VB denotes are
T4214 180-190 VB denotes programmed
T4215 191-196 RB denotes early
T4216 196-197 -COMMA- denotes ,
T4217 198-205 IN denotes whereas
T4218 206-214 NN denotes perforin
T4219 215-225 NN denotes expression
T4220 226-229 CC denotes and
T4221 230-239 JJ denotes cytolytic
T4222 240-248 NN denotes function
T4223 249-252 VB denotes are
T4224 253-260 VB denotes induced
T4225 261-266 RB denotes later
T4226 266-267 -COMMA- denotes ,
T4227 268-274 IN denotes during
T4228 275-278 DT denotes the
T4229 279-284 NN denotes phase
T4230 285-287 IN denotes of
T4231 288-294 JJ denotes clonal
T4232 295-304 NN denotes expansion
T4233 305-307 IN denotes in
T4234 308-312 NN denotes IL-2
R3374 T4187 T4186 arg1Of results,These
R3375 T4187 T4188 arg1Of results,show
R3376 T4194 T4190 arg2Of stimulus,after
R3377 T4194 T4191 arg1Of stimulus,a
R3378 T4194 T4192 arg1Of stimulus,strong
R3379 T4194 T4193 arg1Of stimulus,priming
R3380 T4194 T4195 arg1Of stimulus,through
R3381 T4196 T4197 arg1Of TCRs,and
R3382 T4197 T4195 arg2Of and,through
R3383 T4197 T4201 arg1Of and,vitro
R3384 T4199 T4197 arg2Of receptors,and
R3385 T4199 T4198 arg1Of receptors,co-stimulatory
R3386 T4201 T4200 arg1Of vitro,in
R3387 T4205 T4203 arg1Of expression,granzyme
R3388 T4205 T4204 arg1Of expression,B
R3389 T4205 T4206 arg1Of expression,and
R3390 T4206 T4213 arg1Of and,are
R3391 T4206 T4214 arg2Of and,programmed
R3392 T4208 T4206 arg2Of ability,and
R3393 T4208 T4207 arg1Of ability,the
R3394 T4208 T4209 modOf ability,to
R3395 T4210 T4209 arg1Of produce,to
R3396 T4212 T4210 arg2Of cytokines,produce
R3397 T4212 T4211 arg1Of cytokines,effector
R3398 T4214 T4188 arg2Of programmed,show
R3399 T4214 T4189 arg1Of programmed,that
R3400 T4214 T4190 arg1Of programmed,after
R3401 T4214 T4202 arg1Of programmed,","
R3402 T4214 T4213 arg2Of programmed,are
R3403 T4214 T4215 arg1Of programmed,early
R3404 T4214 T4216 arg1Of programmed,","
R3405 T4214 T4217 arg1Of programmed,whereas
R3406 T4214 T4226 arg1Of programmed,","
R3407 T4214 T4227 arg1Of programmed,during
R3408 T4219 T4218 arg1Of expression,perforin
R3409 T4219 T4220 arg1Of expression,and
R3410 T4220 T4223 arg1Of and,are
R3411 T4220 T4224 arg2Of and,induced
R3412 T4222 T4220 arg2Of function,and
R3413 T4222 T4221 arg1Of function,cytolytic
R3414 T4224 T4217 arg2Of induced,whereas
R3415 T4224 T4223 arg2Of induced,are
R3416 T4224 T4225 arg1Of induced,later
R3417 T4229 T4227 arg2Of phase,during
R3418 T4229 T4228 arg1Of phase,the
R3419 T4229 T4230 arg1Of phase,of
R3420 T4232 T4230 arg2Of expansion,of
R3421 T4232 T4231 arg1Of expansion,clonal
R3422 T4232 T4233 arg1Of expansion,in
R3423 T4234 T4233 arg2Of IL-2,in

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T3754 0-5 DT denotes These
T3755 6-13 NNS denotes results
T3756 14-18 VBP denotes show
T3757 19-23 IN denotes that
T3758 24-29 IN denotes after
T3759 30-31 DT denotes a
T3760 32-38 JJ denotes strong
T3761 39-46 NN denotes priming
T3762 47-55 NN denotes stimulus
T3763 56-63 IN denotes through
T3764 64-68 NNS denotes TCRs
T3765 69-72 CC denotes and
T3766 73-87 JJ denotes co-stimulatory
T3767 88-97 NNS denotes receptors
T3768 98-100 IN denotes in
T3769 101-106 NN denotes vitro
T3770 106-107 , denotes ,
T3771 108-116 NN denotes granzyme
T3772 117-118 NNP denotes B
T3773 119-129 NN denotes expression
T3774 130-133 CC denotes and
T3775 134-137 DT denotes the
T3776 138-145 NN denotes ability
T3777 146-148 TO denotes to
T3778 149-156 VB denotes produce
T3779 157-165 NN denotes effector
T3780 166-175 NNS denotes cytokines
T3781 176-179 VBP denotes are
T3782 180-190 VBN denotes programmed
T3783 191-196 RB denotes early
T3784 196-197 , denotes ,
T3785 198-205 IN denotes whereas
T3786 206-214 NN denotes perforin
T3787 215-225 NN denotes expression
T3788 226-229 CC denotes and
T3789 230-239 JJ denotes cytolytic
T3790 240-248 NN denotes function
T3791 249-252 VBP denotes are
T3792 253-260 JJ denotes induced
T3793 261-266 RB denotes later
T3794 266-267 , denotes ,
T3795 268-274 IN denotes during
T3796 275-278 DT denotes the
T3797 279-284 NN denotes phase
T3798 285-287 IN denotes of
T3799 288-294 JJ denotes clonal
T3800 295-304 NN denotes expansion
T3801 305-307 IN denotes in
T3802 308-312 NN denotes IL-2
T3803 312-313 . denotes .
R2938 T3754 T3755 det These,results
R2939 T3755 T3756 nsubj results,show
R2940 T3756 T3756 ROOT show,show
R2941 T3757 T3782 mark that,programmed
R2942 T3758 T3782 prep after,programmed
R2943 T3759 T3762 det a,stimulus
R2944 T3760 T3762 amod strong,stimulus
R2945 T3761 T3762 amod priming,stimulus
R2946 T3762 T3758 pobj stimulus,after
R2947 T3763 T3762 prep through,stimulus
R2948 T3764 T3763 pobj TCRs,through
R2949 T3765 T3764 cc and,TCRs
R2950 T3766 T3767 amod co-stimulatory,receptors
R2951 T3767 T3764 conj receptors,TCRs
R2952 T3768 T3762 prep in,stimulus
R2953 T3769 T3773 amod vitro,expression
R2954 T3770 T3773 punct ",",expression
R2955 T3771 T3773 amod granzyme,expression
R2956 T3772 T3773 compound B,expression
R2957 T3773 T3768 pobj expression,in
R2958 T3774 T3773 cc and,expression
R2959 T3775 T3776 det the,ability
R2960 T3776 T3773 conj ability,expression
R2961 T3777 T3778 aux to,produce
R2962 T3778 T3776 acl produce,ability
R2963 T3779 T3780 compound effector,cytokines
R2964 T3780 T3782 nsubjpass cytokines,programmed
R2965 T3781 T3782 auxpass are,programmed
R2966 T3782 T3756 ccomp programmed,show
R2967 T3783 T3782 advmod early,programmed
R2968 T3784 T3782 punct ",",programmed
R2969 T3785 T3792 mark whereas,induced
R2970 T3786 T3787 amod perforin,expression
R2971 T3787 T3792 nsubjpass expression,induced
R2972 T3788 T3787 cc and,expression
R2973 T3789 T3790 amod cytolytic,function
R2974 T3790 T3787 conj function,expression
R2975 T3791 T3792 auxpass are,induced
R2976 T3792 T3782 advcl induced,programmed
R2977 T3793 T3792 advmod later,induced
R2978 T3794 T3792 punct ",",induced
R2979 T3795 T3792 prep during,induced
R2980 T3796 T3797 det the,phase
R2981 T3797 T3795 pobj phase,during
R2982 T3798 T3797 prep of,phase
R2983 T3799 T3800 amod clonal,expansion
R2984 T3800 T3798 pobj expansion,of
R2985 T3801 T3800 prep in,expansion
R2986 T3802 T3801 pobj IL-2,in
R2987 T3803 T3756 punct .,show

GO-MF

Id Subject Object Predicate Lexical cue
T4298 308-312 http://purl.obolibrary.org/obo/GO_0005134 denotes IL-2

sentences

Id Subject Object Predicate Lexical cue
T3378 0-313 Sentence denotes These results show that after a strong priming stimulus through TCRs and co-stimulatory receptors in vitro, granzyme B expression and the ability to produce effector cytokines are programmed early, whereas perforin expression and cytolytic function are induced later, during the phase of clonal expansion in IL-2.
T54 0-313 Sentence denotes These results show that after a strong priming stimulus through TCRs and co-stimulatory receptors in vitro, granzyme B expression and the ability to produce effector cytokines are programmed early, whereas perforin expression and cytolytic function are induced later, during the phase of clonal expansion in IL-2.

events-check-again

Id Subject Object Predicate Lexical cue
T4526 108-118 Protein denotes granzyme B
T4527 119-129 Gene_expression denotes expression
T4528 206-214 Protein denotes perforin
T4529 215-225 Gene_expression denotes expression
T4530 253-260 Positive_regulation denotes induced
T4531 308-312 Protein denotes IL-2
R3578 T4526 T4527 themeOf granzyme B,expression
R3579 T4528 T4529 themeOf perforin,expression
R3580 T4529 T4530 themeOf expression,induced

bionlp-st-ge-2016-reference-tees

Id Subject Object Predicate Lexical cue
T4572 64-68 Protein denotes TCRs
T4573 108-118 Protein denotes granzyme B
T4574 206-214 Protein denotes perforin
T4575 308-312 Protein denotes IL-2
T4576 119-129 Gene_expression denotes expression
T4577 215-225 Gene_expression denotes expression
T4578 253-260 Positive_regulation denotes induced
R3589 T4573 T4576 themeOf granzyme B,expression
R3596 T4574 T4577 themeOf perforin,expression
R3600 T4577 T4578 themeOf expression,induced

bionlp-st-ge-2016-reference

Id Subject Object Predicate Lexical cue
T3342 108-118 Protein denotes granzyme B
T3343 119-129 Gene_expression denotes expression
T3344 206-214 Protein denotes perforin
T3345 215-225 Gene_expression denotes expression
T3346 253-260 Positive_regulation denotes induced
T3347 308-312 Protein denotes IL-2
R2561 T3342 T3343 themeOf granzyme B,expression
R2562 T3344 T3345 themeOf perforin,expression
R2563 T3345 T3346 themeOf expression,induced

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T4276 108-118 P10144 denotes granzyme B
T4277 206-214 P14222 denotes perforin
T4278 308-312 P60568 denotes IL-2

test2

Id Subject Object Predicate Lexical cue
T3301 108-118 Protein denotes granzyme B
T3302 119-129 Gene_expression denotes expression
T3303 206-214 Protein denotes perforin
T3304 215-225 Gene_expression denotes expression
T3305 253-260 Positive_regulation denotes induced
T3306 308-312 Protein denotes IL-2
R2536 T3301 T3302 themeOf granzyme B,expression
R2537 T3303 T3304 themeOf perforin,expression
R2538 T3304 T3305 themeOf expression,induced