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PMC:2626671 / 780-922 JSONTXT

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pmc-enju-pas

Id Subject Object Predicate Lexical cue
T390 0-5 NN denotes Runx3
T391 6-15 VB denotes regulates
T392 16-21 NN denotes Eomes
T393 22-32 NN denotes expression
T394 33-35 RB denotes as
T395 36-40 RB denotes well
T396 41-43 IN denotes as
T397 44-54 NN denotes expression
T398 55-57 IN denotes of
T399 58-63 CD denotes three
T400 64-72 JJ denotes cardinal
T401 73-80 NN denotes markers
T402 81-83 IN denotes of
T403 84-87 DT denotes the
T404 88-96 NN denotes effector
T405 97-100 NN denotes CTL
T406 101-108 NN denotes program
T407 108-109 -COLON- denotes :
T408 110-115 NN denotes IFN-γ
T409 115-116 -COMMA- denotes ,
T410 117-125 NN denotes perforin
T411 125-126 -COMMA- denotes ,
T412 127-130 CC denotes and
T413 131-139 NN denotes granzyme
T414 140-142 NNP denotes B.
R321 T390 T391 arg1Of Runx3,regulates
R322 T393 T396 arg1Of expression,as
R323 T396 T391 arg2Of as,regulates
R324 T396 T392 arg1Of as,Eomes
R325 T396 T394 arg1Of as,as
R326 T396 T395 arg1Of as,well
R327 T397 T396 arg2Of expression,as
R328 T397 T398 arg1Of expression,of
R329 T401 T398 arg2Of markers,of
R330 T401 T399 arg1Of markers,three
R331 T401 T400 arg1Of markers,cardinal
R332 T401 T402 arg1Of markers,of
R333 T401 T407 arg1Of markers,:
R334 T406 T402 arg2Of program,of
R335 T406 T403 arg1Of program,the
R336 T406 T404 arg1Of program,effector
R337 T406 T405 arg1Of program,CTL
R338 T408 T409 arg1Of IFN-γ,","
R339 T409 T412 arg1Of ",",and
R340 T410 T409 arg2Of perforin,","
R341 T412 T407 arg2Of and,:
R342 T412 T411 arg1Of and,","
R343 T414 T412 arg2Of B.,and
R344 T414 T413 arg1Of B.,granzyme

bionlp-st-ge-2016-coref

Id Subject Object Predicate Lexical cue
T448 58-80 Anaphor denotes three cardinal markers
T449 110-115 Antecedent denotes IFN-γ
T450 117-125 Antecedent denotes perforin
T451 131-141 Antecedent denotes granzyme B
R470 T448 T449 boundBy three cardinal markers,IFN-γ
R471 T448 T450 boundBy three cardinal markers,perforin
R472 T448 T451 boundBy three cardinal markers,granzyme B

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T213 0-5 JJ denotes Runx3
T214 6-15 VBZ denotes regulates
T215 16-21 NNP denotes Eomes
T216 22-32 NN denotes expression
T217 33-35 RB denotes as
T218 36-40 RB denotes well
T219 41-43 IN denotes as
T220 44-54 NN denotes expression
T221 55-57 IN denotes of
T222 58-63 CD denotes three
T223 64-72 JJ denotes cardinal
T224 73-80 NNS denotes markers
T225 81-83 IN denotes of
T226 84-87 DT denotes the
T227 88-96 NN denotes effector
T228 97-100 NNP denotes CTL
T229 101-108 NN denotes program
T230 108-109 : denotes :
T231 110-115 NNP denotes IFN-γ
T232 115-116 , denotes ,
T233 117-125 NN denotes perforin
T234 125-126 , denotes ,
T235 127-130 CC denotes and
T236 131-139 NN denotes granzyme
T237 140-141 NN denotes B
T238 141-142 . denotes .
R144 T213 T214 nsubj Runx3,regulates
R145 T214 T214 ROOT regulates,regulates
R146 T215 T216 compound Eomes,expression
R147 T216 T214 dobj expression,regulates
R148 T217 T219 advmod as,as
R149 T218 T219 advmod well,as
R150 T219 T216 cc as,expression
R151 T220 T216 conj expression,expression
R152 T221 T216 prep of,expression
R153 T222 T224 nummod three,markers
R154 T223 T224 compound cardinal,markers
R155 T224 T221 pobj markers,of
R156 T225 T224 prep of,markers
R157 T226 T229 det the,program
R158 T227 T228 compound effector,CTL
R159 T228 T229 compound CTL,program
R160 T229 T225 pobj program,of
R161 T230 T224 punct :,markers
R162 T231 T224 appos IFN-γ,markers
R163 T232 T231 punct ",",IFN-γ
R164 T233 T231 conj perforin,IFN-γ
R165 T234 T233 punct ",",perforin
R166 T235 T233 cc and,perforin
R167 T236 T237 compound granzyme,B
R168 T237 T233 conj B,perforin
R169 T238 T214 punct .,regulates

sentences

Id Subject Object Predicate Lexical cue
T7 0-142 Sentence denotes Runx3 regulates Eomes expression as well as expression of three cardinal markers of the effector CTL program: IFN-γ, perforin, and granzyme B.

events-check-again

Id Subject Object Predicate Lexical cue
T618 44-54 Gene_expression denotes expression
T619 44-54 Gene_expression denotes expression
T620 110-115 Protein denotes IFN-γ
T621 117-125 Protein denotes perforin
T622 131-141 Protein denotes granzyme B
T610 0-5 Protein denotes Runx3
T611 6-15 Regulation denotes regulates
T612 6-15 Regulation denotes regulates
T613 6-15 Regulation denotes regulates
T614 6-15 Regulation denotes regulates
T615 16-21 Protein denotes Eomes
T616 22-32 Gene_expression denotes expression
T617 44-54 Gene_expression denotes expression
R515 T610 T611 causeOf Runx3,regulates
R516 T610 T614 causeOf Runx3,regulates
R517 T610 T612 causeOf Runx3,regulates
R518 T610 T613 causeOf Runx3,regulates
R519 T615 T616 themeOf Eomes,expression
R520 T616 T611 themeOf expression,regulates
R521 T617 T614 themeOf expression,regulates
R522 T618 T612 themeOf expression,regulates
R523 T619 T613 themeOf expression,regulates
R524 T620 T617 themeOf IFN-γ,expression
R525 T621 T618 themeOf perforin,expression
R526 T622 T619 themeOf granzyme B,expression

bionlp-st-ge-2016-reference-tees

Id Subject Object Predicate Lexical cue
T631 0-5 Protein denotes Runx3
T632 110-115 Protein denotes IFN-γ
T633 117-125 Protein denotes perforin
T634 131-141 Protein denotes granzyme B
T635 44-54 Gene_expression denotes expression
T636 44-54 Gene_expression denotes expression
T637 44-54 Gene_expression denotes expression
T638 6-15 Regulation denotes regulates
T639 6-15 Regulation denotes regulates
T640 6-15 Regulation denotes regulates
R429 T631 T638 causeOf Runx3,regulates
R430 T631 T639 causeOf Runx3,regulates
R431 T631 T640 causeOf Runx3,regulates
R432 T632 T635 themeOf IFN-γ,expression
R527 T633 T636 themeOf perforin,expression
R528 T634 T637 themeOf granzyme B,expression
R529 T635 T638 themeOf expression,regulates
R530 T636 T639 themeOf expression,regulates
R531 T637 T640 themeOf expression,regulates

bionlp-st-ge-2016-reference

Id Subject Object Predicate Lexical cue
T63 0-5 Protein denotes Runx3
T64 6-15 Regulation denotes regulates
T65 6-15 Regulation denotes regulates
T66 6-15 Regulation denotes regulates
T67 6-15 Regulation denotes regulates
T68 16-21 Protein denotes Eomes
T69 22-32 Gene_expression denotes expression
T70 44-54 Gene_expression denotes expression
T71 44-54 Gene_expression denotes expression
T72 44-54 Gene_expression denotes expression
T73 110-115 Protein denotes IFN-γ
T74 117-125 Protein denotes perforin
T75 131-141 Protein denotes granzyme B
R456 T63 T64 causeOf Runx3,regulates
R457 T63 T67 causeOf Runx3,regulates
R458 T63 T65 causeOf Runx3,regulates
R459 T63 T66 causeOf Runx3,regulates
R460 T68 T69 themeOf Eomes,expression
R461 T69 T64 themeOf expression,regulates
R462 T70 T67 themeOf expression,regulates
R463 T71 T65 themeOf expression,regulates
R464 T72 T66 themeOf expression,regulates
R465 T73 T70 themeOf IFN-γ,expression
R466 T74 T71 themeOf perforin,expression
R467 T75 T72 themeOf granzyme B,expression

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T459 0-5 Q13761 denotes Runx3
T460 16-21 O95936 denotes Eomes
T461 110-115 P01579 denotes IFN-γ
T462 117-125 P14222 denotes perforin
T463 131-141 P10144 denotes granzyme B

test2

Id Subject Object Predicate Lexical cue
T41 0-5 Protein denotes Runx3
T42 6-15 Regulation denotes regulates
T43 16-21 Protein denotes Eomes
T44 22-32 Gene_expression denotes expression
T45 44-54 Gene_expression denotes expression
T46 110-115 Protein denotes IFN-γ
T47 117-125 Protein denotes perforin
T48 131-141 Protein denotes granzyme B
R442 T41 T42 causeOf Runx3,regulates
R443 T43 T44 themeOf Eomes,expression
R444 T44 T42 themeOf expression,regulates
R445 T46 T45 themeOf IFN-γ,expression
R446 T47 T45 themeOf perforin,expression
R447 T48 T45 themeOf granzyme B,expression