PMC:2626671 / 3879-4021
Annnotations
pmc-enju-pas
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1937 | 0-1 | NN | denotes | T |
| T1938 | 2-7 | NN | denotes | cells |
| T1939 | 8-15 | VB | denotes | lacking |
| T1940 | 16-21 | NN | denotes | Runx3 |
| T1941 | 22-26 | NN | denotes | show |
| T1942 | 27-36 | VB | denotes | decreased |
| T1943 | 37-47 | NN | denotes | expression |
| T1944 | 48-50 | IN | denotes | of |
| T1945 | 51-56 | NN | denotes | IFN-γ |
| T1946 | 57-60 | CC | denotes | and |
| T1947 | 61-69 | NN | denotes | granzyme |
| T1948 | 70-71 | NN | denotes | B |
| T1949 | 71-72 | -COMMA- | denotes | , |
| T1950 | 73-76 | CC | denotes | and |
| T1951 | 77-82 | NN | denotes | Runx3 |
| T1952 | 83-87 | RB | denotes | also |
| T1953 | 88-93 | VB | denotes | binds |
| T1954 | 94-97 | DT | denotes | the |
| T1955 | 98-106 | NN | denotes | promoter |
| T1956 | 107-114 | NN | denotes | regions |
| T1957 | 115-117 | IN | denotes | of |
| T1958 | 118-141 | NN | denotes | the Ifng and Gzmb genes |
| R1670 | T1938 | T1937 | arg1Of | cells,T |
| R1671 | T1938 | T1939 | arg1Of | cells,lacking |
| R1672 | T1938 | T1953 | arg1Of | cells,binds |
| R1674 | T1941 | T1939 | arg2Of | show,lacking |
| R1675 | T1941 | T1940 | arg1Of | show,Runx3 |
| R1676 | T1941 | T1942 | arg2Of | show,decreased |
| R1677 | T1943 | T1942 | arg3Of | expression,decreased |
| R1678 | T1943 | T1944 | arg1Of | expression,of |
| R1680 | T1945 | T1946 | arg1Of | IFN-γ,and |
| R1682 | T1946 | T1950 | arg1Of | and,and |
| R1683 | T1948 | T1946 | arg2Of | B,and |
| R1684 | T1948 | T1947 | arg1Of | B,granzyme |
| R1685 | T1950 | T1944 | arg2Of | and,of |
| R1686 | T1950 | T1949 | arg1Of | and,"," |
| R1687 | T1951 | T1950 | arg2Of | Runx3,and |
| R1689 | T1953 | T1952 | arg1Of | binds,also |
| R1693 | T1956 | T1953 | arg2Of | regions,binds |
| R1694 | T1956 | T1954 | arg1Of | regions,the |
| R1695 | T1956 | T1955 | arg1Of | regions,promoter |
| R1696 | T1956 | T1957 | arg1Of | regions,of |
| R1697 | T1958 | T1957 | arg2Of | the Ifng and Gzmb genes,of |
bionlp-st-ge-2016-spacy-parsed
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1273 | 70-71 | NN | denotes | B |
| T1347 | 0-1 | NNP | denotes | T |
| T1348 | 2-7 | NNS | denotes | cells |
| T1349 | 8-15 | VBG | denotes | lacking |
| T1350 | 16-21 | JJ | denotes | Runx3 |
| T1351 | 22-26 | NN | denotes | show |
| T1352 | 27-36 | VBD | denotes | decreased |
| T1353 | 37-47 | NN | denotes | expression |
| T1354 | 48-50 | IN | denotes | of |
| T1355 | 51-56 | NNP | denotes | IFN-γ |
| T1356 | 57-60 | CC | denotes | and |
| T1357 | 61-69 | NN | denotes | granzyme |
| T1358 | 71-72 | , | denotes | , |
| T1359 | 73-76 | CC | denotes | and |
| T1360 | 77-82 | NNP | denotes | Runx3 |
| T1361 | 83-87 | RB | denotes | also |
| T1362 | 88-93 | VBZ | denotes | binds |
| T1363 | 94-97 | DT | denotes | the |
| T1364 | 98-106 | NN | denotes | promoter |
| T1365 | 107-114 | NNS | denotes | regions |
| T1366 | 115-117 | IN | denotes | of |
| T1367 | 118-141 | NNS | denotes | the Ifng and Gzmb genes |
| T1368 | 141-142 | . | denotes | . |
| R1039 | T1273 | T1355 | conj | B,IFN-γ |
| R1113 | T1347 | T1348 | compound | T,cells |
| R1114 | T1348 | T1352 | nsubj | cells,decreased |
| R1115 | T1349 | T1348 | acl | lacking,cells |
| R1116 | T1350 | T1351 | amod | Runx3,show |
| R1117 | T1351 | T1349 | dobj | show,lacking |
| R1118 | T1352 | T1352 | ROOT | decreased,decreased |
| R1119 | T1353 | T1352 | dobj | expression,decreased |
| R1120 | T1354 | T1353 | prep | of,expression |
| R1121 | T1355 | T1354 | pobj | IFN-γ,of |
| R1122 | T1356 | T1355 | cc | and,IFN-γ |
| R1123 | T1357 | T1273 | compound | granzyme,B |
| R1124 | T1358 | T1352 | punct | ",",decreased |
| R1125 | T1359 | T1352 | cc | and,decreased |
| R1126 | T1360 | T1362 | nsubj | Runx3,binds |
| R1127 | T1361 | T1362 | advmod | also,binds |
| R1128 | T1362 | T1352 | conj | binds,decreased |
| R1129 | T1363 | T1365 | det | the,regions |
| R1130 | T1364 | T1365 | compound | promoter,regions |
| R1131 | T1365 | T1362 | dobj | regions,binds |
| R1132 | T1366 | T1365 | prep | of,regions |
| R1133 | T1367 | T1366 | pobj | the Ifng and Gzmb genes,of |
| R1134 | T1368 | T1362 | punct | .,binds |
GO-CC
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T2088 | 2-7 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T840 | 0-142 | Sentence | denotes | T cells lacking Runx3 show decreased expression of IFN-γ and granzyme B, and Runx3 also binds the promoter regions of the Ifng and Gzmb genes. |
| T24 | 0-142 | Sentence | denotes | T cells lacking Runx3 show decreased expression of IFN-γ and granzyme B, and Runx3 also binds the promoter regions of the Ifng and Gzmb genes. |
events-check-again
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T2631 | 8-15 | Negative_regulation | denotes | lacking |
| T2632 | 16-21 | Protein | denotes | Runx3 |
| T2633 | 27-36 | Negative_regulation | denotes | decreased |
| T2634 | 27-36 | Negative_regulation | denotes | decreased |
| T2635 | 37-47 | Gene_expression | denotes | expression |
| T2636 | 37-47 | Gene_expression | denotes | expression |
| T2637 | 51-56 | Protein | denotes | IFN-γ |
| T2638 | 61-71 | Protein | denotes | granzyme B |
| T2639 | 77-82 | Protein | denotes | Runx3 |
| T2640 | 88-93 | Binding | denotes | binds |
| T2641 | 88-93 | Binding | denotes | binds |
| T2642 | 98-114 | Entity | denotes | promoter regions |
| T2643 | 122-126 | Protein | denotes | Ifng |
| T2644 | 131-135 | Protein | denotes | Gzmb |
| R2047 | T2631 | T2633 | causeOf | lacking,decreased |
| R2048 | T2631 | T2634 | causeOf | lacking,decreased |
| R2049 | T2632 | T2631 | themeOf | Runx3,lacking |
| R2052 | T2635 | T2633 | themeOf | expression,decreased |
| R2053 | T2636 | T2634 | themeOf | expression,decreased |
| R2054 | T2637 | T2635 | themeOf | IFN-γ,expression |
| R2056 | T2638 | T2636 | themeOf | granzyme B,expression |
| R2057 | T2639 | T2640 | themeOf | Runx3,binds |
| R2058 | T2639 | T2641 | themeOf | Runx3,binds |
| R2059 | T2642 | T2640 | themeOf | promoter regions,binds |
| R2060 | T2642 | T2643 | partOf | promoter regions,Ifng |
| R2061 | T2642 | T2641 | themeOf | promoter regions,binds |
| R2062 | T2642 | T2644 | partOf | promoter regions,Gzmb |
bionlp-st-ge-2016-reference
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1426 | 8-15 | Negative_regulation | denotes | lacking |
| T1427 | 27-36 | Negative_regulation | denotes | decreased |
| T1428 | 37-47 | Gene_expression | denotes | expression |
| T1429 | 27-36 | Negative_regulation | denotes | decreased |
| T1430 | 37-47 | Gene_expression | denotes | expression |
| T1431 | 88-93 | Binding | denotes | binds |
| T1432 | 88-93 | Binding | denotes | binds |
| T1484 | 16-21 | Protein | denotes | Runx3 |
| T1485 | 51-56 | Protein | denotes | IFN-γ |
| T1486 | 61-71 | Protein | denotes | granzyme B |
| T1487 | 77-82 | Protein | denotes | Runx3 |
| T1489 | 122-126 | Protein | denotes | Ifng |
| T1490 | 131-135 | Protein | denotes | Gzmb |
| T1500 | 98-114 | Entity | denotes | promoter regions |
| R1213 | T1484 | T1426 | themeOf | Runx3,lacking |
| R1214 | T1485 | T1428 | themeOf | IFN-γ,expression |
| R1215 | T1486 | T1430 | themeOf | granzyme B,expression |
| R1216 | T1487 | T1431 | themeOf | Runx3,binds |
| R1175 | T1426 | T1427 | causeOf | lacking,decreased |
| R1176 | T1426 | T1429 | causeOf | lacking,decreased |
| R1177 | T1428 | T1427 | themeOf | expression,decreased |
| R1178 | T1430 | T1429 | themeOf | expression,decreased |
| R1217 | T1487 | T1432 | themeOf | Runx3,binds |
| R1225 | T1500 | T1431 | themeOf | promoter regions,binds |
| R1226 | T1500 | T1489 | partOf | promoter regions,Ifng |
| R1227 | T1500 | T1432 | themeOf | promoter regions,binds |
| R1228 | T1500 | T1490 | partOf | promoter regions,Gzmb |
bionlp-st-ge-2016-uniprot
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T2051 | 16-21 | Q13761 | denotes | Runx3 |
| T2052 | 51-56 | P01579 | denotes | IFN-γ |
| T2053 | 61-71 | P10144 | denotes | granzyme B |
| T2054 | 77-82 | Q13761 | denotes | Runx3 |
test2
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T807 | 8-15 | Negative_regulation | denotes | lacking |
| T808 | 16-21 | Protein | denotes | Runx3 |
| T809 | 27-36 | Negative_regulation | denotes | decreased |
| T810 | 37-47 | Gene_expression | denotes | expression |
| T811 | 51-56 | Protein | denotes | IFN-γ |
| T812 | 61-71 | Protein | denotes | granzyme B |
| T813 | 77-82 | Protein | denotes | Runx3 |
| T814 | 88-93 | Binding | denotes | binds |
| T815 | 98-114 | Entity | denotes | promoter regions |
| T816 | 118-141 | Protein | denotes | the Ifng and Gzmb genes |
| R627 | T807 | T809 | causeOf | lacking,decreased |
| R628 | T808 | T807 | themeOf | Runx3,lacking |
| R629 | T808 | T809 | causeOf | Runx3,decreased |
| R630 | T810 | T809 | themeOf | expression,decreased |
| R631 | T811 | T810 | themeOf | IFN-γ,expression |
| R632 | T812 | T810 | themeOf | granzyme B,expression |
| R633 | T813 | T810 | themeOf | Runx3,expression |
| R634 | T813 | T814 | themeOf | Runx3,binds |
| R635 | T815 | T816 | partOf | promoter regions,the Ifng and Gzmb genes |
| R636 | T815 | T814 | themeOf | promoter regions,binds |