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PMC:2626671 / 30575-30805 JSONTXT

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pmc-enju-pas

Id Subject Object Predicate Lexical cue
T16815 0-2 IN denotes At
T16816 3-6 CD denotes ∼42
T16817 7-8 NN denotes h
T16818 9-14 IN denotes after
T16819 15-18 DT denotes the
T16820 19-26 JJ denotes initial
T16821 27-30 NN denotes TCR
T16822 31-41 NN denotes activation
T16823 42-44 IN denotes of
T16824 45-48 CD denotes 106
T16825 49-53 JJ denotes CD8+
T16826 54-55 NN denotes T
T16827 56-61 NN denotes cells
T16828 62-65 IN denotes per
T16829 66-70 RB denotes well
T16830 71-73 IN denotes in
T16831 74-81 JJ denotes 12-well
T16832 82-88 NN denotes plates
T16833 88-89 -COMMA- denotes ,
T16834 90-93 DT denotes the
T16835 94-101 NN denotes culture
T16836 102-107 NN denotes media
T16837 108-111 VB denotes was
T16838 112-119 VB denotes removed
T16839 120-123 CC denotes and
T16840 124-132 VB denotes replaced
T16841 133-137 IN denotes with
T16842 138-146 JJ denotes complete
T16843 147-152 NN denotes media
T16844 153-165 VB denotes supplemented
T16845 166-170 IN denotes with
T16846 171-172 CD denotes 8
T16847 173-178 NN denotes μg/ml
T16848 179-188 NN denotes polybrene
T16849 189-199 VB denotes containing
T16850 200-205 JJ denotes fresh
T16851 206-210 CC denotes plus
T16852 211-223 JJ denotes concentrated
T16853 224-229 NN denotes virus
R12957 T16817 T16815 arg2Of h,At
R12958 T16817 T16816 arg1Of h,∼42
R12959 T16817 T16818 arg1Of h,after
R12960 T16822 T16818 arg2Of activation,after
R12961 T16822 T16819 arg1Of activation,the
R12962 T16822 T16820 arg1Of activation,initial
R12963 T16822 T16821 arg1Of activation,TCR
R12964 T16822 T16823 arg1Of activation,of
R12965 T16822 T16828 arg1Of activation,per
R12966 T16827 T16823 arg2Of cells,of
R12967 T16827 T16824 arg1Of cells,106
R12968 T16827 T16825 arg1Of cells,CD8+
R12969 T16827 T16826 arg1Of cells,T
R12970 T16829 T16828 arg2Of well,per
R12971 T16829 T16830 arg1Of well,in
R12972 T16832 T16830 arg2Of plates,in
R12973 T16832 T16831 arg1Of plates,12-well
R12974 T16836 T16834 arg1Of media,the
R12975 T16836 T16835 arg1Of media,culture
R12976 T16836 T16837 arg1Of media,was
R12977 T16836 T16838 arg2Of media,removed
R12978 T16836 T16840 arg2Of media,replaced
R12979 T16838 T16839 arg1Of removed,and
R12980 T16839 T16815 arg1Of and,At
R12981 T16839 T16833 arg1Of and,","
R12982 T16839 T16837 arg2Of and,was
R12983 T16840 T16839 arg2Of replaced,and
R12984 T16840 T16841 arg1Of replaced,with
R12985 T16843 T16841 arg2Of media,with
R12986 T16843 T16842 arg1Of media,complete
R12987 T16843 T16844 arg2Of media,supplemented
R12988 T16844 T16845 arg1Of supplemented,with
R12989 T16848 T16845 arg2Of polybrene,with
R12990 T16848 T16846 arg1Of polybrene,8
R12991 T16848 T16847 arg1Of polybrene,μg/ml
R12992 T16848 T16849 arg1Of polybrene,containing
R12993 T16850 T16851 arg1Of fresh,plus
R12994 T16852 T16851 arg2Of concentrated,plus
R12995 T16853 T16849 arg2Of virus,containing
R12996 T16853 T16850 arg1Of virus,fresh
R12997 T16853 T16852 arg1Of virus,concentrated

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T16689 0-2 IN denotes At
T16690 3-4 CD denotes ∼
T16691 4-6 CD denotes 42
T16692 7-8 NN denotes h
T16693 9-14 IN denotes after
T16694 15-18 DT denotes the
T16695 19-26 JJ denotes initial
T16696 27-30 NNP denotes TCR
T16697 31-41 NN denotes activation
T16698 42-44 IN denotes of
T16699 45-48 CD denotes 106
T16700 49-52 CD denotes CD8
T16701 52-53 NN denotes +
T16702 54-55 NNP denotes T
T16703 56-61 NNS denotes cells
T16721 166-170 IN denotes with
T16722 171-172 CD denotes 8
T16723 173-175 NN denotes μg
T16724 175-176 NN denotes /
T16725 176-178 NN denotes ml
T16726 179-188 NN denotes polybrene
T16727 189-199 VBG denotes containing
T16728 200-205 JJ denotes fresh
T16729 206-210 CC denotes plus
T16730 211-223 JJ denotes concentrated
T16731 224-229 NN denotes virus
T16732 229-230 . denotes .
T16704 62-65 IN denotes per
T16705 66-70 RB denotes well
T16706 71-73 IN denotes in
T16707 74-81 JJ denotes 12-well
T16708 82-88 NNS denotes plates
T16709 88-89 , denotes ,
T16710 90-93 DT denotes the
T16711 94-101 NN denotes culture
T16712 102-107 NNS denotes media
T16713 108-111 VBD denotes was
T16714 112-119 VBN denotes removed
T16715 120-123 CC denotes and
T16716 124-132 VBN denotes replaced
T16717 133-137 IN denotes with
T16718 138-146 JJ denotes complete
T16719 147-152 NNS denotes media
T16720 153-165 VBN denotes supplemented
R12832 T16689 T16714 prep At,removed
R12833 T16690 T16714 nsubjpass ∼,removed
R12834 T16691 T16692 nummod 42,h
R12835 T16692 T16693 npadvmod h,after
R12836 T16693 T16690 prep after,∼
R12837 T16694 T16697 det the,activation
R12838 T16695 T16697 amod initial,activation
R12839 T16696 T16697 compound TCR,activation
R12840 T16697 T16693 pobj activation,after
R12841 T16698 T16697 prep of,activation
R12842 T16699 T16703 nummod 106,cells
R12843 T16700 T16703 nummod CD8,cells
R12844 T16701 T16703 compound +,cells
R12845 T16702 T16703 compound T,cells
R12846 T16703 T16698 pobj cells,of
R12847 T16704 T16703 prep per,cells
R12848 T16705 T16706 advmod well,in
R12849 T16706 T16704 prep in,per
R12850 T16707 T16708 amod 12-well,plates
R12851 T16708 T16706 pobj plates,in
R12852 T16709 T16714 punct ",",removed
R12853 T16710 T16712 det the,media
R12854 T16711 T16712 compound culture,media
R12855 T16712 T16714 nsubjpass media,removed
R12856 T16713 T16714 auxpass was,removed
R12857 T16714 T16714 ROOT removed,removed
R12858 T16715 T16714 cc and,removed
R12859 T16716 T16714 conj replaced,removed
R12860 T16717 T16716 prep with,replaced
R12861 T16718 T16719 amod complete,media
R12862 T16719 T16717 pobj media,with
R12863 T16720 T16714 conj supplemented,removed
R12864 T16721 T16720 prep with,supplemented
R12865 T16722 T16723 nummod 8,μg
R12866 T16723 T16726 nmod μg,polybrene
R12867 T16724 T16726 nmod /,polybrene
R12868 T16725 T16726 compound ml,polybrene
R12869 T16726 T16721 pobj polybrene,with
R12870 T16727 T16726 acl containing,polybrene
R12871 T16728 T16731 amod fresh,virus
R12872 T16729 T16728 cc plus,fresh
R12873 T16730 T16728 conj concentrated,fresh
R12874 T16731 T16727 dobj virus,containing
R12875 T16732 T16714 punct .,removed

GO-BP

Id Subject Object Predicate Lexical cue
T16654 27-30 http://purl.obolibrary.org/obo/GO_0006283 denotes TCR

GO-CC

Id Subject Object Predicate Lexical cue
T16916 56-61 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T16917 27-30 http://purl.obolibrary.org/obo/GO_0042101 denotes TCR

sentences

Id Subject Object Predicate Lexical cue
T16649 0-230 Sentence denotes At ∼42 h after the initial TCR activation of 106 CD8+ T cells per well in 12-well plates, the culture media was removed and replaced with complete media supplemented with 8 μg/ml polybrene containing fresh plus concentrated virus.
T184 0-230 Sentence denotes At ∼42 h after the initial TCR activation of 106 CD8+ T cells per well in 12-well plates, the culture media was removed and replaced with complete media supplemented with 8 μg/ml polybrene containing fresh plus concentrated virus.

events-check-again

Id Subject Object Predicate Lexical cue
T16928 49-52 Protein denotes CD8

bionlp-st-ge-2016-reference-tees

Id Subject Object Predicate Lexical cue
T16931 27-30 Protein denotes TCR
T16932 49-52 Protein denotes CD8

bionlp-st-ge-2016-reference

Id Subject Object Predicate Lexical cue
T16645 49-52 Protein denotes CD8

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T16905 49-52 P10966 denotes CD8
T16906 49-52 P01732 denotes CD8

test2

Id Subject Object Predicate Lexical cue
T16643 49-52 Protein denotes CD8