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PMC:2626671 / 29704-30351
Annnotations
2_test
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
19139168-15516924-59674075 | 252-254 | 15516924 | denotes | 28 |
pmc-enju-pas
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T16510 | 0-8 | NN | denotes | Cytokine |
T16511 | 9-12 | CC | denotes | and |
T16512 | 13-20 | NN | denotes | surface |
T16513 | 21-27 | NN | denotes | marker |
T16514 | 28-36 | NN | denotes | staining |
T16515 | 38-40 | TO | denotes | To |
T16516 | 41-47 | VB | denotes | assess |
T16517 | 48-56 | NN | denotes | cytokine |
T16518 | 57-67 | NN | denotes | production |
T16519 | 67-68 | -COMMA- | denotes | , |
T16520 | 69-74 | NN | denotes | cells |
T16521 | 75-79 | VB | denotes | were |
T16522 | 80-92 | VB | denotes | restimulated |
T16523 | 93-97 | IN | denotes | with |
T16524 | 98-100 | CD | denotes | 10 |
T16525 | 101-103 | NN | denotes | nM |
T16526 | 104-107 | NN | denotes | PMA |
T16527 | 108-109 | SYM | denotes | + |
T16528 | 110-111 | CD | denotes | 1 |
T16529 | 112-114 | NN | denotes | μM |
T16530 | 115-124 | NN | denotes | ionomycin |
T16531 | 125-128 | IN | denotes | for |
T16532 | 129-130 | CD | denotes | 6 |
T16533 | 131-132 | NN | denotes | h |
T16534 | 133-134 | -LRB- | denotes | ( |
T16535 | 134-140 | IN | denotes | unless |
T16536 | 141-150 | VB | denotes | indicated |
T16537 | 151-160 | RB | denotes | otherwise |
T16538 | 161-163 | IN | denotes | in |
T16539 | 164-167 | DT | denotes | the |
T16540 | 168-175 | NN | denotes | figures |
T16541 | 175-176 | -RRB- | denotes | ) |
T16542 | 176-177 | -COMMA- | denotes | , |
T16543 | 178-181 | CC | denotes | and |
T16544 | 182-195 | JJ | denotes | intracellular |
T16545 | 196-204 | NN | denotes | cytokine |
T16546 | 205-211 | NN | denotes | stains |
T16547 | 212-216 | VB | denotes | were |
T16548 | 217-226 | VB | denotes | performed |
T16549 | 227-229 | IN | denotes | as |
T16550 | 230-240 | RB | denotes | previously |
T16551 | 241-250 | VB | denotes | described |
T16552 | 251-252 | -LRB- | denotes | ( |
T16553 | 252-254 | CD | denotes | 28 |
T16554 | 254-255 | -RRB- | denotes | ) |
T16555 | 257-259 | TO | denotes | To |
T16556 | 260-266 | VB | denotes | detect |
T16557 | 267-277 | NN | denotes | expression |
T16558 | 278-280 | IN | denotes | of |
T16559 | 281-288 | NN | denotes | surface |
T16560 | 289-298 | NN | denotes | molecules |
T16561 | 298-299 | -COMMA- | denotes | , |
T16562 | 300-305 | NN | denotes | cells |
T16563 | 306-310 | VB | denotes | were |
T16564 | 311-317 | VB | denotes | washed |
T16565 | 318-320 | IN | denotes | in |
T16566 | 321-324 | NNP | denotes | PBS |
T16567 | 324-325 | -COMMA- | denotes | , |
T16568 | 326-337 | VB | denotes | resuspended |
T16569 | 338-340 | IN | denotes | in |
T16570 | 341-345 | NN | denotes | FACS |
T16571 | 346-350 | NN | denotes | wash |
T16572 | 351-357 | NN | denotes | buffer |
T16573 | 358-359 | -LRB- | denotes | ( |
T16574 | 359-360 | CD | denotes | 3 |
T16575 | 360-361 | NN | denotes | % |
T16576 | 362-365 | NN | denotes | FBS |
T16577 | 365-366 | -COMMA- | denotes | , |
T16578 | 367-370 | CD | denotes | 0.1 |
T16579 | 370-371 | NN | denotes | % |
T16580 | 372-378 | NN | denotes | sodium |
T16581 | 379-384 | NN | denotes | azide |
T16582 | 384-385 | -COMMA- | denotes | , |
T16583 | 386-388 | CD | denotes | 30 |
T16584 | 389-391 | NN | denotes | mM |
T16585 | 392-397 | NNP | denotes | Hepes |
T16586 | 397-398 | -COMMA- | denotes | , |
T16587 | 399-401 | CD | denotes | 1× |
T16588 | 402-405 | NNP | denotes | PBS |
T16589 | 405-406 | -RRB- | denotes | ) |
T16590 | 407-417 | VB | denotes | containing |
T16591 | 418-421 | DT | denotes | the |
T16592 | 422-432 | NN | denotes | antibodies |
T16593 | 433-442 | VB | denotes | indicated |
T16594 | 443-445 | IN | denotes | in |
T16595 | 446-449 | DT | denotes | the |
T16596 | 450-457 | NN | denotes | figures |
T16597 | 458-460 | IN | denotes | at |
T16609 | 539-540 | -LRB- | denotes | ( |
T16610 | 540-542 | NN | denotes | RT |
T16611 | 542-543 | -RRB- | denotes | ) |
T16612 | 543-544 | -COMMA- | denotes | , |
T16613 | 545-551 | VB | denotes | washed |
T16614 | 551-552 | -COMMA- | denotes | , |
T16615 | 553-556 | CC | denotes | and |
T16616 | 557-568 | VB | denotes | resuspended |
T16617 | 569-571 | IN | denotes | in |
T16618 | 572-573 | CD | denotes | 2 |
T16619 | 573-574 | NN | denotes | % |
T16620 | 575-587 | NN | denotes | formaldehyde |
T16621 | 588-596 | JJ | denotes | fixative |
T16622 | 597-605 | NN | denotes | solution |
T16623 | 606-612 | IN | denotes | before |
T16624 | 613-624 | NN | denotes | acquisition |
T16625 | 625-627 | IN | denotes | on |
T16626 | 628-629 | DT | denotes | a |
T16627 | 630-641 | NN | denotes | FACSCalibur |
T16628 | 642-643 | -LRB- | denotes | ( |
T16629 | 643-645 | NN | denotes | BD |
T16630 | 645-646 | -RRB- | denotes | ) |
T16598 | 461-471 | RB | denotes | previously |
T16599 | 472-481 | VB | denotes | optimized |
T16600 | 482-496 | NN | denotes | concentrations |
T16601 | 496-497 | -COMMA- | denotes | , |
T16602 | 498-507 | VB | denotes | incubated |
T16603 | 508-511 | IN | denotes | for |
T16604 | 512-514 | CD | denotes | 15 |
T16605 | 515-518 | NN | denotes | min |
T16606 | 519-521 | IN | denotes | at |
T16607 | 522-526 | NN | denotes | room |
T16608 | 527-538 | NN | denotes | temperature |
R12670 | T16510 | T16511 | arg1Of | Cytokine,and |
R12671 | T16512 | T16511 | arg2Of | surface,and |
R12672 | T16514 | T16510 | arg1Of | staining,Cytokine |
R12673 | T16514 | T16512 | arg1Of | staining,surface |
R12674 | T16514 | T16513 | arg1Of | staining,marker |
R12679 | T16520 | T16521 | arg1Of | cells,were |
R12680 | T16520 | T16522 | arg2Of | cells,restimulated |
R12681 | T16520 | T16536 | arg2Of | cells,indicated |
R12682 | T16522 | T16521 | arg2Of | restimulated,were |
R12683 | T16522 | T16523 | arg1Of | restimulated,with |
R12684 | T16522 | T16535 | arg1Of | restimulated,unless |
R12685 | T16522 | T16543 | arg1Of | restimulated,and |
R12686 | T16524 | T16525 | arg1Of | 10,nM |
R12687 | T16528 | T16527 | arg1Of | 1,+ |
R12688 | T16530 | T16523 | arg2Of | ionomycin,with |
R12689 | T16530 | T16524 | arg1Of | ionomycin,10 |
R12690 | T16530 | T16526 | arg1Of | ionomycin,PMA |
R12691 | T16530 | T16528 | arg1Of | ionomycin,1 |
R12692 | T16530 | T16529 | arg1Of | ionomycin,μM |
R12693 | T16530 | T16531 | arg1Of | ionomycin,for |
R12694 | T16533 | T16531 | arg2Of | h,for |
R12695 | T16533 | T16532 | arg1Of | h,6 |
R12696 | T16533 | T16534 | arg1Of | h,( |
R12697 | T16536 | T16535 | arg2Of | indicated,unless |
R12698 | T16536 | T16537 | arg1Of | indicated,otherwise |
R12699 | T16536 | T16538 | arg1Of | indicated,in |
R12700 | T16540 | T16538 | arg2Of | figures,in |
R12701 | T16540 | T16539 | arg1Of | figures,the |
R12702 | T16540 | T16541 | arg1Of | figures,) |
R12703 | T16543 | T16515 | modOf | and,To |
R12704 | T16543 | T16519 | arg1Of | and,"," |
R12705 | T16543 | T16542 | arg1Of | and,"," |
R12706 | T16546 | T16544 | arg1Of | stains,intracellular |
R12707 | T16546 | T16545 | arg1Of | stains,cytokine |
R12708 | T16546 | T16547 | arg1Of | stains,were |
R12709 | T16546 | T16548 | arg2Of | stains,performed |
R12710 | T16548 | T16543 | arg2Of | performed,and |
R12711 | T16548 | T16547 | arg2Of | performed,were |
R12712 | T16548 | T16549 | arg1Of | performed,as |
R12713 | T16551 | T16549 | arg2Of | described,as |
R12714 | T16551 | T16550 | arg1Of | described,previously |
R12715 | T16551 | T16552 | arg1Of | described,( |
R12716 | T16553 | T16552 | arg2Of | 28,( |
R12717 | T16554 | T16552 | arg3Of | ),( |
R12718 | T16556 | T16555 | arg1Of | detect,To |
R12719 | T16557 | T16556 | arg2Of | expression,detect |
R12720 | T16557 | T16558 | arg1Of | expression,of |
R12721 | T16560 | T16558 | arg2Of | molecules,of |
R12722 | T16560 | T16559 | arg1Of | molecules,surface |
R12723 | T16562 | T16556 | arg1Of | cells,detect |
R12724 | T16562 | T16563 | arg1Of | cells,were |
R12725 | T16562 | T16564 | arg2Of | cells,washed |
R12726 | T16562 | T16568 | arg1Of | cells,resuspended |
R12727 | T16562 | T16602 | arg2Of | cells,incubated |
R12728 | T16562 | T16613 | arg1Of | cells,washed |
R12729 | T16562 | T16616 | arg1Of | cells,resuspended |
R12730 | T16564 | T16563 | arg2Of | washed,were |
R12731 | T16564 | T16565 | arg1Of | washed,in |
R12732 | T16564 | T16567 | arg1Of | washed,"," |
R12733 | T16566 | T16565 | arg2Of | PBS,in |
R12734 | T16567 | T16602 | modOf | ",",incubated |
R12735 | T16567 | T16612 | arg1Of | ",","," |
R12736 | T16568 | T16567 | arg2Of | resuspended,"," |
R12737 | T16568 | T16569 | arg1Of | resuspended,in |
R12738 | T16572 | T16570 | arg1Of | buffer,FACS |
R12739 | T16572 | T16571 | arg1Of | buffer,wash |
R12740 | T16572 | T16573 | arg1Of | buffer,( |
R12741 | T16572 | T16590 | arg1Of | buffer,containing |
R12742 | T16572 | T16593 | arg1Of | buffer,indicated |
R12743 | T16574 | T16575 | arg1Of | 3,% |
R12744 | T16576 | T16573 | arg2Of | FBS,( |
R12745 | T16576 | T16574 | arg1Of | FBS,3 |
R12746 | T16576 | T16577 | arg1Of | FBS,"," |
R12747 | T16576 | T16582 | arg1Of | FBS,"," |
R12748 | T16576 | T16586 | arg1Of | FBS,"," |
R12749 | T16578 | T16579 | arg1Of | 0.1,% |
R12750 | T16581 | T16577 | arg2Of | azide,"," |
R12751 | T16581 | T16578 | arg1Of | azide,0.1 |
R12752 | T16581 | T16580 | arg1Of | azide,sodium |
R12753 | T16584 | T16583 | arg1Of | mM,30 |
R12754 | T16585 | T16582 | arg2Of | Hepes,"," |
R12755 | T16585 | T16584 | arg1Of | Hepes,mM |
R12756 | T16588 | T16586 | arg2Of | PBS,"," |
R12757 | T16588 | T16587 | arg1Of | PBS,1× |
R12758 | T16589 | T16573 | arg3Of | ),( |
R12759 | T16592 | T16590 | arg2Of | antibodies,containing |
R12760 | T16592 | T16591 | arg1Of | antibodies,the |
R12761 | T16593 | T16568 | arg2Of | indicated,resuspended |
R12762 | T16593 | T16594 | arg1Of | indicated,in |
R12763 | T16593 | T16597 | arg1Of | indicated,at |
R12764 | T16593 | T16601 | arg1Of | indicated,"," |
R12765 | T16596 | T16594 | arg2Of | figures,in |
R12766 | T16596 | T16595 | arg1Of | figures,the |
R12767 | T16599 | T16598 | arg1Of | optimized,previously |
R12768 | T16600 | T16597 | arg2Of | concentrations,at |
R12769 | T16600 | T16599 | arg1Of | concentrations,optimized |
R12770 | T16602 | T16603 | arg1Of | incubated,for |
R12771 | T16605 | T16603 | arg2Of | min,for |
R12772 | T16605 | T16604 | arg1Of | min,15 |
R12773 | T16605 | T16606 | arg1Of | min,at |
R12774 | T16608 | T16606 | arg2Of | temperature,at |
R12775 | T16608 | T16607 | arg1Of | temperature,room |
R12776 | T16608 | T16609 | arg1Of | temperature,( |
R12777 | T16610 | T16609 | arg2Of | RT,( |
R12778 | T16611 | T16609 | arg3Of | ),( |
R12779 | T16612 | T16615 | arg1Of | ",",and |
R12780 | T16613 | T16612 | arg2Of | washed,"," |
R12781 | T16615 | T16555 | modOf | and,To |
R12782 | T16615 | T16561 | arg1Of | and,"," |
R12783 | T16615 | T16614 | arg1Of | and,"," |
R12784 | T16616 | T16615 | arg2Of | resuspended,and |
R12785 | T16616 | T16617 | arg1Of | resuspended,in |
R12786 | T16616 | T16623 | arg1Of | resuspended,before |
R12787 | T16616 | T16625 | arg1Of | resuspended,on |
R12788 | T16618 | T16619 | arg1Of | 2,% |
R12789 | T16622 | T16617 | arg2Of | solution,in |
R12790 | T16622 | T16618 | arg1Of | solution,2 |
R12791 | T16622 | T16620 | arg1Of | solution,formaldehyde |
R12792 | T16622 | T16621 | arg1Of | solution,fixative |
R12793 | T16624 | T16623 | arg2Of | acquisition,before |
R12794 | T16627 | T16625 | arg2Of | FACSCalibur,on |
R12795 | T16627 | T16626 | arg1Of | FACSCalibur,a |
R12796 | T16627 | T16628 | arg1Of | FACSCalibur,( |
R12797 | T16629 | T16628 | arg2Of | BD,( |
R12798 | T16630 | T16628 | arg3Of | ),( |
R12675 | T16516 | T16515 | arg1Of | assess,To |
R12676 | T16518 | T16516 | arg2Of | production,assess |
R12677 | T16518 | T16517 | arg1Of | production,cytokine |
R12678 | T16520 | T16516 | arg1Of | cells,assess |
bionlp-st-ge-2016-spacy-parsed
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T16385 | 0-8 | NNP | denotes | Cytokine |
T16386 | 9-12 | CC | denotes | and |
T16387 | 13-20 | NN | denotes | surface |
T16388 | 21-27 | NN | denotes | marker |
T16389 | 28-36 | VBG | denotes | staining |
T16390 | 36-37 | . | denotes | . |
T16391 | 38-40 | TO | denotes | To |
T16392 | 41-47 | VB | denotes | assess |
T16393 | 48-56 | JJ | denotes | cytokine |
T16394 | 57-67 | NN | denotes | production |
T16395 | 67-68 | , | denotes | , |
T16396 | 69-74 | NNS | denotes | cells |
T16397 | 75-79 | VBD | denotes | were |
T16398 | 80-92 | VBN | denotes | restimulated |
T16399 | 93-97 | IN | denotes | with |
T16400 | 98-100 | CD | denotes | 10 |
T16401 | 101-103 | NNP | denotes | nM |
T16402 | 104-107 | NNP | denotes | PMA |
T16403 | 108-109 | VBD | denotes | + |
T16404 | 110-111 | CD | denotes | 1 |
T16405 | 112-114 | NNP | denotes | μM |
T16406 | 115-124 | NN | denotes | ionomycin |
T16407 | 125-128 | IN | denotes | for |
T16408 | 129-130 | CD | denotes | 6 |
T16409 | 131-132 | NN | denotes | h |
T16410 | 133-134 | -LRB- | denotes | ( |
T16411 | 134-140 | IN | denotes | unless |
T16412 | 141-150 | VBN | denotes | indicated |
T16413 | 151-160 | RB | denotes | otherwise |
T16414 | 161-163 | IN | denotes | in |
T16415 | 164-167 | DT | denotes | the |
T16416 | 168-175 | NNS | denotes | figures |
T16417 | 175-176 | -RRB- | denotes | ) |
T16418 | 176-177 | , | denotes | , |
T16419 | 178-181 | CC | denotes | and |
T16420 | 182-195 | JJ | denotes | intracellular |
T16421 | 196-204 | NN | denotes | cytokine |
T16422 | 205-211 | NNS | denotes | stains |
T16423 | 212-216 | VBD | denotes | were |
T16424 | 217-226 | VBN | denotes | performed |
T16425 | 227-229 | IN | denotes | as |
T16426 | 230-240 | RB | denotes | previously |
T16427 | 241-250 | VBN | denotes | described |
T16428 | 251-252 | -LRB- | denotes | ( |
T16429 | 252-254 | CD | denotes | 28 |
T16430 | 254-255 | -RRB- | denotes | ) |
T16431 | 255-256 | . | denotes | . |
T16432 | 257-259 | TO | denotes | To |
T16433 | 260-266 | VB | denotes | detect |
T16434 | 267-277 | NN | denotes | expression |
T16435 | 278-280 | IN | denotes | of |
T16436 | 281-288 | NN | denotes | surface |
T16437 | 289-298 | NNS | denotes | molecules |
T16438 | 298-299 | , | denotes | , |
T16439 | 300-305 | NNS | denotes | cells |
T16440 | 306-310 | VBD | denotes | were |
T16441 | 311-317 | VBN | denotes | washed |
T16442 | 318-320 | IN | denotes | in |
T16443 | 321-324 | NNP | denotes | PBS |
T16444 | 324-325 | , | denotes | , |
T16445 | 326-337 | VBD | denotes | resuspended |
T16446 | 338-340 | IN | denotes | in |
T16447 | 341-345 | NNP | denotes | FACS |
T16448 | 346-350 | VBP | denotes | wash |
T16449 | 351-357 | NN | denotes | buffer |
T16450 | 358-359 | -LRB- | denotes | ( |
T16451 | 359-360 | CD | denotes | 3 |
T16452 | 360-361 | NN | denotes | % |
T16453 | 362-365 | NNP | denotes | FBS |
T16454 | 365-366 | , | denotes | , |
T16455 | 367-370 | CD | denotes | 0.1 |
T16456 | 370-371 | NN | denotes | % |
T16457 | 372-378 | NN | denotes | sodium |
T16458 | 379-384 | NN | denotes | azide |
T16459 | 384-385 | , | denotes | , |
T16460 | 386-388 | CD | denotes | 30 |
T16461 | 389-391 | NNP | denotes | mM |
T16462 | 392-397 | NNP | denotes | Hepes |
T16463 | 397-398 | , | denotes | , |
T16464 | 399-400 | CD | denotes | 1 |
T16465 | 400-401 | CD | denotes | × |
T16466 | 402-405 | NNP | denotes | PBS |
T16467 | 405-406 | -RRB- | denotes | ) |
T16468 | 407-417 | VBG | denotes | containing |
T16469 | 418-421 | DT | denotes | the |
T16470 | 422-432 | NNS | denotes | antibodies |
T16471 | 433-442 | VBD | denotes | indicated |
T16472 | 443-445 | IN | denotes | in |
T16473 | 446-449 | DT | denotes | the |
T16474 | 450-457 | NNS | denotes | figures |
T16475 | 458-460 | IN | denotes | at |
T16476 | 461-471 | RB | denotes | previously |
T16477 | 472-481 | VBN | denotes | optimized |
T16478 | 482-496 | NNS | denotes | concentrations |
T16479 | 496-497 | , | denotes | , |
T16480 | 498-507 | VBN | denotes | incubated |
T16481 | 508-511 | IN | denotes | for |
T16482 | 512-514 | CD | denotes | 15 |
T16483 | 515-518 | NN | denotes | min |
T16484 | 519-521 | IN | denotes | at |
T16485 | 522-526 | NN | denotes | room |
T16486 | 527-538 | NN | denotes | temperature |
T16487 | 539-540 | -LRB- | denotes | ( |
T16488 | 540-542 | NNP | denotes | RT |
T16489 | 542-543 | -RRB- | denotes | ) |
T16490 | 543-544 | , | denotes | , |
T16491 | 545-551 | VBD | denotes | washed |
T16492 | 551-552 | , | denotes | , |
T16493 | 553-556 | CC | denotes | and |
T16494 | 557-568 | VBD | denotes | resuspended |
T16495 | 569-571 | IN | denotes | in |
T16496 | 572-573 | CD | denotes | 2 |
T16497 | 573-574 | NN | denotes | % |
T16498 | 575-587 | NN | denotes | formaldehyde |
T16499 | 588-596 | JJ | denotes | fixative |
T16500 | 597-605 | NN | denotes | solution |
T16501 | 606-612 | IN | denotes | before |
T16502 | 613-624 | NN | denotes | acquisition |
T16503 | 625-627 | IN | denotes | on |
T16504 | 628-629 | DT | denotes | a |
T16505 | 630-641 | NNP | denotes | FACSCalibur |
T16506 | 642-643 | -LRB- | denotes | ( |
T16507 | 643-645 | NNP | denotes | BD |
T16508 | 645-646 | -RRB- | denotes | ) |
T16509 | 646-647 | . | denotes | . |
R12545 | T16385 | T16385 | ROOT | Cytokine,Cytokine |
R12546 | T16386 | T16385 | cc | and,Cytokine |
R12547 | T16387 | T16388 | compound | surface,marker |
R12548 | T16388 | T16385 | conj | marker,Cytokine |
R12549 | T16389 | T16385 | acl | staining,Cytokine |
R12550 | T16390 | T16385 | punct | .,Cytokine |
R12551 | T16391 | T16392 | aux | To,assess |
R12552 | T16392 | T16398 | advcl | assess,restimulated |
R12553 | T16393 | T16394 | amod | cytokine,production |
R12554 | T16394 | T16392 | dobj | production,assess |
R12555 | T16395 | T16398 | punct | ",",restimulated |
R12556 | T16396 | T16398 | nsubjpass | cells,restimulated |
R12557 | T16397 | T16398 | auxpass | were,restimulated |
R12558 | T16398 | T16398 | ROOT | restimulated,restimulated |
R12559 | T16399 | T16398 | prep | with,restimulated |
R12560 | T16400 | T16403 | nummod | 10,+ |
R12561 | T16401 | T16402 | compound | nM,PMA |
R12562 | T16402 | T16403 | nsubj | PMA,+ |
R12563 | T16403 | T16398 | advcl | +,restimulated |
R12564 | T16404 | T16405 | nummod | 1,μM |
R12565 | T16405 | T16406 | compound | μM,ionomycin |
R12566 | T16406 | T16403 | dobj | ionomycin,+ |
R12567 | T16407 | T16403 | prep | for,+ |
R12568 | T16408 | T16409 | nummod | 6,h |
R12569 | T16409 | T16407 | pobj | h,for |
R12570 | T16410 | T16412 | punct | (,indicated |
R12571 | T16411 | T16412 | mark | unless,indicated |
R12572 | T16412 | T16403 | advcl | indicated,+ |
R12573 | T16413 | T16412 | advmod | otherwise,indicated |
R12574 | T16414 | T16412 | prep | in,indicated |
R12575 | T16415 | T16416 | det | the,figures |
R12576 | T16416 | T16414 | pobj | figures,in |
R12577 | T16417 | T16412 | punct | ),indicated |
R12578 | T16418 | T16412 | punct | ",",indicated |
R12579 | T16419 | T16412 | cc | and,indicated |
R12580 | T16420 | T16422 | amod | intracellular,stains |
R12581 | T16421 | T16422 | compound | cytokine,stains |
R12582 | T16422 | T16424 | nsubjpass | stains,performed |
R12583 | T16423 | T16424 | auxpass | were,performed |
R12584 | T16424 | T16412 | conj | performed,indicated |
R12585 | T16425 | T16427 | mark | as,described |
R12586 | T16426 | T16427 | advmod | previously,described |
R12587 | T16427 | T16424 | advcl | described,performed |
R12588 | T16428 | T16427 | punct | (,described |
R12589 | T16429 | T16427 | npadvmod | 28,described |
R12590 | T16430 | T16427 | punct | ),described |
R12591 | T16431 | T16403 | punct | .,+ |
R12592 | T16432 | T16433 | aux | To,detect |
R12593 | T16433 | T16441 | advcl | detect,washed |
R12594 | T16434 | T16433 | dobj | expression,detect |
R12595 | T16435 | T16434 | prep | of,expression |
R12596 | T16436 | T16437 | compound | surface,molecules |
R12597 | T16437 | T16435 | pobj | molecules,of |
R12598 | T16438 | T16441 | punct | ",",washed |
R12599 | T16439 | T16441 | nsubjpass | cells,washed |
R12600 | T16440 | T16441 | auxpass | were,washed |
R12601 | T16441 | T16441 | ROOT | washed,washed |
R12602 | T16442 | T16441 | prep | in,washed |
R12603 | T16443 | T16442 | pobj | PBS,in |
R12604 | T16444 | T16441 | punct | ",",washed |
R12605 | T16445 | T16441 | conj | resuspended,washed |
R12606 | T16446 | T16448 | mark | in,wash |
R12607 | T16447 | T16448 | nsubj | FACS,wash |
R12608 | T16448 | T16471 | meta | wash,indicated |
R12609 | T16449 | T16448 | dobj | buffer,wash |
R12610 | T16450 | T16453 | punct | (,FBS |
R12611 | T16451 | T16452 | nummod | 3,% |
R12612 | T16452 | T16453 | npadvmod | %,FBS |
R12613 | T16453 | T16471 | nsubj | FBS,indicated |
R12614 | T16454 | T16453 | punct | ",",FBS |
R12615 | T16455 | T16456 | nummod | 0.1,% |
R12616 | T16456 | T16458 | compound | %,azide |
R12617 | T16457 | T16458 | compound | sodium,azide |
R12618 | T16458 | T16453 | appos | azide,FBS |
R12619 | T16459 | T16458 | punct | ",",azide |
R12620 | T16460 | T16462 | nummod | 30,Hepes |
R12621 | T16461 | T16462 | compound | mM,Hepes |
R12622 | T16462 | T16458 | appos | Hepes,azide |
R12623 | T16463 | T16462 | punct | ",",Hepes |
R12624 | T16464 | T16466 | nummod | 1,PBS |
R12625 | T16465 | T16466 | nummod | ×,PBS |
R12626 | T16466 | T16462 | appos | PBS,Hepes |
R12627 | T16467 | T16462 | punct | ),Hepes |
R12628 | T16468 | T16458 | acl | containing,azide |
R12629 | T16469 | T16470 | det | the,antibodies |
R12630 | T16470 | T16468 | dobj | antibodies,containing |
R12631 | T16471 | T16441 | conj | indicated,washed |
R12632 | T16472 | T16471 | prep | in,indicated |
R12633 | T16473 | T16474 | det | the,figures |
R12634 | T16474 | T16472 | pobj | figures,in |
R12635 | T16475 | T16471 | prep | at,indicated |
R12636 | T16476 | T16477 | advmod | previously,optimized |
R12637 | T16477 | T16478 | amod | optimized,concentrations |
R12638 | T16478 | T16475 | pobj | concentrations,at |
R12639 | T16479 | T16471 | punct | ",",indicated |
R12640 | T16480 | T16491 | nsubj | incubated,washed |
R12641 | T16481 | T16480 | prep | for,incubated |
R12642 | T16482 | T16483 | nummod | 15,min |
R12643 | T16483 | T16481 | pobj | min,for |
R12644 | T16484 | T16483 | prep | at,min |
R12645 | T16485 | T16486 | compound | room,temperature |
R12646 | T16486 | T16484 | pobj | temperature,at |
R12647 | T16487 | T16488 | punct | (,RT |
R12648 | T16488 | T16483 | parataxis | RT,min |
R12649 | T16489 | T16488 | punct | ),RT |
R12650 | T16490 | T16483 | punct | ",",min |
R12651 | T16491 | T16471 | conj | washed,indicated |
R12652 | T16492 | T16491 | punct | ",",washed |
R12653 | T16493 | T16491 | cc | and,washed |
R12654 | T16494 | T16491 | conj | resuspended,washed |
R12655 | T16495 | T16494 | prep | in,resuspended |
R12656 | T16496 | T16497 | nummod | 2,% |
R12657 | T16497 | T16500 | nmod | %,solution |
R12658 | T16498 | T16500 | nmod | formaldehyde,solution |
R12659 | T16499 | T16500 | amod | fixative,solution |
R12660 | T16500 | T16495 | pobj | solution,in |
R12661 | T16501 | T16500 | prep | before,solution |
R12662 | T16502 | T16501 | pobj | acquisition,before |
R12663 | T16503 | T16502 | prep | on,acquisition |
R12664 | T16504 | T16505 | det | a,FACSCalibur |
R12665 | T16505 | T16503 | pobj | FACSCalibur,on |
R12666 | T16506 | T16507 | punct | (,BD |
R12667 | T16507 | T16505 | appos | BD,FACSCalibur |
R12668 | T16508 | T16505 | punct | ),FACSCalibur |
R12669 | T16509 | T16441 | punct | .,washed |
GO-BP
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T16376 | 48-67 | http://purl.obolibrary.org/obo/GO_0001816 | denotes | cytokine production |
T16377 | 48-74 | http://purl.obolibrary.org/obo/GO_0002369 | denotes | cytokine production, cells |
T16378 | 48-74 | http://purl.obolibrary.org/obo/GO_0002370 | denotes | cytokine production, cells |
T16379 | 48-74 | http://purl.obolibrary.org/obo/GO_0002371 | denotes | cytokine production, cells |
T16380 | 48-74 | http://purl.obolibrary.org/obo/GO_0032762 | denotes | cytokine production, cells |
T16381 | 48-74 | http://purl.obolibrary.org/obo/GO_0002368 | denotes | cytokine production, cells |
T16382 | 48-74 | http://purl.obolibrary.org/obo/GO_0035744 | denotes | cytokine production, cells |
T16383 | 48-74 | http://purl.obolibrary.org/obo/GO_0035745 | denotes | cytokine production, cells |
T16384 | 540-542 | http://purl.obolibrary.org/obo/GO_0003964 | denotes | RT |
GO-MF
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T16634 | 422-432 | http://purl.obolibrary.org/obo/GO_0003823 | denotes | antibodies |
T16635 | 540-542 | http://purl.obolibrary.org/obo/GO_0003964 | denotes | RT |
GO-CC
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T16636 | 69-74 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
T16637 | 300-305 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
T16638 | 182-195 | http://purl.obolibrary.org/obo/GO_0005622 | denotes | intracellular |
T16639 | 422-432 | http://purl.obolibrary.org/obo/GO_0019815 | denotes | antibodies |
T16640 | 422-432 | http://purl.obolibrary.org/obo/GO_0042571 | denotes | antibodies |
sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T16373 | 0-37 | Sentence | denotes | Cytokine and surface marker staining. |
T16374 | 38-256 | Sentence | denotes | To assess cytokine production, cells were restimulated with 10 nM PMA + 1 μM ionomycin for 6 h (unless indicated otherwise in the figures), and intracellular cytokine stains were performed as previously described (28). |
T16375 | 257-647 | Sentence | denotes | To detect expression of surface molecules, cells were washed in PBS, resuspended in FACS wash buffer (3% FBS, 0.1% sodium azide, 30 mM Hepes, 1× PBS) containing the antibodies indicated in the figures at previously optimized concentrations, incubated for 15 min at room temperature (RT), washed, and resuspended in 2% formaldehyde fixative solution before acquisition on a FACSCalibur (BD). |
T179 | 0-37 | Sentence | denotes | Cytokine and surface marker staining. |
T180 | 38-256 | Sentence | denotes | To assess cytokine production, cells were restimulated with 10 nM PMA + 1 μM ionomycin for 6 h (unless indicated otherwise in the figures), and intracellular cytokine stains were performed as previously described (28). |
T181 | 257-647 | Sentence | denotes | To detect expression of surface molecules, cells were washed in PBS, resuspended in FACS wash buffer (3% FBS, 0.1% sodium azide, 30 mM Hepes, 1× PBS) containing the antibodies indicated in the figures at previously optimized concentrations, incubated for 15 min at room temperature (RT), washed, and resuspended in 2% formaldehyde fixative solution before acquisition on a FACSCalibur (BD). |