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PMC:2626671 / 11874-13130 JSONTXT

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pmc-enju-pas

Id Subject Object Predicate Lexical cue
T19474 10-20 NN denotes Regulation
T19475 21-23 IN denotes of
T19476 24-32 NN denotes perforin
T19477 32-33 -COMMA- denotes ,
T19478 34-42 NN denotes granzyme
T19479 43-44 NN denotes B
T19480 44-45 -COMMA- denotes ,
T19481 46-49 CC denotes and
T19482 50-55 NN denotes IFN-γ
T19483 56-66 NN denotes expression
T19484 67-69 IN denotes by
T19485 70-75 NN denotes T-bet
T19486 76-79 CC denotes and
T19487 80-85 NN denotes Eomes
T19488 86-88 IN denotes in
T19489 89-104 VB denotes differentiating
T19490 105-110 NN denotes CTLs.
T19491 111-112 -LRB- denotes (
T19492 112-113 NN denotes A
T19493 113-114 -RRB- denotes )
T19494 115-120 NN denotes IFN-γ
T19495 121-131 NN denotes expression
T19496 132-134 IN denotes by
T19497 135-137 NN denotes WT
T19498 138-139 -LRB- denotes (
T19499 139-147 NN denotes Tbx21+/+
T19500 147-148 -RRB- denotes )
T19501 149-152 CC denotes and
T19502 153-168 JJ denotes T-bet–deficient
T19503 169-170 -LRB- denotes (
T19504 170-178 NN denotes Tbx21−/−
T19505 178-179 -RRB- denotes )
T19506 180-181 NN denotes T
T19507 182-187 NN denotes cells
T19508 189-194 JJ denotes Naive
T19509 195-199 JJ denotes CD8+
T19510 200-201 NN denotes T
T19511 202-207 NN denotes cells
T19512 207-208 -COMMA- denotes ,
T19513 209-211 CC denotes or
T19514 212-217 NN denotes cells
T19515 218-227 VB denotes activated
T19516 228-231 CC denotes and
T19517 232-240 VB denotes cultured
T19518 241-244 IN denotes for
T19519 245-246 CD denotes 4
T19520 247-249 CC denotes or
T19521 250-251 CD denotes 6
T19522 252-253 NN denotes d
T19523 253-254 -COMMA- denotes ,
T19524 255-259 VB denotes were
T19525 260-272 VB denotes restimulated
T19526 273-277 IN denotes with
T19527 278-281 NN denotes PMA
T19528 282-285 CC denotes and
T19529 286-295 NN denotes ionomycin
T19530 296-299 IN denotes for
T19531 300-301 CD denotes 6
T19532 302-303 NN denotes h
T19533 303-304 -COMMA- denotes ,
T19534 305-308 CC denotes and
T19535 309-314 NN denotes IFN-γ
T19536 315-325 NN denotes expression
T19537 326-329 VB denotes was
T19538 330-338 VB denotes assessed
T19539 339-341 IN denotes by
T19540 342-355 JJ denotes intracellular
T19541 356-364 NN denotes staining
T19542 366-373 NN denotes Numbers
T19543 374-378 VB denotes show
T19544 379-382 DT denotes the
T19545 383-393 NN denotes percentage
T19546 394-396 IN denotes of
T19547 397-403 JJ denotes IFN-γ+
T19548 404-410 NN denotes cells.
T19549 411-412 -LRB- denotes (
T19550 412-413 NN denotes B
T19551 413-414 -RRB- denotes )
T19552 415-423 JJ denotes Northern
T19553 424-428 NN denotes blot
T19554 429-437 NN denotes analysis
T19555 438-440 IN denotes of
T19556 441-445 NN denotes Prf1
T19557 446-449 CC denotes and
T19558 450-454 NN denotes GzmB
T19559 455-459 NN denotes mRNA
T19560 460-470 NN denotes expression
T19561 471-473 IN denotes in
T19562 474-476 NN denotes WT
T19563 477-479 CC denotes or
T19564 480-495 JJ denotes T-bet–deficient
T19565 496-500 JJ denotes CD8+
T19566 501-502 NN denotes T
T19567 503-508 NN denotes cells
T19568 509-518 VB denotes activated
T19569 519-522 CC denotes and
T19570 523-529 CC denotes either
T19571 530-534 JJ denotes left
T19572 535-545 JJ denotes uninfected
T19573 546-547 -LRB- denotes (
T19574 547-552 JJ denotes uninf
T19575 552-553 -RRB- denotes )
T19576 554-556 CC denotes or
T19577 557-567 VB denotes transduced
T19578 568-572 IN denotes with
T19579 573-585 NN denotes retroviruses
T19580 586-596 VB denotes expressing
T19581 597-607 NN denotes Eomes-VP16
T19582 608-609 -LRB- denotes (
T19583 609-616 NN denotes Eo-VP16
T19584 616-617 -RRB- denotes )
T19585 618-620 CC denotes or
T19586 621-623 DT denotes an
T19587 624-629 JJ denotes empty
T19588 630-638 NN denotes IRES-GFP
T19589 639-647 NN denotes cassette
T19590 648-649 -LRB- denotes (
T19591 649-652 NN denotes GFP
T19592 652-653 -RRB- denotes )
T19593 655-660 JJ denotes Total
T19594 661-669 JJ denotes cellular
T19595 670-673 NN denotes RNA
T19596 674-677 VB denotes was
T19597 678-686 VB denotes analyzed
T19598 687-689 IN denotes on
T19599 690-693 NN denotes day
T19600 694-695 CD denotes 6
T19601 696-698 IN denotes of
T19602 699-706 NN denotes culture
T19603 708-711 DT denotes The
T19604 712-721 NN denotes frequency
T19605 722-724 IN denotes of
T19606 725-735 VB denotes transduced
T19607 736-741 NN denotes cells
T19608 742-744 IN denotes in
T19609 745-748 DT denotes the
T19610 749-757 NN denotes cultures
T19611 758-761 VB denotes was
T19612 762-772 JJ denotes equivalent
T19613 773-776 IN denotes for
T19614 777-781 DT denotes both
T19615 782-792 NN denotes constructs
T19616 793-794 -LRB- denotes (
T19617 794-800 CD denotes ∼65–70
T19618 800-801 NN denotes %
T19619 802-806 NN denotes GFP+
T19620 807-812 NN denotes cells
T19621 812-813 -COLON- denotes ;
T19622 814-817 RB denotes not
T19623 818-826 VB denotes depicted
T19624 826-827 -RRB- denotes )
T19625 827-828 -LRB- denotes .
T19626 829-830 NN denotes (
T19627 830-831 -RRB- denotes C
T19628 831-839 NN denotes ) Granzy
T19629 839-840 NN denotes m
T19630 840-843 CC denotes e B
T19631 844-849 NN denotes and I
T19632 849-859 NN denotes FN-γ expre
T19633 859-861 IN denotes ss
T19634 861-869 NN denotes ion by T
T19635 869-872 CC denotes bx2
T19636 872-880 NN denotes 1+/+ and
T19637 881-882 NN denotes T
T19638 882-887 NN denotes bx21−
T19639 887-895 VB denotes /− T cel
T19640 895-897 IN denotes ls
T19641 898-910 VB denotes analyzed in
T19642 910-915 NN denotes resti
T19643 915-919 WDT denotes mula
T19644 919-922 VB denotes ted
T19645 923-927 VB denotes cell
T19646 927-935 VB denotes s that h
T19647 935-938 IN denotes ad
T19648 938-939 CD denotes b
T19649 939-941 NN denotes ee
T19650 941-942 -LRB- denotes n
T19651 943-944 NN denotes c
T19652 944-945 -RRB- denotes u
T19653 945-950 NN denotes lture
T19654 950-960 NN denotes d for 5 d.
T19655 961-963 IN denotes (D
T19656 963-968 NN denotes ) IFN
T19657 968-978 VB denotes -γ product
T19658 978-982 IN denotes ion
T19659 982-989 NN denotes by cell
T19660 989-991 CC denotes s
T19661 991-998 NN denotes transdu
T19662 998-999 -LRB- denotes c
T19663 999-1002 NN denotes ed
T19664 1002-1003 -RRB- denotes w
T19665 1003-1015 NN denotes ith Eo-VP16
T19666 1015-1016 -LRB- denotes o
T19667 1016-1018 NN denotes r
T19668 1018-1019 -RRB- denotes c
T19669 1019-1027 VB denotes ontrol (
T19670 1027-1029 IN denotes GF
T19671 1029-1032 NN denotes P)
T19672 1032-1033 CD denotes r
T19673 1033-1038 IN denotes etrov
T19674 1038-1039 CD denotes i
T19675 1039-1040 NN denotes r
T19676 1040-1042 IN denotes us
T19677 1042-1055 NN denotes es (RV) measu
T19678 1055-1059 IN denotes red
T19679 1059-1062 NN denotes on
T19680 1062-1065 CC denotes day
T19681 1066-1075 NN denotes 4 after 6
T19682 1119-1126 NN denotes Numbers
T19683 1127-1131 VB denotes show
T19684 1132-1135 DT denotes the
T19685 1136-1146 NN denotes percentage
T19686 1147-1149 IN denotes of
T19687 1150-1154 JJ denotes GFP+
T19688 1155-1161 JJ denotes IFN-γ+
T19689 1162-1167 NN denotes cells
T19690 1169-1176 NN denotes Results
T19691 1177-1180 VB denotes are
T19692 1181-1195 JJ denotes representative
T19693 1196-1198 IN denotes of
T19694 1199-1204 CD denotes three
T19695 1205-1206 -LRB- denotes (
T19696 1206-1207 NN denotes A
T19697 1208-1211 CC denotes and
T19698 1212-1213 NN denotes C
T19699 1213-1214 -RRB- denotes )
T19700 1215-1217 CC denotes or
T19701 1218-1221 CD denotes two
T19702 1222-1223 -LRB- denotes (
T19703 1223-1224 NN denotes B
T19704 1225-1228 CC denotes and
T19705 1229-1230 NN denotes D
T19706 1230-1231 -RRB- denotes )
T19707 1232-1243 JJ denotes independent
T19708 1244-1255 NN denotes experiments
R15127 T19474 T19475 arg1Of Regulation,of
R15128 T19474 T19488 arg1Of Regulation,in
R15129 T19476 T19477 arg1Of perforin,","
R15130 T19477 T19481 arg1Of ",",and
R15131 T19479 T19477 arg2Of B,","
R15132 T19479 T19478 arg1Of B,granzyme
R15133 T19481 T19475 arg2Of and,of
R15134 T19481 T19480 arg1Of and,","
R15135 T19481 T19484 arg1Of and,by
R15136 T19483 T19481 arg2Of expression,and
R15137 T19483 T19482 arg1Of expression,IFN-γ
R15138 T19485 T19486 arg1Of T-bet,and
R15139 T19486 T19484 arg2Of and,by
R15140 T19487 T19486 arg2Of Eomes,and
R15141 T19489 T19488 arg2Of differentiating,in
R15142 T19489 T19496 arg1Of differentiating,by
R15143 T19490 T19491 arg1Of CTLs.,(
R15144 T19492 T19491 arg2Of A,(
R15145 T19493 T19491 arg3Of ),(
R15146 T19495 T19489 arg2Of expression,differentiating
R15147 T19495 T19490 arg1Of expression,CTLs.
R15148 T19495 T19494 arg1Of expression,IFN-γ
R15149 T19497 T19498 arg1Of WT,(
R15150 T19497 T19501 arg1Of WT,and
R15151 T19499 T19498 arg2Of Tbx21+/+,(
R15152 T19500 T19498 arg3Of ),(
R15153 T19501 T19496 arg2Of and,by
R15154 T19504 T19503 arg2Of Tbx21−/−,(
R15155 T19505 T19503 arg3Of ),(
R15156 T19507 T19501 arg2Of cells,and
R15157 T19507 T19502 arg1Of cells,T-bet–deficient
R15158 T19507 T19503 arg1Of cells,(
R15159 T19507 T19506 arg1Of cells,T
R15160 T19511 T19508 arg1Of cells,Naive
R15161 T19511 T19509 arg1Of cells,CD8+
R15162 T19511 T19510 arg1Of cells,T
R15163 T19511 T19513 arg1Of cells,or
R15164 T19513 T19512 arg1Of or,","
R15165 T19513 T19524 arg1Of or,were
R15166 T19513 T19525 arg2Of or,restimulated
R15167 T19514 T19513 arg2Of cells,or
R15168 T19514 T19515 arg2Of cells,activated
R15169 T19514 T19517 arg2Of cells,cultured
R15170 T19515 T19516 arg1Of activated,and
R15171 T19517 T19516 arg2Of cultured,and
R15172 T19517 T19518 arg1Of cultured,for
R15173 T19519 T19520 arg1Of 4,or
R15174 T19521 T19520 arg2Of 6,or
R15175 T19522 T19518 arg2Of d,for
R15176 T19522 T19519 arg1Of d,4
R15177 T19522 T19521 arg1Of d,6
R15178 T19525 T19523 arg1Of restimulated,","
R15179 T19525 T19524 arg2Of restimulated,were
R15180 T19525 T19526 arg1Of restimulated,with
R15181 T19525 T19530 arg1Of restimulated,for
R15182 T19525 T19534 arg1Of restimulated,and
R15183 T19527 T19528 arg1Of PMA,and
R15184 T19528 T19526 arg2Of and,with
R15185 T19529 T19528 arg2Of ionomycin,and
R15186 T19532 T19530 arg2Of h,for
R15187 T19532 T19531 arg1Of h,6
R15188 T19534 T19533 arg1Of and,","
R15189 T19536 T19535 arg1Of expression,IFN-γ
R15190 T19536 T19537 arg1Of expression,was
R15191 T19536 T19538 arg2Of expression,assessed
R15192 T19538 T19534 arg2Of assessed,and
R15193 T19538 T19537 arg2Of assessed,was
R15194 T19541 T19538 arg1Of staining,assessed
R15195 T19541 T19539 arg2Of staining,by
R15196 T19541 T19540 arg1Of staining,intracellular
R15197 T19542 T19543 arg1Of Numbers,show
R15198 T19545 T19543 arg2Of percentage,show
R15199 T19545 T19544 arg1Of percentage,the
R15200 T19545 T19546 arg1Of percentage,of
R15201 T19545 T19549 arg1Of percentage,(
R15202 T19548 T19546 arg2Of cells.,of
R15203 T19548 T19547 arg1Of cells.,IFN-γ+
R15204 T19550 T19549 arg2Of B,(
R15205 T19551 T19549 arg3Of ),(
R15206 T19554 T19543 arg3Of analysis,show
R15207 T19554 T19552 arg1Of analysis,Northern
R15208 T19554 T19553 arg1Of analysis,blot
R15209 T19554 T19555 arg1Of analysis,of
R15210 T19556 T19557 arg1Of Prf1,and
R15211 T19558 T19557 arg2Of GzmB,and
R15212 T19560 T19555 arg2Of expression,of
R15213 T19560 T19556 arg1Of expression,Prf1
R15214 T19560 T19558 arg1Of expression,GzmB
R15215 T19560 T19559 arg1Of expression,mRNA
R15216 T19560 T19561 arg1Of expression,in
R15217 T19562 T19563 arg1Of WT,or
R15218 T19564 T19563 arg2Of T-bet–deficient,or
R15219 T19567 T19561 arg2Of cells,in
R15220 T19567 T19562 arg1Of cells,WT
R15221 T19567 T19564 arg1Of cells,T-bet–deficient
R15222 T19567 T19565 arg1Of cells,CD8+
R15223 T19567 T19566 arg1Of cells,T
R15224 T19567 T19568 arg2Of cells,activated
R15225 T19567 T19572 arg1Of cells,uninfected
R15226 T19567 T19577 arg2Of cells,transduced
R15227 T19568 T19569 arg1Of activated,and
R15228 T19569 T19576 arg1Of and,or
R15229 T19572 T19569 arg2Of uninfected,and
R15230 T19572 T19570 arg1Of uninfected,either
R15231 T19572 T19571 arg1Of uninfected,left
R15232 T19572 T19573 arg1Of uninfected,(
R15233 T19574 T19573 arg2Of uninf,(
R15234 T19575 T19573 arg3Of ),(
R15235 T19577 T19576 arg2Of transduced,or
R15236 T19577 T19578 arg1Of transduced,with
R15237 T19579 T19578 arg2Of retroviruses,with
R15238 T19579 T19580 arg1Of retroviruses,expressing
R15239 T19581 T19582 arg1Of Eomes-VP16,(
R15240 T19581 T19585 arg1Of Eomes-VP16,or
R15241 T19583 T19582 arg2Of Eo-VP16,(
R15242 T19584 T19582 arg3Of ),(
R15243 T19585 T19580 arg2Of or,expressing
R15244 T19589 T19585 arg2Of cassette,or
R15245 T19589 T19586 arg1Of cassette,an
R15246 T19589 T19587 arg1Of cassette,empty
R15247 T19589 T19588 arg1Of cassette,IRES-GFP
R15248 T19589 T19590 arg1Of cassette,(
R15249 T19591 T19590 arg2Of GFP,(
R15250 T19592 T19590 arg3Of ),(
R15251 T19595 T19593 arg1Of RNA,Total
R15252 T19595 T19594 arg1Of RNA,cellular
R15253 T19595 T19596 arg1Of RNA,was
R15254 T19595 T19597 arg2Of RNA,analyzed
R15255 T19597 T19596 arg2Of analyzed,was
R15256 T19597 T19598 arg1Of analyzed,on
R15257 T19599 T19598 arg2Of day,on
R15258 T19599 T19600 arg1Of day,6
R15259 T19599 T19601 arg1Of day,of
R15260 T19602 T19601 arg2Of culture,of
R15261 T19604 T19603 arg1Of frequency,The
R15262 T19604 T19605 arg1Of frequency,of
R15263 T19604 T19608 arg1Of frequency,in
R15264 T19604 T19611 arg1Of frequency,was
R15265 T19604 T19612 arg1Of frequency,equivalent
R15266 T19607 T19605 arg2Of cells,of
R15267 T19607 T19606 arg2Of cells,transduced
R15268 T19610 T19608 arg2Of cultures,in
R15269 T19610 T19609 arg1Of cultures,the
R15270 T19612 T19611 arg2Of equivalent,was
R15271 T19612 T19613 arg1Of equivalent,for
R15272 T19615 T19613 arg2Of constructs,for
R15273 T19615 T19614 arg1Of constructs,both
R15274 T19617 T19618 arg1Of ∼65–70,%
R15275 T19620 T19616 arg2Of cells,(
R15276 T19620 T19617 arg1Of cells,∼65–70
R15277 T19620 T19619 arg1Of cells,GFP+
R15278 T19626 T19625 arg2Of (,.
R15279 T19627 T19625 arg3Of C,.
R15280 T19629 T19628 arg1Of m,) Granzy
R15281 T19629 T19630 arg1Of m,e B
R15282 T19630 T19625 arg1Of e B,.
R15283 T19632 T19630 arg2Of FN-γ expre,e B
R15284 T19632 T19631 arg1Of FN-γ expre,and I
R15285 T19634 T19635 arg1Of ion by T,bx2
R15286 T19636 T19635 arg2Of 1+/+ and,bx2
R15287 T19638 T19633 arg2Of bx21−,ss
R15288 T19638 T19634 arg1Of bx21−,ion by T
R15289 T19638 T19636 arg1Of bx21−,1+/+ and
R15290 T19638 T19637 arg1Of bx21−,T
R15291 T19638 T19639 arg2Of bx21−,/− T cel
R15292 T19638 T19643 arg1Of bx21−,mula
R15293 T19638 T19644 arg1Of bx21−,ted
R15294 T19638 T19645 arg1Of bx21−,cell
R15295 T19638 T19646 arg2Of bx21−,s that h
R15296 T19639 T19640 arg1Of /− T cel,ls
R15297 T19642 T19640 arg2Of resti,ls
R15298 T19642 T19641 arg2Of resti,analyzed in
R15299 T19646 T19644 arg2Of s that h,ted
R15300 T19646 T19645 arg2Of s that h,cell
R15301 T19646 T19647 arg1Of s that h,ad
R15302 T19649 T19648 arg1Of ee,b
R15303 T19649 T19650 arg1Of ee,n
R15304 T19651 T19650 arg2Of c,n
R15305 T19652 T19650 arg3Of u,n
R15306 T19654 T19647 arg2Of d for 5 d.,ad
R15307 T19654 T19649 arg1Of d for 5 d.,ee
R15308 T19654 T19653 arg1Of d for 5 d.,lture
R15309 T19656 T19655 arg2Of ) IFN,(D
R15310 T19656 T19657 arg2Of ) IFN,-γ product
R15311 T19657 T19658 arg1Of -γ product,ion
R15312 T19659 T19660 arg1Of by cell,s
R15313 T19660 T19658 arg2Of s ,ion
R15314 T19663 T19662 arg2Of ed ,c
R15315 T19664 T19662 arg3Of w,c
R15316 T19665 T19660 arg2Of ith Eo-VP16 ,s
R15317 T19665 T19661 arg1Of ith Eo-VP16 ,transdu
R15318 T19665 T19662 arg1Of ith Eo-VP16 ,c
R15319 T19665 T19666 arg1Of ith Eo-VP16 ,o
R15320 T19665 T19669 arg2Of ith Eo-VP16 ,ontrol (
R15321 T19667 T19666 arg2Of r ,o
R15322 T19668 T19666 arg3Of c,o
R15323 T19669 T19670 arg1Of ontrol (,GF
R15324 T19669 T19673 arg1Of ontrol (,etrov
R15325 T19671 T19670 arg2Of P) ,GF
R15326 T19671 T19672 arg1Of P) ,r
R15327 T19675 T19673 arg2Of r,etrov
R15328 T19675 T19674 arg1Of r,i
R15329 T19675 T19676 arg1Of r,us
R15330 T19677 T19676 arg2Of es (RV) measu,us
R15331 T19677 T19678 arg1Of es (RV) measu,red
R15332 T19679 T19680 arg1Of on ,day
R15333 T19680 T19678 arg2Of day,red
R15334 T19681 T19680 arg2Of 4 after 6,day
R15335 T19682 T19683 arg1Of Numbers,show
R15336 T19685 T19683 arg2Of percentage,show
R15337 T19685 T19684 arg1Of percentage,the
R15338 T19685 T19686 arg1Of percentage,of
R15339 T19689 T19686 arg2Of cells,of
R15340 T19689 T19687 arg1Of cells,GFP+
R15341 T19689 T19688 arg1Of cells,IFN-γ+
R15342 T19690 T19691 arg1Of Results,are
R15343 T19690 T19692 arg1Of Results,representative
R15344 T19692 T19691 arg2Of representative,are
R15345 T19692 T19693 arg1Of representative,of
R15346 T19694 T19695 arg1Of three,(
R15347 T19694 T19700 arg1Of three,or
R15348 T19696 T19697 arg1Of A,and
R15349 T19697 T19695 arg2Of and,(
R15350 T19698 T19697 arg2Of C,and
R15351 T19699 T19695 arg3Of ),(
R15352 T19700 T19702 arg1Of or,(
R15353 T19701 T19700 arg2Of two,or
R15354 T19703 T19704 arg1Of B,and
R15355 T19704 T19702 arg2Of and,(
R15356 T19705 T19704 arg2Of D,and
R15357 T19706 T19702 arg3Of ),(
R15358 T19708 T19693 arg2Of experiments,of
R15359 T19708 T19694 arg1Of experiments,three
R15360 T19708 T19701 arg1Of experiments,two
R15361 T19708 T19707 arg1Of experiments,independent

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T19207 10-20 NN denotes Regulation
T19208 21-23 IN denotes of
T19209 24-32 NN denotes perforin
T19210 32-33 , denotes ,
T19211 34-42 NN denotes granzyme
T19212 43-44 NNP denotes B
T19213 44-45 , denotes ,
T19214 46-49 CC denotes and
T19215 50-55 NNP denotes IFN-γ
T19216 56-66 NN denotes expression
T19217 67-69 IN denotes by
T19218 70-75 NNP denotes T-bet
T19219 76-79 CC denotes and
T19220 80-85 NNP denotes Eomes
T19221 86-88 IN denotes in
T19222 89-104 VBG denotes differentiating
T19223 105-109 NNS denotes CTLs
T19224 109-110 . denotes .
T19225 111-112 -LRB- denotes (
T19226 112-113 NNP denotes A
T19227 113-114 -RRB- denotes )
T19228 115-120 JJ denotes IFN-γ
T19229 121-131 NN denotes expression
T19230 132-134 IN denotes by
T19231 135-137 NNP denotes WT
T19232 138-139 -LRB- denotes (
T19233 139-144 NNP denotes Tbx21
T19234 144-145 CD denotes +
T19235 145-146 CD denotes /
T19236 146-147 NN denotes +
T19237 147-148 -RRB- denotes )
T19238 149-152 CC denotes and
T19239 153-158 NNP denotes T-bet
T19240 159-168 NN denotes deficient
T19241 169-170 -LRB- denotes (
T19242 170-175 CD denotes Tbx21
T19243 175-176 CD denotes −
T19244 176-177 NN denotes /
T19245 177-178 NN denotes −
T19246 178-179 -RRB- denotes )
T19247 180-181 NN denotes T
T19248 182-187 NNS denotes cells
T19249 187-188 . denotes .
T19250 189-194 JJ denotes Naive
T19251 195-198 NNP denotes CD8
T19252 198-199 CD denotes +
T19253 200-201 NNP denotes T
T19254 202-207 NNS denotes cells
T19255 207-208 , denotes ,
T19256 209-211 CC denotes or
T19257 212-217 NNS denotes cells
T19258 218-227 VBN denotes activated
T19259 228-231 CC denotes and
T19260 232-240 VBN denotes cultured
T19261 241-244 IN denotes for
T19262 245-246 CD denotes 4
T19263 247-249 CC denotes or
T19264 250-251 CD denotes 6
T19265 252-253 LS denotes d
T19266 253-254 , denotes ,
T19267 255-259 VBD denotes were
T19268 260-272 VBN denotes restimulated
T19269 273-277 IN denotes with
T19270 278-281 NNP denotes PMA
T19271 282-285 CC denotes and
T19272 286-295 NN denotes ionomycin
T19273 296-299 IN denotes for
T19274 300-301 CD denotes 6
T19275 302-303 NN denotes h
T19276 303-304 , denotes ,
T19277 305-308 CC denotes and
T19278 309-314 NNP denotes IFN-γ
T19279 315-325 NN denotes expression
T19280 326-329 VBD denotes was
T19281 330-338 VBN denotes assessed
T19282 339-341 IN denotes by
T19283 342-355 JJ denotes intracellular
T19284 356-364 NN denotes staining
T19285 364-365 . denotes .
T19286 366-373 NNS denotes Numbers
T19287 374-378 VBP denotes show
T19288 379-382 DT denotes the
T19289 383-393 NN denotes percentage
T19290 394-396 IN denotes of
T19291 397-402 JJ denotes IFN-γ
T19292 402-403 NN denotes +
T19293 404-409 NNS denotes cells
T19294 409-410 . denotes .
T19295 411-412 -LRB- denotes (
T19296 412-413 NNP denotes B
T19297 413-414 -RRB- denotes )
T19298 415-423 NNP denotes Northern
T19299 424-428 NN denotes blot
T19300 429-437 NN denotes analysis
T19301 438-440 IN denotes of
T19302 441-445 NNP denotes Prf1
T19303 446-449 CC denotes and
T19304 450-454 NNP denotes GzmB
T19305 455-459 NNP denotes mRNA
T19306 460-470 NN denotes expression
T19307 471-473 IN denotes in
T19308 474-476 NNP denotes WT
T19309 477-479 CC denotes or
T19310 480-485 NNP denotes T-bet
T19311 486-495 JJ denotes deficient
T19312 496-499 NNP denotes CD8
T19313 499-500 CD denotes +
T19314 501-502 NNP denotes T
T19315 503-508 NNS denotes cells
T19316 509-518 VBN denotes activated
T19317 519-522 CC denotes and
T19318 523-529 RB denotes either
T19319 530-534 VBD denotes left
T19320 535-545 JJ denotes uninfected
T19321 546-547 -LRB- denotes (
T19322 547-552 JJ denotes uninf
T19323 552-553 -RRB- denotes )
T19324 554-556 CC denotes or
T19325 557-567 VBN denotes transduced
T19326 568-572 IN denotes with
T19327 573-585 NNS denotes retroviruses
T19328 586-596 VBG denotes expressing
T19329 597-607 NNP denotes Eomes-VP16
T19330 608-609 -LRB- denotes (
T19331 609-616 NNP denotes Eo-VP16
T19332 616-617 -RRB- denotes )
T19333 618-620 CC denotes or
T19334 621-623 DT denotes an
T19335 624-629 JJ denotes empty
T19336 630-638 NNP denotes IRES-GFP
T19337 639-647 NN denotes cassette
T19338 648-649 -LRB- denotes (
T19339 649-652 NNP denotes GFP
T19340 652-653 -RRB- denotes )
T19341 653-654 . denotes .
T19342 655-660 JJ denotes Total
T19343 661-669 JJ denotes cellular
T19344 670-673 NNP denotes RNA
T19345 674-677 VBD denotes was
T19346 678-686 VBN denotes analyzed
T19347 687-689 IN denotes on
T19348 690-693 NN denotes day
T19349 694-695 CD denotes 6
T19350 696-698 IN denotes of
T19351 699-706 NN denotes culture
T19352 706-707 . denotes .
T19353 708-711 DT denotes The
T19354 712-721 NN denotes frequency
T19355 722-724 IN denotes of
T19356 725-735 JJ denotes transduced
T19357 736-741 NNS denotes cells
T19358 742-744 IN denotes in
T19359 745-748 DT denotes the
T19360 749-757 NNS denotes cultures
T19361 758-761 VBD denotes was
T19362 762-772 JJ denotes equivalent
T19363 773-776 IN denotes for
T19364 777-781 DT denotes both
T19365 782-792 NNS denotes constructs
T19366 793-794 -LRB- denotes (
T19367 794-795 CD denotes ∼
T19368 795-797 CD denotes 65
T19369 798-800 CD denotes 70
T19370 800-801 NN denotes %
T19371 802-805 NNP denotes GFP
T19372 805-806 CD denotes +
T19373 807-812 NNS denotes cells
T19374 812-813 : denotes ;
T19375 814-817 RB denotes not
T19376 818-826 VBN denotes depicted
T19377 826-827 -RRB- denotes )
T19378 827-828 . denotes .
T19379 829-830 -LRB- denotes (
T19380 830-831 NNP denotes C
T19381 831-832 -RRB- denotes )
T19382 833-841 NNP denotes Granzyme
T19383 842-843 NNP denotes B
T19384 844-847 CC denotes and
T19385 848-853 NNP denotes IFN-γ
T19386 854-864 NN denotes expression
T19387 865-867 IN denotes by
T19388 868-873 NNP denotes Tbx21
T19389 873-874 NNP denotes +
T19390 874-875 VBD denotes /
T19391 875-876 CD denotes +
T19392 877-880 CC denotes and
T19393 881-886 CD denotes Tbx21
T19394 886-887 CD denotes −
T19395 887-888 NN denotes /
T19396 888-889 CD denotes −
T19397 890-891 NNP denotes T
T19398 892-897 NNS denotes cells
T19399 898-906 VBD denotes analyzed
T19400 907-909 IN denotes in
T19401 910-922 JJ denotes restimulated
T19402 923-928 NNS denotes cells
T19403 929-933 WDT denotes that
T19404 934-937 VBD denotes had
T19405 938-942 VBN denotes been
T19406 943-951 VBN denotes cultured
T19407 952-955 IN denotes for
T19408 956-957 CD denotes 5
T19409 958-960 NN denotes d.
T19410 961-962 -LRB- denotes (
T19411 962-963 NNP denotes D
T19412 963-964 -RRB- denotes )
T19413 965-970 JJ denotes IFN-γ
T19414 971-981 NN denotes production
T19415 982-984 IN denotes by
T19416 985-990 NNS denotes cells
T19417 991-1001 VBN denotes transduced
T19418 1002-1006 IN denotes with
T19419 1007-1014 NN denotes Eo-VP16
T19420 1015-1017 CC denotes or
T19421 1018-1025 NN denotes control
T19422 1026-1027 -LRB- denotes (
T19423 1027-1030 NNP denotes GFP
T19424 1030-1031 -RRB- denotes )
T19425 1032-1044 NNS denotes retroviruses
T19426 1045-1046 -LRB- denotes (
T19427 1046-1048 NN denotes RV
T19428 1048-1049 -RRB- denotes )
T19429 1050-1058 VBN denotes measured
T19430 1059-1061 IN denotes on
T19431 1062-1065 NN denotes day
T19432 1066-1067 CD denotes 4
T19433 1068-1073 IN denotes after
T19434 1074-1075 CD denotes 6
T19435 1076-1077 NN denotes h
T19436 1078-1080 IN denotes of
T19437 1081-1094 NN denotes restimulation
T19438 1095-1099 IN denotes with
T19439 1100-1103 NNP denotes PMA
T19440 1104-1107 CC denotes and
T19441 1108-1117 NN denotes ionomycin
T19442 1117-1118 . denotes .
T19443 1119-1126 NNS denotes Numbers
T19444 1127-1131 VBP denotes show
T19445 1132-1135 DT denotes the
T19446 1136-1146 NN denotes percentage
T19447 1147-1149 IN denotes of
T19448 1150-1153 NNP denotes GFP
T19449 1153-1154 VBP denotes +
T19450 1155-1160 JJ denotes IFN-γ
T19451 1160-1161 NN denotes +
T19452 1162-1167 NNS denotes cells
T19453 1167-1168 . denotes .
T19454 1169-1176 NNS denotes Results
T19455 1177-1180 VBP denotes are
T19456 1181-1195 NN denotes representative
T19457 1196-1198 IN denotes of
T19458 1199-1204 CD denotes three
T19459 1205-1206 -LRB- denotes (
T19460 1206-1207 DT denotes A
T19461 1208-1211 CC denotes and
T19462 1212-1213 NNP denotes C
T19463 1213-1214 -RRB- denotes )
T19464 1215-1217 CC denotes or
T19465 1218-1221 CD denotes two
T19466 1222-1223 -LRB- denotes (
T19467 1223-1224 NN denotes B
T19468 1225-1228 CC denotes and
T19469 1229-1230 NNP denotes D
T19470 1230-1231 -RRB- denotes )
T19471 1232-1243 JJ denotes independent
T19472 1244-1255 NNS denotes experiments
T19473 1255-1256 . denotes .
R14860 T19207 T19207 ROOT Regulation,Regulation
R14861 T19208 T19207 prep of,Regulation
R14862 T19209 T19208 pobj perforin,of
R14863 T19210 T19207 punct ",",Regulation
R14864 T19211 T19212 compound granzyme,B
R14865 T19212 T19207 appos B,Regulation
R14866 T19213 T19207 punct ",",Regulation
R14867 T19214 T19207 cc and,Regulation
R14868 T19215 T19216 compound IFN-γ,expression
R14869 T19216 T19207 conj expression,Regulation
R14870 T19217 T19207 prep by,Regulation
R14871 T19218 T19217 pobj T-bet,by
R14872 T19219 T19218 cc and,T-bet
R14873 T19220 T19218 conj Eomes,T-bet
R14874 T19221 T19207 prep in,Regulation
R14875 T19222 T19221 pcomp differentiating,in
R14876 T19223 T19222 dobj CTLs,differentiating
R14877 T19224 T19207 punct .,Regulation
R14878 T19225 T19226 punct (,A
R14879 T19226 T19229 nmod A,expression
R14880 T19227 T19226 punct ),A
R14881 T19228 T19229 amod IFN-γ,expression
R14882 T19229 T19229 ROOT expression,expression
R14883 T19230 T19229 prep by,expression
R14884 T19231 T19230 pobj WT,by
R14885 T19232 T19236 punct (,+
R14886 T19233 T19236 nmod Tbx21,+
R14887 T19234 T19235 compound +,/
R14888 T19235 T19233 nummod /,Tbx21
R14889 T19236 T19231 appos +,WT
R14890 T19237 T19236 punct ),+
R14891 T19238 T19231 cc and,WT
R14892 T19239 T19231 conj T-bet,WT
R14893 T19240 T19229 appos deficient,expression
R14894 T19241 T19240 punct (,deficient
R14895 T19242 T19243 nummod Tbx21,−
R14896 T19243 T19245 nummod −,−
R14897 T19244 T19245 compound /,−
R14898 T19245 T19240 appos −,deficient
R14899 T19246 T19240 punct ),deficient
R14900 T19247 T19248 compound T,cells
R14901 T19248 T19229 appos cells,expression
R14902 T19249 T19229 punct .,expression
R14903 T19250 T19254 amod Naive,cells
R14904 T19251 T19254 nmod CD8,cells
R14905 T19252 T19254 nummod +,cells
R14906 T19253 T19254 compound T,cells
R14907 T19254 T19268 nsubjpass cells,restimulated
R14908 T19255 T19254 punct ",",cells
R14909 T19256 T19254 cc or,cells
R14910 T19257 T19254 conj cells,cells
R14911 T19258 T19257 acl activated,cells
R14912 T19259 T19258 cc and,activated
R14913 T19260 T19258 conj cultured,activated
R14914 T19261 T19260 prep for,cultured
R14915 T19262 T19265 nummod 4,d
R14916 T19263 T19262 cc or,4
R14917 T19264 T19262 conj 6,4
R14918 T19265 T19261 pobj d,for
R14919 T19266 T19268 punct ",",restimulated
R14920 T19267 T19268 auxpass were,restimulated
R14921 T19268 T19268 ROOT restimulated,restimulated
R14923 T19270 T19269 pobj PMA,with
R14924 T19271 T19270 cc and,PMA
R14925 T19272 T19270 conj ionomycin,PMA
R14926 T19273 T19268 prep for,restimulated
R14927 T19274 T19275 nummod 6,h
R14928 T19275 T19273 pobj h,for
R14929 T19276 T19268 punct ",",restimulated
R14930 T19277 T19268 cc and,restimulated
R14931 T19278 T19279 compound IFN-γ,expression
R14932 T19279 T19281 nsubjpass expression,assessed
R14933 T19280 T19281 auxpass was,assessed
R14934 T19281 T19268 conj assessed,restimulated
R14935 T19282 T19281 agent by,assessed
R14936 T19283 T19284 amod intracellular,staining
R14937 T19284 T19282 pobj staining,by
R14938 T19285 T19281 punct .,assessed
R14939 T19286 T19287 nsubj Numbers,show
R14940 T19287 T19287 ROOT show,show
R14941 T19288 T19289 det the,percentage
R14942 T19289 T19287 dobj percentage,show
R14943 T19290 T19289 prep of,percentage
R14944 T19291 T19293 amod IFN-γ,cells
R14945 T19292 T19293 compound +,cells
R14946 T19293 T19290 pobj cells,of
R14947 T19294 T19287 punct .,show
R14948 T19295 T19300 punct (,analysis
R14949 T19296 T19300 nmod B,analysis
R14950 T19297 T19296 punct ),B
R14951 T19298 T19299 compound Northern,blot
R14952 T19299 T19300 compound blot,analysis
R14953 T19300 T19300 ROOT analysis,analysis
R14954 T19301 T19300 prep of,analysis
R14955 T19302 T19301 pobj Prf1,of
R14956 T19303 T19302 cc and,Prf1
R14957 T19304 T19305 compound GzmB,mRNA
R14958 T19305 T19306 compound mRNA,expression
R14959 T19306 T19300 conj expression,analysis
R14960 T19307 T19300 prep in,analysis
R14961 T19308 T19307 pobj WT,in
R14962 T19309 T19308 cc or,WT
R14963 T19310 T19308 conj T-bet,WT
R14964 T19311 T19315 amod deficient,cells
R14965 T19312 T19315 nmod CD8,cells
R14966 T19313 T19315 nummod +,cells
R14967 T19314 T19315 compound T,cells
R14968 T19315 T19300 appos cells,analysis
R14969 T19316 T19315 acl activated,cells
R14970 T19317 T19316 cc and,activated
R14971 T19318 T19319 preconj either,left
R14972 T19319 T19316 conj left,activated
R14973 T19320 T19319 oprd uninfected,left
R14974 T19321 T19322 punct (,uninf
R14975 T19322 T19320 dep uninf,uninfected
R14976 T19323 T19322 punct ),uninf
R14977 T19324 T19322 cc or,uninf
R14978 T19325 T19322 conj transduced,uninf
R14979 T19326 T19325 prep with,transduced
R14980 T19327 T19328 nsubj retroviruses,expressing
R14981 T19328 T19326 pcomp expressing,with
R14982 T19329 T19328 dobj Eomes-VP16,expressing
R14983 T19330 T19331 punct (,Eo-VP16
R14984 T19331 T19329 appos Eo-VP16,Eomes-VP16
R14985 T19332 T19331 punct ),Eo-VP16
R14986 T19333 T19329 cc or,Eomes-VP16
R14987 T19334 T19337 det an,cassette
R14988 T19335 T19337 amod empty,cassette
R14989 T19336 T19337 compound IRES-GFP,cassette
R14990 T19337 T19329 conj cassette,Eomes-VP16
R14991 T19338 T19339 punct (,GFP
R14992 T19339 T19337 appos GFP,cassette
R14993 T19340 T19300 punct ),analysis
R14994 T19341 T19300 punct .,analysis
R14995 T19342 T19344 amod Total,RNA
R14996 T19343 T19344 amod cellular,RNA
R14997 T19344 T19346 nsubjpass RNA,analyzed
R14998 T19345 T19346 auxpass was,analyzed
R14999 T19346 T19346 ROOT analyzed,analyzed
R15000 T19347 T19346 prep on,analyzed
R15001 T19348 T19347 pobj day,on
R15002 T19349 T19348 nummod 6,day
R15003 T19350 T19348 prep of,day
R15004 T19351 T19350 pobj culture,of
R15005 T19352 T19346 punct .,analyzed
R15006 T19353 T19354 det The,frequency
R15007 T19354 T19361 nsubj frequency,was
R15008 T19355 T19354 prep of,frequency
R15009 T19356 T19357 amod transduced,cells
R15010 T19357 T19355 pobj cells,of
R15011 T19358 T19354 prep in,frequency
R15012 T19359 T19360 det the,cultures
R15013 T19360 T19358 pobj cultures,in
R15014 T19361 T19361 ROOT was,was
R15015 T19362 T19361 acomp equivalent,was
R15016 T19363 T19362 prep for,equivalent
R15017 T19364 T19365 det both,constructs
R15018 T19365 T19363 pobj constructs,for
R15019 T19366 T19376 punct (,depicted
R15020 T19367 T19368 nummod ∼,65
R15021 T19368 T19369 quantmod 65,70
R15022 T19369 T19370 nummod 70,%
R15023 T19370 T19376 nsubj %,depicted
R15024 T19371 T19373 nmod GFP,cells
R15025 T19372 T19373 nummod +,cells
R15026 T19373 T19370 appos cells,%
R15027 T19374 T19370 punct ;,%
R15028 T19375 T19376 neg not,depicted
R15029 T19376 T19361 parataxis depicted,was
R15030 T19377 T19376 punct ),depicted
R15031 T19378 T19361 punct .,was
R15032 T19379 T19386 punct (,expression
R15033 T19380 T19386 nmod C,expression
R15034 T19381 T19380 punct ),C
R15035 T19382 T19383 compound Granzyme,B
R15036 T19383 T19380 appos B,C
R15037 T19384 T19383 cc and,B
R15038 T19385 T19386 compound IFN-γ,expression
R15039 T19386 T19414 nmod expression,production
R15040 T19387 T19386 prep by,expression
R15041 T19388 T19387 pobj Tbx21,by
R15042 T19389 T19390 compound +,/
R15043 T19390 T19390 ROOT /,/
R15044 T19391 T19395 nummod +,/
R15045 T19392 T19391 cc and,+
R15046 T19393 T19394 nummod Tbx21,−
R15047 T19394 T19391 conj −,+
R15048 T19395 T19390 dobj /,/
R15049 T19396 T19398 nummod −,cells
R15050 T19397 T19398 compound T,cells
R15051 T19398 T19395 appos cells,/
R15052 T19399 T19398 acl analyzed,cells
R15053 T19400 T19399 prep in,analyzed
R15054 T19401 T19402 amod restimulated,cells
R15055 T19402 T19400 pobj cells,in
R15056 T19403 T19406 nsubjpass that,cultured
R15057 T19404 T19406 aux had,cultured
R15058 T19405 T19406 auxpass been,cultured
R15059 T19406 T19402 relcl cultured,cells
R15060 T19407 T19406 prep for,cultured
R15061 T19408 T19409 nummod 5,d.
R15062 T19409 T19407 pobj d.,for
R15063 T19410 T19411 punct (,D
R15064 T19411 T19409 appos D,d.
R15065 T19412 T19390 punct ),/
R15066 T19413 T19414 amod IFN-γ,production
R15067 T19414 T19414 ROOT production,production
R15068 T19415 T19414 prep by,production
R15069 T19416 T19415 pobj cells,by
R15070 T19417 T19416 acl transduced,cells
R15071 T19418 T19417 prep with,transduced
R15072 T19419 T19418 pobj Eo-VP16,with
R15073 T19420 T19419 cc or,Eo-VP16
R15074 T19421 T19419 conj control,Eo-VP16
R15075 T19422 T19419 punct (,Eo-VP16
R15076 T19423 T19419 appos GFP,Eo-VP16
R15077 T19424 T19419 punct ),Eo-VP16
R15078 T19425 T19419 appos retroviruses,Eo-VP16
R15079 T19426 T19425 punct (,retroviruses
R15080 T19427 T19425 appos RV,retroviruses
R15081 T19428 T19425 punct ),retroviruses
R15082 T19429 T19414 acl measured,production
R15083 T19430 T19429 prep on,measured
R15084 T19431 T19430 pobj day,on
R15085 T19432 T19431 nummod 4,day
R15086 T19433 T19431 prep after,day
R15087 T19434 T19435 nummod 6,h
R15088 T19435 T19433 pobj h,after
R15089 T19436 T19435 prep of,h
R15090 T19437 T19436 pobj restimulation,of
R15091 T19438 T19435 prep with,h
R15092 T19439 T19438 pobj PMA,with
R15093 T19440 T19439 cc and,PMA
R15094 T19441 T19439 conj ionomycin,PMA
R15095 T19442 T19414 punct .,production
R15096 T19443 T19444 nsubj Numbers,show
R15097 T19444 T19444 ROOT show,show
R15098 T19445 T19446 det the,percentage
R15099 T19446 T19444 dobj percentage,show
R15100 T19447 T19446 prep of,percentage
R15101 T19448 T19447 pobj GFP,of
R15102 T19449 T19452 amod +,cells
R15103 T19450 T19452 amod IFN-γ,cells
R15104 T19451 T19452 compound +,cells
R15105 T19452 T19446 conj cells,percentage
R15106 T19453 T19444 punct .,show
R15107 T19454 T19455 nsubj Results,are
R15108 T19455 T19455 ROOT are,are
R15109 T19456 T19455 attr representative,are
R15110 T19457 T19456 prep of,representative
R15111 T19458 T19472 nummod three,experiments
R15112 T19459 T19460 punct (,A
R15113 T19460 T19458 appos A,three
R15114 T19461 T19460 cc and,A
R15115 T19462 T19460 conj C,A
R15116 T19463 T19462 punct ),C
R15117 T19464 T19465 cc or,two
R15118 T19465 T19460 conj two,A
R15119 T19466 T19467 punct (,B
R15120 T19467 T19472 nmod B,experiments
R15121 T19468 T19467 cc and,B
R15122 T19469 T19467 conj D,B
R15123 T19470 T19467 punct ),B
R15124 T19471 T19472 amod independent,experiments
R15125 T19472 T19457 pobj experiments,of
R15126 T19473 T19455 punct .,are
R14922 T19269 T19268 prep with,restimulated

GO-BP

Id Subject Object Predicate Lexical cue
T19196 10-20 http://purl.obolibrary.org/obo/GO_0065007 denotes Regulation
T19197 212-227 http://purl.obolibrary.org/obo/GO_0001775 denotes cells activated
T19198 503-518 http://purl.obolibrary.org/obo/GO_0001775 denotes cells activated
T19199 661-669 http://purl.obolibrary.org/obo/GO_0007349 denotes cellular

GO-CC

Id Subject Object Predicate Lexical cue
T19748 182-187 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T19749 202-207 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T19750 212-217 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T19751 404-409 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T19752 503-508 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T19753 736-741 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T19754 807-812 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T19755 892-897 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T19756 923-928 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T19757 985-990 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T19758 1162-1167 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T19759 342-355 http://purl.obolibrary.org/obo/GO_0005622 denotes intracellular

sentences

Id Subject Object Predicate Lexical cue
T19200 10-188 Sentence denotes Regulation of perforin, granzyme B, and IFN-γ expression by T-bet and Eomes in differentiating CTLs. (A) IFN-γ expression by WT (Tbx21+/+) and T-bet–deficient (Tbx21−/−) T cells.
T19201 189-365 Sentence denotes Naive CD8+ T cells, or cells activated and cultured for 4 or 6 d, were restimulated with PMA and ionomycin for 6 h, and IFN-γ expression was assessed by intracellular staining.
T19202 366-654 Sentence denotes Numbers show the percentage of IFN-γ+ cells. (B) Northern blot analysis of Prf1 and GzmB mRNA expression in WT or T-bet–deficient CD8+ T cells activated and either left uninfected (uninf) or transduced with retroviruses expressing Eomes-VP16 (Eo-VP16) or an empty IRES-GFP cassette (GFP).
T19203 655-707 Sentence denotes Total cellular RNA was analyzed on day 6 of culture.
T19204 708-1118 Sentence denotes The frequency of transduced cells in the cultures was equivalent for both constructs (∼65–70% GFP+ cells; not depicted). (C) Granzyme B and IFN-γ expression by Tbx21+/+ and Tbx21−/− T cells analyzed in restimulated cells that had been cultured for 5 d. (D) IFN-γ production by cells transduced with Eo-VP16 or control (GFP) retroviruses (RV) measured on day 4 after 6 h of restimulation with PMA and ionomycin.
T19205 1119-1168 Sentence denotes Numbers show the percentage of GFP+ IFN-γ+ cells.
T19206 1169-1256 Sentence denotes Results are representative of three (A and C) or two (B and D) independent experiments.
T73 0-9 Sentence denotes Figure 2.
T74 10-188 Sentence denotes Regulation of perforin, granzyme B, and IFN-γ expression by T-bet and Eomes in differentiating CTLs. (A) IFN-γ expression by WT (Tbx21+/+) and T-bet–deficient (Tbx21−/−) T cells.
T75 189-365 Sentence denotes Naive CD8+ T cells, or cells activated and cultured for 4 or 6 d, were restimulated with PMA and ionomycin for 6 h, and IFN-γ expression was assessed by intracellular staining.
T76 366-654 Sentence denotes Numbers show the percentage of IFN-γ+ cells. (B) Northern blot analysis of Prf1 and GzmB mRNA expression in WT or T-bet–deficient CD8+ T cells activated and either left uninfected (uninf) or transduced with retroviruses expressing Eomes-VP16 (Eo-VP16) or an empty IRES-GFP cassette (GFP).
T77 655-707 Sentence denotes Total cellular RNA was analyzed on day 6 of culture.
T78 708-1118 Sentence denotes The frequency of transduced cells in the cultures was equivalent for both constructs (∼65–70% GFP+ cells; not depicted). (C) Granzyme B and IFN-γ expression by Tbx21+/+ and Tbx21−/− T cells analyzed in restimulated cells that had been cultured for 5 d. (D) IFN-γ production by cells transduced with Eo-VP16 or control (GFP) retroviruses (RV) measured on day 4 after 6 h of restimulation with PMA and ionomycin.
T79 1119-1168 Sentence denotes Numbers show the percentage of GFP+ IFN-γ+ cells.

events-check-again

Id Subject Object Predicate Lexical cue Speculation
T19976 10-20 Regulation denotes Regulation
T19977 10-20 Regulation denotes Regulation
T19978 10-20 Regulation denotes Regulation
T19979 10-20 Regulation denotes Regulation
T19980 10-20 Regulation denotes Regulation
T19981 10-20 Regulation denotes Regulation
T19982 24-32 Protein denotes perforin
T19983 34-44 Protein denotes granzyme B
T19984 50-55 Protein denotes IFN-γ
T19985 56-66 Gene_expression denotes expression
T19986 56-66 Gene_expression denotes expression
T19987 56-66 Gene_expression denotes expression
T19988 70-75 Protein denotes T-bet
T19989 80-85 Protein denotes Eomes
T19990 115-120 Protein denotes IFN-γ
T19991 121-131 Gene_expression denotes expression true
T19992 139-144 Protein denotes Tbx21
T19993 153-158 Protein denotes T-bet
T19994 159-168 Negative_regulation denotes deficient
T19995 170-175 Protein denotes Tbx21
T19996 195-198 Protein denotes CD8
T19997 309-314 Protein denotes IFN-γ
T19998 315-325 Gene_expression denotes expression true
T19999 397-402 Protein denotes IFN-γ
T20000 441-445 Protein denotes Prf1
T20001 450-454 Protein denotes GzmB
T20002 455-470 Transcription denotes mRNA expression true
T20003 455-470 Transcription denotes mRNA expression true
T20004 480-485 Protein denotes T-bet
T20005 486-495 Negative_regulation denotes deficient
T20006 496-499 Protein denotes CD8
T20007 586-596 Gene_expression denotes expressing
T20008 597-607 Protein denotes Eomes-VP16
T20009 609-616 Protein denotes Eo-VP16
T20010 635-638 Protein denotes GFP
T20011 833-843 Protein denotes Granzyme B
T20012 848-853 Protein denotes IFN-γ
T20013 854-864 Gene_expression denotes expression true
T20014 854-864 Gene_expression denotes expression true
T20015 868-873 Protein denotes Tbx21
T20016 881-886 Protein denotes Tbx21
T20017 965-970 Protein denotes IFN-γ
T20018 971-981 Gene_expression denotes production true
T20019 1007-1014 Protein denotes Eo-VP16
T20020 1027-1030 Protein denotes GFP
T20021 1150-1153 Protein denotes GFP
T20022 1155-1160 Protein denotes IFN-γ
R15474 T19982 T19987 themeOf perforin,expression
R15475 T19983 T19986 themeOf granzyme B,expression
R15476 T19984 T19985 themeOf IFN-γ,expression
R15477 T19985 T19977 themeOf expression,Regulation
R15478 T19985 T19976 themeOf expression,Regulation
R15479 T19986 T19981 themeOf expression,Regulation
R15480 T19986 T19980 themeOf expression,Regulation
R15481 T19987 T19978 themeOf expression,Regulation
R15482 T19987 T19979 themeOf expression,Regulation
R15483 T19988 T19977 causeOf T-bet,Regulation
R15484 T19988 T19978 causeOf T-bet,Regulation
R15485 T19988 T19980 causeOf T-bet,Regulation
R15486 T19989 T19981 causeOf Eomes,Regulation
R15487 T19989 T19976 causeOf Eomes,Regulation
R15488 T19989 T19979 causeOf Eomes,Regulation
R15489 T19990 T19991 themeOf IFN-γ,expression
R15490 T19993 T19994 themeOf T-bet,deficient
R15491 T19997 T19998 themeOf IFN-γ,expression
R15492 T20000 T20003 themeOf Prf1,mRNA expression
R15493 T20001 T20002 themeOf GzmB,mRNA expression
R15494 T20004 T20005 themeOf T-bet,deficient
R15495 T20008 T20007 themeOf Eomes-VP16,expressing
R15496 T20009 T20008 equivalentTo Eo-VP16,Eomes-VP16
R15497 T20011 T20013 themeOf Granzyme B,expression
R15498 T20012 T20014 themeOf IFN-γ,expression
R15499 T20017 T20018 themeOf IFN-γ,production

bionlp-st-ge-2016-reference-tees

Id Subject Object Predicate Lexical cue
T20023 24-32 Protein denotes perforin
T20024 34-44 Protein denotes granzyme B
T20025 50-55 Protein denotes IFN-γ
T20026 56-66 Gene_expression denotes expression
T20027 56-66 Gene_expression denotes expression
T20028 10-20 Regulation denotes Regulation
T20029 10-20 Regulation denotes Regulation
T20030 115-120 Protein denotes IFN-γ
T20031 135-137 Protein denotes WT
T20032 139-144 Protein denotes Tbx21
T20033 121-131 Gene_expression denotes expression
T20034 121-131 Gene_expression denotes expression
T20035 121-131 Gene_expression denotes expression
T20036 195-199 Protein denotes CD8+
T20037 309-314 Protein denotes IFN-γ
T20038 315-325 Gene_expression denotes expression
T20039 397-402 Protein denotes IFN-γ
T20040 441-445 Protein denotes Prf1
T20041 450-459 Protein denotes GzmB mRNA
T20042 496-499 Protein denotes CD8
T20043 603-607 Protein denotes VP16
T20044 609-616 Protein denotes Eo-VP16
T20045 460-470 Gene_expression denotes expression
T20046 460-470 Gene_expression denotes expression
T20047 586-596 Gene_expression denotes expressing
T20048 586-596 Gene_expression denotes expressing
T20049 833-843 Protein denotes Granzyme B
T20050 848-853 Protein denotes IFN-γ
T20051 868-873 Protein denotes Tbx21
T20052 881-886 Protein denotes Tbx21
T20053 854-864 Gene_expression denotes expression
T20054 854-864 Gene_expression denotes expression
T20055 965-970 Protein denotes IFN-γ
T20056 1007-1014 Protein denotes Eo-VP16
T20057 971-981 Gene_expression denotes production
T20058 1150-1160 Protein denotes GFP+ IFN-γ
R15500 T20023 T20026 themeOf perforin,expression
R15501 T20025 T20027 themeOf IFN-γ,expression
R15502 T20026 T20028 themeOf expression,Regulation
R15503 T20027 T20029 themeOf expression,Regulation
R15504 T20030 T20033 themeOf IFN-γ,expression
R15505 T20031 T20034 themeOf WT,expression
R15506 T20032 T20035 themeOf Tbx21,expression
R15507 T20037 T20038 themeOf IFN-γ,expression
R15508 T20040 T20045 themeOf Prf1,expression
R15509 T20041 T20046 themeOf GzmB mRNA,expression
R15510 T20043 T20047 themeOf VP16,expressing
R15511 T20044 T20048 themeOf Eo-VP16,expressing
R15512 T20049 T20053 themeOf Granzyme B,expression
R15513 T20050 T20054 themeOf IFN-γ,expression
R15514 T20055 T20057 themeOf IFN-γ,production

bionlp-st-ge-2016-reference

Id Subject Object Predicate Lexical cue Speculation
T19171 315-325 Gene_expression denotes expression true
T19172 397-402 Protein denotes IFN-γ
T19173 441-445 Protein denotes Prf1
T19174 450-454 Protein denotes GzmB
T19175 455-470 Transcription denotes mRNA expression true
T19176 455-470 Transcription denotes mRNA expression true
T19177 480-485 Protein denotes T-bet
T19178 486-495 Negative_regulation denotes deficient
T19179 496-499 Protein denotes CD8
T19180 586-596 Gene_expression denotes expressing
T19181 597-607 Protein denotes Eomes-VP16
T19182 609-616 Protein denotes Eo-VP16
T19183 635-638 Protein denotes GFP
T19184 833-843 Protein denotes Granzyme B
T19185 848-853 Protein denotes IFN-γ
T19186 854-864 Gene_expression denotes expression true
T19149 10-20 Regulation denotes Regulation
T19150 10-20 Regulation denotes Regulation
T19151 10-20 Regulation denotes Regulation
T19152 10-20 Regulation denotes Regulation
T19153 10-20 Regulation denotes Regulation
T19154 10-20 Regulation denotes Regulation
T19155 24-32 Protein denotes perforin
T19156 34-44 Protein denotes granzyme B
T19157 50-55 Protein denotes IFN-γ
T19158 56-66 Gene_expression denotes expression
T19159 56-66 Gene_expression denotes expression
T19160 56-66 Gene_expression denotes expression
T19161 70-75 Protein denotes T-bet
T19162 80-85 Protein denotes Eomes
T19163 115-120 Protein denotes IFN-γ
T19164 121-131 Gene_expression denotes expression true
T19165 139-144 Protein denotes Tbx21
T19166 153-158 Protein denotes T-bet
T19167 159-168 Negative_regulation denotes deficient
T19168 170-175 Protein denotes Tbx21
T19169 195-198 Protein denotes CD8
T19170 309-314 Protein denotes IFN-γ
T19187 854-864 Gene_expression denotes expression true
T19188 868-873 Protein denotes Tbx21
T19189 881-886 Protein denotes Tbx21
T19190 965-970 Protein denotes IFN-γ
T19191 971-981 Gene_expression denotes production true
T19192 1007-1014 Protein denotes Eo-VP16
T19193 1027-1030 Protein denotes GFP
T19194 1150-1153 Protein denotes GFP
T19195 1155-1160 Protein denotes IFN-γ
R14834 T19155 T19160 themeOf perforin,expression
R14835 T19156 T19159 themeOf granzyme B,expression
R14836 T19157 T19158 themeOf IFN-γ,expression
R14837 T19158 T19150 themeOf expression,Regulation
R14838 T19158 T19149 themeOf expression,Regulation
R14839 T19159 T19154 themeOf expression,Regulation
R14840 T19159 T19153 themeOf expression,Regulation
R14841 T19160 T19151 themeOf expression,Regulation
R14842 T19160 T19152 themeOf expression,Regulation
R14843 T19161 T19150 causeOf T-bet,Regulation
R14844 T19161 T19151 causeOf T-bet,Regulation
R14845 T19161 T19153 causeOf T-bet,Regulation
R14846 T19162 T19154 causeOf Eomes,Regulation
R14847 T19162 T19149 causeOf Eomes,Regulation
R14848 T19162 T19152 causeOf Eomes,Regulation
R14849 T19163 T19164 themeOf IFN-γ,expression
R14850 T19166 T19167 themeOf T-bet,deficient
R14851 T19170 T19171 themeOf IFN-γ,expression
R14852 T19173 T19176 themeOf Prf1,mRNA expression
R14853 T19174 T19175 themeOf GzmB,mRNA expression
R14854 T19177 T19178 themeOf T-bet,deficient
R14855 T19181 T19180 themeOf Eomes-VP16,expressing
R14856 T19182 T19181 equivalentTo Eo-VP16,Eomes-VP16
R14857 T19184 T19186 themeOf Granzyme B,expression
R14858 T19185 T19187 themeOf IFN-γ,expression
R14859 T19190 T19191 themeOf IFN-γ,production

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T19709 24-32 P14222 denotes perforin
T19710 34-44 P10144 denotes granzyme B
T19711 50-55 P01579 denotes IFN-γ
T19712 70-75 Q9UL17 denotes T-bet
T19713 80-85 O95936 denotes Eomes
T19714 115-120 P01579 denotes IFN-γ
T19715 139-144 Q9UL17 denotes Tbx21
T19716 153-158 Q9UL17 denotes T-bet
T19717 170-175 Q9UL17 denotes Tbx21
T19718 195-198 P01732 denotes CD8
T19719 195-198 P10966 denotes CD8
T19720 309-314 P01579 denotes IFN-γ
T19721 397-402 P01579 denotes IFN-γ
T19722 441-445 P14222 denotes Prf1
T19723 450-454 P10144 denotes GzmB
T19724 480-485 Q9UL17 denotes T-bet
T19725 496-499 P10966 denotes CD8
T19726 496-499 P01732 denotes CD8
T19727 597-602 O95936 denotes Eomes
T19728 609-616 O95936 denotes Eo-VP16
T19729 635-638 Q9U6Y4 denotes GFP
T19730 649-652 Q9U6Y4 denotes GFP
T19731 802-805 Q9U6Y4 denotes GFP
T19732 833-843 P10144 denotes Granzyme B
T19733 848-853 P01579 denotes IFN-γ
T19734 868-873 Q9UL17 denotes Tbx21
T19735 881-886 Q9UL17 denotes Tbx21
T19736 965-970 P01579 denotes IFN-γ
T19737 1007-1014 O95936 denotes Eo-VP16
T19738 1027-1030 Q9U6Y4 denotes GFP
T19739 1150-1153 Q9U6Y4 denotes GFP
T19740 1155-1160 P01579 denotes IFN-γ

test2

Id Subject Object Predicate Lexical cue Speculation
T19110 10-20 Regulation denotes Regulation
T19111 24-32 Protein denotes perforin
T19112 34-44 Protein denotes granzyme B
T19113 50-55 Protein denotes IFN-γ
T19114 56-66 Gene_expression denotes expression
T19115 70-75 Protein denotes T-bet
T19116 80-85 Protein denotes Eomes
T19117 115-120 Protein denotes IFN-γ
T19118 121-131 Gene_expression denotes expression
T19119 139-144 Protein denotes Tbx21 true
T19120 153-158 Protein denotes T-bet
T19121 159-168 Negative_regulation denotes deficient true
T19122 170-175 Protein denotes Tbx21 true
T19123 195-198 Protein denotes CD8 true
T19124 309-314 Protein denotes IFN-γ
T19125 315-325 Gene_expression denotes expression
T19126 397-402 Protein denotes IFN-γ true
T19127 441-445 Protein denotes Prf1 true
T19128 450-454 Protein denotes GzmB true
T19129 455-470 Transcription denotes mRNA expression
T19130 480-485 Protein denotes T-bet
T19131 486-495 Negative_regulation denotes deficient
T19132 496-499 Protein denotes CD8
T19133 586-596 Gene_expression denotes expressing
T19134 597-607 Protein denotes Eomes-VP16
T19135 609-616 Protein denotes Eo-VP16
T19136 635-638 Protein denotes GFP
T19137 833-843 Protein denotes Granzyme B
T19138 848-853 Protein denotes IFN-γ
T19139 854-864 Gene_expression denotes expression
T19140 868-873 Protein denotes Tbx21
T19141 881-886 Protein denotes Tbx21
T19142 965-970 Protein denotes IFN-γ
T19143 971-981 Gene_expression denotes production
T19144 991-1001 Positive_regulation denotes transduced
T19145 1007-1014 Protein denotes Eo-VP16
T19146 1027-1030 Protein denotes GFP
T19147 1150-1153 Protein denotes GFP
T19148 1155-1160 Protein denotes IFN-γ
R14816 T19111 T19114 themeOf perforin,expression
R14817 T19112 T19114 themeOf granzyme B,expression
R14818 T19113 T19114 themeOf IFN-γ,expression
R14819 T19114 T19110 themeOf expression,Regulation
R14820 T19115 T19110 causeOf T-bet,Regulation
R14821 T19116 T19110 causeOf Eomes,Regulation
R14822 T19117 T19118 themeOf IFN-γ,expression
R14823 T19120 T19121 themeOf T-bet,deficient
R14824 T19124 T19125 themeOf IFN-γ,expression
R14825 T19127 T19129 themeOf Prf1,mRNA expression
R14826 T19128 T19129 themeOf GzmB,mRNA expression
R14827 T19130 T19131 themeOf T-bet,deficient
R14828 T19134 T19133 themeOf Eomes-VP16,expressing
R14829 T19135 T19134 equivalentTo Eo-VP16,Eomes-VP16
R14830 T19137 T19139 themeOf Granzyme B,expression
R14831 T19138 T19139 themeOf IFN-γ,expression
R14832 T19142 T19143 themeOf IFN-γ,production
R14833 T19145 T19144 themeOf Eo-VP16,transduced