PMC:2626671 / 10052-10262 JSONTXT

Annnotations TAB JSON ListView MergeView

    pmc-enju-pas

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    bionlp-st-ge-2016-spacy-parsed

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    sentences

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    events-check-again

    {"project":"events-check-again","denotations":[{"id":"T5835","span":{"begin":0,"end":5},"obj":"Protein"},{"id":"T5836","span":{"begin":6,"end":21},"obj":"Transcription"},{"id":"T5837","span":{"begin":44,"end":54},"obj":"Gene_expression"},{"id":"T5838","span":{"begin":58,"end":62},"obj":"Protein"},{"id":"T5839","span":{"begin":80,"end":85},"obj":"Protein"},{"id":"T5840","span":{"begin":108,"end":117},"obj":"Gene_expression"},{"id":"T5841","span":{"begin":136,"end":148},"obj":"Gene_expression"},{"id":"T5842","span":{"begin":152,"end":160},"obj":"Protein"}],"relations":[{"id":"R4646","pred":"themeOf","subj":"T5835","obj":"T5836"},{"id":"R4647","pred":"themeOf","subj":"T5838","obj":"T5837"},{"id":"R4648","pred":"themeOf","subj":"T5839","obj":"T5840"},{"id":"R4649","pred":"themeOf","subj":"T5842","obj":"T5841"}],"text":"T-bet mRNA expression slightly preceded the expression of GzmB mRNA; similarly, Eomes mRNA and protein were expressed ∼1 d ahead of the reexpression of perforin mRNA and protein, respectively (Fig. 1, B and D)."}

    bionlp-st-ge-2016-reference-tees

    {"project":"bionlp-st-ge-2016-reference-tees","denotations":[{"id":"T5878","span":{"begin":58,"end":67},"obj":"Protein"},{"id":"T5879","span":{"begin":80,"end":90},"obj":"Protein"},{"id":"T5880","span":{"begin":152,"end":165},"obj":"Protein"},{"id":"T5881","span":{"begin":44,"end":54},"obj":"Gene_expression"},{"id":"T5882","span":{"begin":108,"end":117},"obj":"Gene_expression"},{"id":"T5883","span":{"begin":136,"end":148},"obj":"Gene_expression"},{"id":"T5884","span":{"begin":31,"end":39},"obj":"Positive_regulation"}],"relations":[{"id":"R4671","pred":"themeOf","subj":"T5878","obj":"T5881"},{"id":"R4672","pred":"themeOf","subj":"T5879","obj":"T5882"},{"id":"R4673","pred":"themeOf","subj":"T5880","obj":"T5883"},{"id":"R4674","pred":"themeOf","subj":"T5881","obj":"T5884"}],"text":"T-bet mRNA expression slightly preceded the expression of GzmB mRNA; similarly, Eomes mRNA and protein were expressed ∼1 d ahead of the reexpression of perforin mRNA and protein, respectively (Fig. 1, B and D)."}

    bionlp-st-ge-2016-reference

    {"project":"bionlp-st-ge-2016-reference","denotations":[{"id":"T4727","span":{"begin":0,"end":5},"obj":"Protein"},{"id":"T4728","span":{"begin":6,"end":21},"obj":"Transcription"},{"id":"T4729","span":{"begin":44,"end":54},"obj":"Gene_expression"},{"id":"T4730","span":{"begin":58,"end":62},"obj":"Protein"},{"id":"T4731","span":{"begin":80,"end":85},"obj":"Protein"},{"id":"T4732","span":{"begin":108,"end":117},"obj":"Gene_expression"},{"id":"T4733","span":{"begin":136,"end":148},"obj":"Gene_expression"},{"id":"T4734","span":{"begin":152,"end":160},"obj":"Protein"}],"relations":[{"id":"R3712","pred":"themeOf","subj":"T4730","obj":"T4729"},{"id":"R3713","pred":"themeOf","subj":"T4731","obj":"T4732"},{"id":"R3714","pred":"themeOf","subj":"T4734","obj":"T4733"},{"id":"R3711","pred":"themeOf","subj":"T4727","obj":"T4728"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}],"text":"T-bet mRNA expression slightly preceded the expression of GzmB mRNA; similarly, Eomes mRNA and protein were expressed ∼1 d ahead of the reexpression of perforin mRNA and protein, respectively (Fig. 1, B and D)."}

    bionlp-st-ge-2016-uniprot

    {"project":"bionlp-st-ge-2016-uniprot","denotations":[{"id":"T5476","span":{"begin":0,"end":5},"obj":"Q9UL17"},{"id":"T5477","span":{"begin":58,"end":62},"obj":"P10144"},{"id":"T5478","span":{"begin":80,"end":85},"obj":"O95936"},{"id":"T5479","span":{"begin":152,"end":160},"obj":"P14222"}],"namespaces":[{"prefix":"_base","uri":"http://www.uniprot.org/uniprot/"}],"text":"T-bet mRNA expression slightly preceded the expression of GzmB mRNA; similarly, Eomes mRNA and protein were expressed ∼1 d ahead of the reexpression of perforin mRNA and protein, respectively (Fig. 1, B and D)."}

    test2

    {"project":"test2","denotations":[{"id":"T4662","span":{"begin":0,"end":5},"obj":"Protein"},{"id":"T4663","span":{"begin":6,"end":21},"obj":"Transcription"},{"id":"T4664","span":{"begin":31,"end":39},"obj":"Positive_regulation"},{"id":"T4665","span":{"begin":44,"end":54},"obj":"Gene_expression"},{"id":"T4666","span":{"begin":58,"end":62},"obj":"Protein"},{"id":"T4667","span":{"begin":80,"end":85},"obj":"Protein"},{"id":"T4668","span":{"begin":108,"end":117},"obj":"Gene_expression"},{"id":"T4669","span":{"begin":136,"end":148},"obj":"Gene_expression"},{"id":"T4670","span":{"begin":152,"end":160},"obj":"Protein"}],"relations":[{"id":"R3664","pred":"themeOf","subj":"T4662","obj":"T4663"},{"id":"R3665","pred":"themeOf","subj":"T4665","obj":"T4664"},{"id":"R3666","pred":"themeOf","subj":"T4666","obj":"T4665"},{"id":"R3667","pred":"themeOf","subj":"T4667","obj":"T4668"},{"id":"R3668","pred":"themeOf","subj":"T4670","obj":"T4669"}],"attributes":[{"id":"M70","pred":"Negation","subj":"T4662","obj":"true"},{"id":"M71","pred":"Negation","subj":"T4663","obj":"true"}],"text":"T-bet mRNA expression slightly preceded the expression of GzmB mRNA; similarly, Eomes mRNA and protein were expressed ∼1 d ahead of the reexpression of perforin mRNA and protein, respectively (Fig. 1, B and D)."}