PMC:2222968 / 9057-9296
Annnotations
pmc-enju-pas
{"project":"pmc-enju-pas","denotations":[{"id":"T3400","span":{"begin":1,"end":3},"obj":"TO"},{"id":"T3401","span":{"begin":4,"end":7},"obj":"DT"},{"id":"T3402","span":{"begin":8,"end":13},"obj":"JJ"},{"id":"T3403","span":{"begin":14,"end":15},"obj":"NN"},{"id":"T3404","span":{"begin":16,"end":21},"obj":"NN"},{"id":"T3405","span":{"begin":22,"end":23},"obj":"-LRB-"},{"id":"T3406","span":{"begin":23,"end":29},"obj":"NN"},{"id":"T3407","span":{"begin":30,"end":32},"obj":"NN"},{"id":"T3408","span":{"begin":32,"end":33},"obj":"-RRB-"},{"id":"T3409","span":{"begin":35,"end":42},"obj":"IN"},{"id":"T3410","span":{"begin":43,"end":47},"obj":"NN"},{"id":"T3411","span":{"begin":48,"end":50},"obj":"VB"},{"id":"T3412","span":{"begin":51,"end":54},"obj":"DT"},{"id":"T3413","span":{"begin":55,"end":58},"obj":"JJ"},{"id":"T3414","span":{"begin":59,"end":62},"obj":"NN"},{"id":"T3415","span":{"begin":63,"end":71},"obj":"NN"},{"id":"T3416","span":{"begin":71,"end":72},"obj":"-COMMA-"},{"id":"T3417","span":{"begin":73,"end":76},"obj":"DT"},{"id":"T3418","span":{"begin":77,"end":87},"obj":"NN"},{"id":"T3419","span":{"begin":88,"end":90},"obj":"IN"},{"id":"T3420","span":{"begin":91,"end":95},"obj":"NN"},{"id":"T3421","span":{"begin":96,"end":99},"obj":"CC"},{"id":"T3422","span":{"begin":100,"end":105},"obj":"NN"},{"id":"T3423","span":{"begin":106,"end":108},"obj":"IN"},{"id":"T3424","span":{"begin":109,"end":116},"obj":"RB"},{"id":"T3425","span":{"begin":117,"end":125},"obj":"VB"},{"id":"T3426","span":{"begin":126,"end":130},"obj":"JJ"},{"id":"T3427","span":{"begin":131,"end":132},"obj":"NN"},{"id":"T3428","span":{"begin":133,"end":138},"obj":"NN"},{"id":"T3429","span":{"begin":139,"end":142},"obj":"VB"},{"id":"T3430","span":{"begin":143,"end":151},"obj":"VB"},{"id":"T3431","span":{"begin":152,"end":154},"obj":"IN"},{"id":"T3432","span":{"begin":155,"end":167},"obj":"NN"},{"id":"T3433","span":{"begin":168,"end":177},"obj":"VB"},{"id":"T3434","span":{"begin":178,"end":182},"obj":"NN"},{"id":"T3435","span":{"begin":183,"end":190},"obj":"NN"},{"id":"T3436","span":{"begin":191,"end":192},"obj":"-LRB-"},{"id":"T3437","span":{"begin":192,"end":196},"obj":"NN"},{"id":"T3438","span":{"begin":196,"end":197},"obj":"-RRB-"},{"id":"T3439","span":{"begin":199,"end":214},"obj":"JJ"},{"id":"T3440","span":{"begin":215,"end":220},"obj":"NN"},{"id":"T3441","span":{"begin":221,"end":225},"obj":"VB"},{"id":"T3442","span":{"begin":226,"end":230},"obj":"RB"},{"id":"T3443","span":{"begin":231,"end":239},"obj":"JJ"}],"relations":[{"id":"R2763","pred":"arg1Of","subj":"T3404","obj":"T3401"},{"id":"R2764","pred":"arg1Of","subj":"T3404","obj":"T3402"},{"id":"R2765","pred":"arg1Of","subj":"T3404","obj":"T3403"},{"id":"R2766","pred":"arg1Of","subj":"T3404","obj":"T3405"},{"id":"R2767","pred":"arg2Of","subj":"T3407","obj":"T3405"},{"id":"R2768","pred":"arg1Of","subj":"T3407","obj":"T3406"},{"id":"R2769","pred":"arg3Of","subj":"T3408","obj":"T3405"},{"id":"R2770","pred":"arg1Of","subj":"T3410","obj":"T3411"},{"id":"R2771","pred":"arg2Of","subj":"T3411","obj":"T3409"},{"id":"R2772","pred":"arg2Of","subj":"T3415","obj":"T3411"},{"id":"R2773","pred":"arg1Of","subj":"T3415","obj":"T3412"},{"id":"R2774","pred":"arg1Of","subj":"T3415","obj":"T3413"},{"id":"R2775","pred":"arg1Of","subj":"T3415","obj":"T3414"},{"id":"R2776","pred":"arg1Of","subj":"T3418","obj":"T3417"},{"id":"R2777","pred":"arg1Of","subj":"T3418","obj":"T3419"},{"id":"R2778","pred":"arg1Of","subj":"T3418","obj":"T3423"},{"id":"R2779","pred":"arg1Of","subj":"T3418","obj":"T3429"},{"id":"R2780","pred":"arg2Of","subj":"T3418","obj":"T3430"},{"id":"R2781","pred":"arg1Of","subj":"T3420","obj":"T3421"},{"id":"R2782","pred":"arg2Of","subj":"T3421","obj":"T3419"},{"id":"R2783","pred":"arg2Of","subj":"T3422","obj":"T3421"},{"id":"R2784","pred":"arg2Of","subj":"T3428","obj":"T3423"},{"id":"R2785","pred":"arg1Of","subj":"T3428","obj":"T3424"},{"id":"R2786","pred":"arg2Of","subj":"T3428","obj":"T3425"},{"id":"R2787","pred":"arg1Of","subj":"T3428","obj":"T3426"},{"id":"R2788","pred":"arg1Of","subj":"T3428","obj":"T3427"},{"id":"R2789","pred":"arg1Of","subj":"T3430","obj":"T3409"},{"id":"R2790","pred":"arg1Of","subj":"T3430","obj":"T3416"},{"id":"R2791","pred":"arg2Of","subj":"T3430","obj":"T3429"},{"id":"R2792","pred":"arg1Of","subj":"T3435","obj":"T3430"},{"id":"R2793","pred":"arg2Of","subj":"T3435","obj":"T3431"},{"id":"R2794","pred":"arg1Of","subj":"T3435","obj":"T3432"},{"id":"R2795","pred":"arg2Of","subj":"T3435","obj":"T3433"},{"id":"R2796","pred":"arg1Of","subj":"T3435","obj":"T3434"},{"id":"R2797","pred":"arg1Of","subj":"T3435","obj":"T3436"},{"id":"R2798","pred":"arg2Of","subj":"T3437","obj":"T3436"},{"id":"R2799","pred":"arg3Of","subj":"T3438","obj":"T3436"},{"id":"R2800","pred":"arg1Of","subj":"T3440","obj":"T3439"},{"id":"R2801","pred":"arg1Of","subj":"T3440","obj":"T3441"},{"id":"R2802","pred":"arg1Of","subj":"T3440","obj":"T3443"},{"id":"R2803","pred":"arg2Of","subj":"T3443","obj":"T3441"},{"id":"R2804","pred":"arg1Of","subj":"T3443","obj":"T3442"}],"namespaces":[{"prefix":"_base","uri":"http://kmcs.nii.ac.jp/enju/"}],"text":" to the naive T cells (Figure 2B). Because IL-4 is the key Th2 cytokine, the expression of IL-4 and FOXP3 in freshly isolated CD4+ T cells was analyzed by fluorescence activated cell sorting (FACS). IL-4–expressing cells were most abundant"}
bionlp-st-ge-2016-spacy-parsed
{"project":"bionlp-st-ge-2016-spacy-parsed","denotations":[{"id":"T4102","span":{"begin":1,"end":3},"obj":"TO"},{"id":"T4103","span":{"begin":4,"end":7},"obj":"DT"},{"id":"T4104","span":{"begin":8,"end":13},"obj":"JJ"},{"id":"T4105","span":{"begin":14,"end":15},"obj":"NNP"},{"id":"T4106","span":{"begin":16,"end":21},"obj":"NNS"},{"id":"T4107","span":{"begin":22,"end":23},"obj":"-LRB-"},{"id":"T4108","span":{"begin":23,"end":29},"obj":"NN"},{"id":"T4109","span":{"begin":30,"end":32},"obj":"NN"},{"id":"T4110","span":{"begin":32,"end":33},"obj":"-RRB-"},{"id":"T4111","span":{"begin":33,"end":34},"obj":"."},{"id":"T4112","span":{"begin":35,"end":42},"obj":"IN"},{"id":"T4113","span":{"begin":43,"end":47},"obj":"NN"},{"id":"T4114","span":{"begin":48,"end":50},"obj":"VBZ"},{"id":"T4115","span":{"begin":51,"end":54},"obj":"DT"},{"id":"T4116","span":{"begin":55,"end":58},"obj":"JJ"},{"id":"T4117","span":{"begin":59,"end":62},"obj":"JJ"},{"id":"T4118","span":{"begin":63,"end":71},"obj":"NN"},{"id":"T4119","span":{"begin":71,"end":72},"obj":","},{"id":"T4120","span":{"begin":73,"end":76},"obj":"DT"},{"id":"T4121","span":{"begin":77,"end":87},"obj":"NN"},{"id":"T4122","span":{"begin":88,"end":90},"obj":"IN"},{"id":"T4123","span":{"begin":91,"end":95},"obj":"NN"},{"id":"T4124","span":{"begin":96,"end":99},"obj":"CC"},{"id":"T4125","span":{"begin":100,"end":105},"obj":"CD"},{"id":"T4126","span":{"begin":106,"end":108},"obj":"IN"},{"id":"T4127","span":{"begin":109,"end":116},"obj":"RB"},{"id":"T4128","span":{"begin":117,"end":125},"obj":"VBN"},{"id":"T4129","span":{"begin":126,"end":129},"obj":"NNP"},{"id":"T4130","span":{"begin":129,"end":130},"obj":"CD"},{"id":"T4131","span":{"begin":131,"end":132},"obj":"NNP"},{"id":"T4132","span":{"begin":133,"end":138},"obj":"NNS"},{"id":"T4133","span":{"begin":139,"end":142},"obj":"VBD"},{"id":"T4134","span":{"begin":143,"end":151},"obj":"VBN"},{"id":"T4135","span":{"begin":152,"end":154},"obj":"IN"},{"id":"T4136","span":{"begin":155,"end":167},"obj":"NN"},{"id":"T4137","span":{"begin":168,"end":177},"obj":"VBN"},{"id":"T4138","span":{"begin":178,"end":182},"obj":"NN"},{"id":"T4139","span":{"begin":183,"end":190},"obj":"VBG"},{"id":"T4140","span":{"begin":191,"end":192},"obj":"-LRB-"},{"id":"T4141","span":{"begin":192,"end":196},"obj":"NNP"},{"id":"T4142","span":{"begin":196,"end":197},"obj":"-RRB-"},{"id":"T4143","span":{"begin":197,"end":198},"obj":"."},{"id":"T4144","span":{"begin":199,"end":203},"obj":"NN"},{"id":"T4145","span":{"begin":204,"end":214},"obj":"VBG"},{"id":"T4146","span":{"begin":215,"end":220},"obj":"NNS"},{"id":"T4147","span":{"begin":221,"end":225},"obj":"VBD"},{"id":"T4148","span":{"begin":226,"end":230},"obj":"RBS"},{"id":"T4149","span":{"begin":231,"end":239},"obj":"JJ"}],"relations":[{"id":"R3342","pred":"det","subj":"T4103","obj":"T4106"},{"id":"R3344","pred":"amod","subj":"T4104","obj":"T4106"},{"id":"R3345","pred":"compound","subj":"T4105","obj":"T4106"},{"id":"R3346","pred":"pobj","subj":"T4106","obj":"T4102"},{"id":"R3347","pred":"punct","subj":"T4107","obj":"T4109"},{"id":"R3348","pred":"compound","subj":"T4108","obj":"T4109"},{"id":"R3350","pred":"appos","subj":"T4109","obj":"T4106"},{"id":"R3351","pred":"punct","subj":"T4110","obj":"T4106"},{"id":"R3354","pred":"mark","subj":"T4112","obj":"T4114"},{"id":"R3355","pred":"nsubj","subj":"T4113","obj":"T4114"},{"id":"R3356","pred":"advcl","subj":"T4114","obj":"T4134"},{"id":"R3358","pred":"det","subj":"T4115","obj":"T4118"},{"id":"R3359","pred":"amod","subj":"T4116","obj":"T4118"},{"id":"R3360","pred":"amod","subj":"T4117","obj":"T4118"},{"id":"R3362","pred":"attr","subj":"T4118","obj":"T4114"},{"id":"R3365","pred":"punct","subj":"T4119","obj":"T4118"},{"id":"R3367","pred":"det","subj":"T4120","obj":"T4121"},{"id":"R3368","pred":"nsubjpass","subj":"T4121","obj":"T4134"},{"id":"R3369","pred":"prep","subj":"T4122","obj":"T4121"},{"id":"R3370","pred":"pobj","subj":"T4123","obj":"T4122"},{"id":"R3371","pred":"cc","subj":"T4124","obj":"T4121"},{"id":"R3372","pred":"conj","subj":"T4125","obj":"T4121"},{"id":"R3374","pred":"prep","subj":"T4126","obj":"T4125"},{"id":"R3375","pred":"advmod","subj":"T4127","obj":"T4128"},{"id":"R3376","pred":"amod","subj":"T4128","obj":"T4129"},{"id":"R3378","pred":"compound","subj":"T4129","obj":"T4132"},{"id":"R3379","pred":"nummod","subj":"T4130","obj":"T4132"},{"id":"R3380","pred":"compound","subj":"T4131","obj":"T4132"},{"id":"R3382","pred":"pobj","subj":"T4132","obj":"T4126"},{"id":"R3383","pred":"auxpass","subj":"T4133","obj":"T4134"},{"id":"R3384","pred":"ROOT","subj":"T4134","obj":"T4134"},{"id":"R3386","pred":"agent","subj":"T4135","obj":"T4134"},{"id":"R3387","pred":"amod","subj":"T4136","obj":"T4138"},{"id":"R3388","pred":"amod","subj":"T4137","obj":"T4138"},{"id":"R3390","pred":"pobj","subj":"T4138","obj":"T4135"},{"id":"R3391","pred":"acl","subj":"T4139","obj":"T4138"},{"id":"R3392","pred":"punct","subj":"T4140","obj":"T4139"},{"id":"R3394","pred":"appos","subj":"T4141","obj":"T4139"},{"id":"R3395","pred":"punct","subj":"T4142","obj":"T4134"},{"id":"R3396","pred":"punct","subj":"T4143","obj":"T4134"},{"id":"R3398","pred":"ROOT","subj":"T4144","obj":"T4144"},{"id":"R3399","pred":"amod","subj":"T4145","obj":"T4146"},{"id":"R3400","pred":"nsubj","subj":"T4146","obj":"T4147"},{"id":"R3402","pred":"ROOT","subj":"T4147","obj":"T4147"},{"id":"R3403","pred":"advmod","subj":"T4148","obj":"T4149"},{"id":"R3404","pred":"acomp","subj":"T4149","obj":"T4147"}],"text":" to the naive T cells (Figure 2B). Because IL-4 is the key Th2 cytokine, the expression of IL-4 and FOXP3 in freshly isolated CD4+ T cells was analyzed by fluorescence activated cell sorting (FACS). IL-4–expressing cells were most abundant"}
GO-BP
{"project":"GO-BP","denotations":[{"id":"T2898","span":{"begin":168,"end":182},"obj":"http://purl.obolibrary.org/obo/GO_0001775"}],"text":" to the naive T cells (Figure 2B). Because IL-4 is the key Th2 cytokine, the expression of IL-4 and FOXP3 in freshly isolated CD4+ T cells was analyzed by fluorescence activated cell sorting (FACS). IL-4–expressing cells were most abundant"}
GO-MF
{"project":"GO-MF","denotations":[{"id":"T4447","span":{"begin":43,"end":47},"obj":"http://purl.obolibrary.org/obo/GO_0005136"},{"id":"T4448","span":{"begin":91,"end":95},"obj":"http://purl.obolibrary.org/obo/GO_0005136"},{"id":"T4449","span":{"begin":199,"end":203},"obj":"http://purl.obolibrary.org/obo/GO_0005136"}],"text":" to the naive T cells (Figure 2B). Because IL-4 is the key Th2 cytokine, the expression of IL-4 and FOXP3 in freshly isolated CD4+ T cells was analyzed by fluorescence activated cell sorting (FACS). IL-4–expressing cells were most abundant"}
GO-CC
{"project":"GO-CC","denotations":[{"id":"T4476","span":{"begin":16,"end":21},"obj":"http://purl.obolibrary.org/obo/GO_0005623"},{"id":"T4477","span":{"begin":133,"end":138},"obj":"http://purl.obolibrary.org/obo/GO_0005623"},{"id":"T4478","span":{"begin":215,"end":220},"obj":"http://purl.obolibrary.org/obo/GO_0005623"}],"text":" to the naive T cells (Figure 2B). Because IL-4 is the key Th2 cytokine, the expression of IL-4 and FOXP3 in freshly isolated CD4+ T cells was analyzed by fluorescence activated cell sorting (FACS). IL-4–expressing cells were most abundant"}
sentences
{"project":"sentences","denotations":[{"id":"T2882","span":{"begin":35,"end":198},"obj":"Sentence"},{"id":"T67","span":{"begin":35,"end":198},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":" to the naive T cells (Figure 2B). Because IL-4 is the key Th2 cytokine, the expression of IL-4 and FOXP3 in freshly isolated CD4+ T cells was analyzed by fluorescence activated cell sorting (FACS). IL-4–expressing cells were most abundant"}
events-check-again
{"project":"events-check-again","denotations":[{"id":"T4917","span":{"begin":43,"end":47},"obj":"Protein"},{"id":"T4918","span":{"begin":77,"end":87},"obj":"Gene_expression"},{"id":"T4919","span":{"begin":77,"end":87},"obj":"Gene_expression"},{"id":"T4920","span":{"begin":91,"end":95},"obj":"Protein"},{"id":"T4921","span":{"begin":100,"end":105},"obj":"Protein"},{"id":"T4922","span":{"begin":126,"end":129},"obj":"Protein"},{"id":"T4923","span":{"begin":199,"end":203},"obj":"Protein"},{"id":"T4924","span":{"begin":204,"end":214},"obj":"Gene_expression"}],"relations":[{"id":"R3852","pred":"themeOf","subj":"T4920","obj":"T4918"},{"id":"R3854","pred":"themeOf","subj":"T4921","obj":"T4919"},{"id":"R3855","pred":"themeOf","subj":"T4923","obj":"T4924"}],"attributes":[{"id":"M91","pred":"Speculation","subj":"T4918","obj":"true"},{"id":"M92","pred":"Speculation","subj":"T4919","obj":"true"}],"text":" to the naive T cells (Figure 2B). Because IL-4 is the key Th2 cytokine, the expression of IL-4 and FOXP3 in freshly isolated CD4+ T cells was analyzed by fluorescence activated cell sorting (FACS). IL-4–expressing cells were most abundant"}
bionlp-st-ge-2016-reference
{"project":"bionlp-st-ge-2016-reference","denotations":[{"id":"T2930","span":{"begin":77,"end":87},"obj":"Gene_expression"},{"id":"T2931","span":{"begin":77,"end":87},"obj":"Gene_expression"},{"id":"T2933","span":{"begin":204,"end":214},"obj":"Gene_expression"},{"id":"T2983","span":{"begin":43,"end":47},"obj":"Protein"},{"id":"T2984","span":{"begin":91,"end":95},"obj":"Protein"},{"id":"T2985","span":{"begin":100,"end":105},"obj":"Protein"},{"id":"T2986","span":{"begin":126,"end":129},"obj":"Protein"},{"id":"T2987","span":{"begin":199,"end":203},"obj":"Protein"}],"relations":[{"id":"R2350","pred":"themeOf","subj":"T2984","obj":"T2930"},{"id":"R2351","pred":"themeOf","subj":"T2985","obj":"T2931"},{"id":"R2352","pred":"themeOf","subj":"T2987","obj":"T2933"}],"attributes":[{"id":"M42","pred":"Speculation","subj":"T2930","obj":"true"},{"id":"M43","pred":"Speculation","subj":"T2931","obj":"true"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}],"text":" to the naive T cells (Figure 2B). Because IL-4 is the key Th2 cytokine, the expression of IL-4 and FOXP3 in freshly isolated CD4+ T cells was analyzed by fluorescence activated cell sorting (FACS). IL-4–expressing cells were most abundant"}
bionlp-st-ge-2016-uniprot
{"project":"bionlp-st-ge-2016-uniprot","denotations":[{"id":"T3637","span":{"begin":43,"end":47},"obj":"P05112"},{"id":"T3638","span":{"begin":91,"end":95},"obj":"P05112"},{"id":"T3639","span":{"begin":100,"end":105},"obj":"Q9BZS1"},{"id":"T3640","span":{"begin":126,"end":129},"obj":"P01730"},{"id":"T3641","span":{"begin":199,"end":203},"obj":"P05112"}],"namespaces":[{"prefix":"_base","uri":"http://www.uniprot.org/uniprot/"}],"text":" to the naive T cells (Figure 2B). Because IL-4 is the key Th2 cytokine, the expression of IL-4 and FOXP3 in freshly isolated CD4+ T cells was analyzed by fluorescence activated cell sorting (FACS). IL-4–expressing cells were most abundant"}
test2
{"project":"test2","denotations":[{"id":"T2826","span":{"begin":43,"end":47},"obj":"Protein"},{"id":"T2827","span":{"begin":77,"end":87},"obj":"Gene_expression"},{"id":"T2828","span":{"begin":91,"end":95},"obj":"Protein"},{"id":"T2829","span":{"begin":100,"end":105},"obj":"Protein"},{"id":"T2830","span":{"begin":126,"end":129},"obj":"Protein"},{"id":"T2831","span":{"begin":199,"end":203},"obj":"Protein"},{"id":"T2832","span":{"begin":204,"end":214},"obj":"Gene_expression"}],"relations":[{"id":"R2300","pred":"themeOf","subj":"T2828","obj":"T2827"},{"id":"R2301","pred":"themeOf","subj":"T2829","obj":"T2827"},{"id":"R2302","pred":"themeOf","subj":"T2831","obj":"T2832"}],"text":" to the naive T cells (Figure 2B). Because IL-4 is the key Th2 cytokine, the expression of IL-4 and FOXP3 in freshly isolated CD4+ T cells was analyzed by fluorescence activated cell sorting (FACS). IL-4–expressing cells were most abundant"}