PMC:2222968 / 8787-8980 JSONTXT

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    pmc-enju-pas

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    bionlp-st-ge-2016-spacy-parsed

    {"project":"bionlp-st-ge-2016-spacy-parsed","denotations":[{"id":"T4051","span":{"begin":0,"end":9},"obj":"RB"},{"id":"T4052","span":{"begin":10,"end":19},"obj":"VBG"},{"id":"T4053","span":{"begin":20,"end":23},"obj":"JJ"},{"id":"T4054","span":{"begin":24,"end":29},"obj":"NNS"},{"id":"T4055","span":{"begin":30,"end":34},"obj":"JJ"},{"id":"T4056","span":{"begin":35,"end":37},"obj":"IN"},{"id":"T4057","span":{"begin":38,"end":43},"obj":"NNP"},{"id":"T4058","span":{"begin":43,"end":44},"obj":"NNP"},{"id":"T4059","span":{"begin":45,"end":46},"obj":"NNP"},{"id":"T4060","span":{"begin":47,"end":52},"obj":"NNS"},{"id":"T4061","span":{"begin":52,"end":53},"obj":","},{"id":"T4062","span":{"begin":54,"end":55},"obj":"NNP"},{"id":"T4063","span":{"begin":56,"end":61},"obj":"NNS"},{"id":"T4064","span":{"begin":62,"end":70},"obj":"VBD"},{"id":"T4065","span":{"begin":71,"end":80},"obj":"VBG"},{"id":"T4066","span":{"begin":81,"end":83},"obj":"TO"},{"id":"T4067","span":{"begin":84,"end":89},"obj":"PRP$"},{"id":"T4068","span":{"begin":90,"end":94},"obj":"NN"},{"id":"T4069","span":{"begin":95,"end":104},"obj":"NN"},{"id":"T4070","span":{"begin":104,"end":105},"obj":","},{"id":"T4071","span":{"begin":106,"end":108},"obj":"CC"},{"id":"T4072","span":{"begin":109,"end":111},"obj":"DT"},{"id":"T4073","span":{"begin":112,"end":116},"obj":"NN"},{"id":"T4074","span":{"begin":117,"end":126},"obj":"VBG"},{"id":"T4075","span":{"begin":127,"end":128},"obj":"NNP"},{"id":"T4076","span":{"begin":129,"end":133},"obj":"NN"},{"id":"T4077","span":{"begin":134,"end":139},"obj":"NN"},{"id":"T4078","span":{"begin":140,"end":141},"obj":"-LRB-"},{"id":"T4079","span":{"begin":141,"end":144},"obj":"CD"},{"id":"T4080","span":{"begin":144,"end":145},"obj":"-RRB-"},{"id":"T4081","span":{"begin":146,"end":150},"obj":"VBD"},{"id":"T4082","span":{"begin":151,"end":155},"obj":"RB"},{"id":"T4083","span":{"begin":156,"end":163},"obj":"VBG"},{"id":"T4084","span":{"begin":164,"end":169},"obj":"CD"},{"id":"T4085","span":{"begin":170,"end":180},"obj":"NN"},{"id":"T4086","span":{"begin":181,"end":182},"obj":"-LRB-"},{"id":"T4087","span":{"begin":182,"end":188},"obj":"NN"},{"id":"T4088","span":{"begin":189,"end":191},"obj":"NN"},{"id":"T4089","span":{"begin":191,"end":192},"obj":"-RRB-"},{"id":"T4090","span":{"begin":192,"end":193},"obj":"."}],"relations":[{"id":"R3268","pred":"advmod","subj":"T4051","obj":"T4052"},{"id":"R3269","pred":"advcl","subj":"T4052","obj":"T4064"},{"id":"R3270","pred":"amod","subj":"T4053","obj":"T4054"},{"id":"R3272","pred":"dobj","subj":"T4054","obj":"T4052"},{"id":"R3273","pred":"amod","subj":"T4055","obj":"T4056"},{"id":"R3274","pred":"prep","subj":"T4056","obj":"T4054"},{"id":"R3276","pred":"compound","subj":"T4057","obj":"T4060"},{"id":"R3277","pred":"compound","subj":"T4058","obj":"T4060"},{"id":"R3278","pred":"compound","subj":"T4059","obj":"T4060"},{"id":"R3280","pred":"pobj","subj":"T4060","obj":"T4056"},{"id":"R3282","pred":"punct","subj":"T4061","obj":"T4064"},{"id":"R3283","pred":"compound","subj":"T4062","obj":"T4063"},{"id":"R3284","pred":"nsubj","subj":"T4063","obj":"T4064"},{"id":"R3285","pred":"ROOT","subj":"T4064","obj":"T4064"},{"id":"R3287","pred":"prep","subj":"T4065","obj":"T4064"},{"id":"R3288","pred":"prep","subj":"T4066","obj":"T4065"},{"id":"R3289","pred":"poss","subj":"T4067","obj":"T4069"},{"id":"R3293","pred":"compound","subj":"T4068","obj":"T4069"},{"id":"R3295","pred":"pobj","subj":"T4069","obj":"T4066"},{"id":"R3297","pred":"punct","subj":"T4070","obj":"T4069"},{"id":"R3298","pred":"cc","subj":"T4071","obj":"T4069"},{"id":"R3299","pred":"det","subj":"T4072","obj":"T4073"},{"id":"R3301","pred":"conj","subj":"T4073","obj":"T4069"},{"id":"R3302","pred":"conj","subj":"T4074","obj":"T4065"},{"id":"R3303","pred":"compound","subj":"T4075","obj":"T4077"},{"id":"R3305","pred":"compound","subj":"T4076","obj":"T4077"},{"id":"R3306","pred":"dobj","subj":"T4077","obj":"T4074"},{"id":"R3307","pred":"punct","subj":"T4078","obj":"T4077"},{"id":"R3309","pred":"appos","subj":"T4079","obj":"T4077"},{"id":"R3310","pred":"punct","subj":"T4080","obj":"T4077"},{"id":"R3311","pred":"aux","subj":"T4081","obj":"T4083"},{"id":"R3313","pred":"advmod","subj":"T4082","obj":"T4083"},{"id":"R3314","pred":"ccomp","subj":"T4083","obj":"T4064"},{"id":"R3315","pred":"nummod","subj":"T4084","obj":"T4085"},{"id":"R3316","pred":"dobj","subj":"T4085","obj":"T4083"},{"id":"R3317","pred":"punct","subj":"T4086","obj":"T4088"},{"id":"R3318","pred":"compound","subj":"T4087","obj":"T4088"},{"id":"R3319","pred":"appos","subj":"T4088","obj":"T4085"},{"id":"R3321","pred":"punct","subj":"T4089","obj":"T4064"},{"id":"R3322","pred":"punct","subj":"T4090","obj":"T4064"}],"text":"Naturally occurring Th2 cells such as CRTH2+ T cells, T cells isolated according to their IL-4 secretion, or an IL-4–producing T cell clone (BR8) were also lacking FOXP3 expression (Figure 2B)."}

    GO-BP

    {"project":"GO-BP","denotations":[{"id":"T2894","span":{"begin":90,"end":104},"obj":"http://purl.obolibrary.org/obo/GO_0072602"},{"id":"T2896","span":{"begin":95,"end":104},"obj":"http://purl.obolibrary.org/obo/GO_0046903"}],"text":"Naturally occurring Th2 cells such as CRTH2+ T cells, T cells isolated according to their IL-4 secretion, or an IL-4–producing T cell clone (BR8) were also lacking FOXP3 expression (Figure 2B)."}

    GO-MF

    {"project":"GO-MF","denotations":[{"id":"T4445","span":{"begin":90,"end":94},"obj":"http://purl.obolibrary.org/obo/GO_0005136"},{"id":"T4446","span":{"begin":112,"end":116},"obj":"http://purl.obolibrary.org/obo/GO_0005136"}],"text":"Naturally occurring Th2 cells such as CRTH2+ T cells, T cells isolated according to their IL-4 secretion, or an IL-4–producing T cell clone (BR8) were also lacking FOXP3 expression (Figure 2B)."}

    GO-CC

    {"project":"GO-CC","denotations":[{"id":"T4472","span":{"begin":24,"end":29},"obj":"http://purl.obolibrary.org/obo/GO_0005623"},{"id":"T4473","span":{"begin":47,"end":52},"obj":"http://purl.obolibrary.org/obo/GO_0005623"},{"id":"T4474","span":{"begin":56,"end":61},"obj":"http://purl.obolibrary.org/obo/GO_0005623"}],"text":"Naturally occurring Th2 cells such as CRTH2+ T cells, T cells isolated according to their IL-4 secretion, or an IL-4–producing T cell clone (BR8) were also lacking FOXP3 expression (Figure 2B)."}

    sentences

    {"project":"sentences","denotations":[{"id":"T2880","span":{"begin":0,"end":193},"obj":"Sentence"},{"id":"T65","span":{"begin":0,"end":193},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"Naturally occurring Th2 cells such as CRTH2+ T cells, T cells isolated according to their IL-4 secretion, or an IL-4–producing T cell clone (BR8) were also lacking FOXP3 expression (Figure 2B)."}

    events-check-again

    {"project":"events-check-again","denotations":[{"id":"T4905","span":{"begin":38,"end":43},"obj":"Protein"},{"id":"T4906","span":{"begin":90,"end":94},"obj":"Protein"},{"id":"T4907","span":{"begin":95,"end":104},"obj":"Gene_expression"},{"id":"T4908","span":{"begin":112,"end":116},"obj":"Protein"},{"id":"T4909","span":{"begin":117,"end":126},"obj":"Gene_expression"},{"id":"T4910","span":{"begin":156,"end":163},"obj":"Negative_regulation"},{"id":"T4911","span":{"begin":164,"end":169},"obj":"Protein"},{"id":"T4912","span":{"begin":170,"end":180},"obj":"Gene_expression"}],"relations":[{"id":"R3842","pred":"themeOf","subj":"T4906","obj":"T4907"},{"id":"R3843","pred":"themeOf","subj":"T4908","obj":"T4909"},{"id":"R3845","pred":"themeOf","subj":"T4911","obj":"T4912"},{"id":"R3846","pred":"themeOf","subj":"T4912","obj":"T4910"}],"text":"Naturally occurring Th2 cells such as CRTH2+ T cells, T cells isolated according to their IL-4 secretion, or an IL-4–producing T cell clone (BR8) were also lacking FOXP3 expression (Figure 2B)."}

    bionlp-st-ge-2016-reference

    {"project":"bionlp-st-ge-2016-reference","denotations":[{"id":"T2924","span":{"begin":95,"end":104},"obj":"Gene_expression"},{"id":"T2925","span":{"begin":117,"end":126},"obj":"Gene_expression"},{"id":"T2926","span":{"begin":156,"end":163},"obj":"Negative_regulation"},{"id":"T2927","span":{"begin":170,"end":180},"obj":"Gene_expression"},{"id":"T2977","span":{"begin":38,"end":43},"obj":"Protein"},{"id":"T2978","span":{"begin":90,"end":94},"obj":"Protein"},{"id":"T2979","span":{"begin":112,"end":116},"obj":"Protein"},{"id":"T2981","span":{"begin":164,"end":169},"obj":"Protein"}],"relations":[{"id":"R2322","pred":"themeOf","subj":"T2927","obj":"T2926"},{"id":"R2345","pred":"themeOf","subj":"T2978","obj":"T2924"},{"id":"R2346","pred":"themeOf","subj":"T2979","obj":"T2925"},{"id":"R2348","pred":"themeOf","subj":"T2981","obj":"T2927"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}],"text":"Naturally occurring Th2 cells such as CRTH2+ T cells, T cells isolated according to their IL-4 secretion, or an IL-4–producing T cell clone (BR8) were also lacking FOXP3 expression (Figure 2B)."}

    bionlp-st-ge-2016-uniprot

    {"project":"bionlp-st-ge-2016-uniprot","denotations":[{"id":"T3632","span":{"begin":90,"end":94},"obj":"P05112"},{"id":"T3633","span":{"begin":112,"end":116},"obj":"P05112"},{"id":"T3634","span":{"begin":164,"end":169},"obj":"Q9BZS1"}],"namespaces":[{"prefix":"_base","uri":"http://www.uniprot.org/uniprot/"}],"text":"Naturally occurring Th2 cells such as CRTH2+ T cells, T cells isolated according to their IL-4 secretion, or an IL-4–producing T cell clone (BR8) were also lacking FOXP3 expression (Figure 2B)."}

    test2

    {"project":"test2","denotations":[{"id":"T2813","span":{"begin":38,"end":43},"obj":"Protein"},{"id":"T2814","span":{"begin":90,"end":94},"obj":"Protein"},{"id":"T2815","span":{"begin":95,"end":104},"obj":"Gene_expression"},{"id":"T2816","span":{"begin":112,"end":116},"obj":"Protein"},{"id":"T2817","span":{"begin":117,"end":126},"obj":"Gene_expression"},{"id":"T2818","span":{"begin":156,"end":163},"obj":"Negative_regulation"},{"id":"T2819","span":{"begin":164,"end":169},"obj":"Protein"},{"id":"T2820","span":{"begin":170,"end":180},"obj":"Gene_expression"}],"relations":[{"id":"R2290","pred":"themeOf","subj":"T2814","obj":"T2815"},{"id":"R2291","pred":"themeOf","subj":"T2816","obj":"T2817"},{"id":"R2292","pred":"themeOf","subj":"T2819","obj":"T2820"},{"id":"R2293","pred":"themeOf","subj":"T2820","obj":"T2818"}],"text":"Naturally occurring Th2 cells such as CRTH2+ T cells, T cells isolated according to their IL-4 secretion, or an IL-4–producing T cell clone (BR8) were also lacking FOXP3 expression (Figure 2B)."}