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PMC:2222968 / 778-1024 JSONTXT

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pmc-enju-pas

Id Subject Object Predicate Lexical cue
T225 5-9 DT denotes This
T226 10-20 JJ denotes inhibitory
T227 21-30 NN denotes mechanism
T228 31-34 VB denotes was
T229 35-39 RB denotes also
T230 40-49 VB denotes confirmed
T231 50-52 IN denotes in
T232 53-56 NN denotes Th2
T233 57-62 NN denotes cells
T234 63-66 CC denotes and
T235 67-69 IN denotes in
T236 70-71 NN denotes T
T237 72-77 NN denotes cells
T238 78-80 IN denotes of
T239 81-91 JJ denotes transgenic
T240 92-96 NN denotes mice
T241 97-111 VB denotes overexpressing
T242 112-118 NN denotes GATA-3
T243 119-121 IN denotes in
T244 122-123 NN denotes T
T245 124-129 NN denotes cells
T246 129-130 -COMMA- denotes ,
T247 131-136 WDT denotes which
T248 137-140 VB denotes are
T249 141-146 VB denotes shown
T250 147-149 TO denotes to
T251 150-152 VB denotes be
T252 153-162 JJ denotes deficient
T253 163-165 IN denotes in
T254 166-178 VB denotes transforming
T255 179-185 NN denotes growth
T256 186-192 NN denotes factor
T257 193-194 -LRB- denotes (
T258 194-197 NN denotes TGF
T259 197-198 -RRB- denotes )
T260 198-209 JJ denotes -β–mediated
T261 210-215 NN denotes FOXP3
T262 216-225 NN denotes induction
T263 227-231 DT denotes This
T264 232-242 NN denotes inhibition
T265 243-245 VB denotes is
R167 T227 T225 arg1Of mechanism,This
R168 T227 T226 arg1Of mechanism,inhibitory
R169 T227 T228 arg1Of mechanism,was
R170 T227 T230 arg2Of mechanism,confirmed
R171 T230 T228 arg2Of confirmed,was
R172 T230 T229 arg1Of confirmed,also
R173 T230 T231 arg1Of confirmed,in
R174 T230 T235 arg1Of confirmed,in
R175 T231 T234 arg1Of in,and
R176 T233 T231 arg2Of cells,in
R177 T233 T232 arg1Of cells,Th2
R178 T235 T234 arg2Of in,and
R179 T237 T235 arg2Of cells,in
R180 T237 T236 arg1Of cells,T
R181 T237 T238 arg1Of cells,of
R182 T240 T238 arg2Of mice,of
R183 T240 T239 arg1Of mice,transgenic
R184 T240 T241 arg1Of mice,overexpressing
R185 T240 T246 arg1Of mice,","
R186 T240 T247 arg1Of mice,which
R187 T240 T248 arg1Of mice,are
R188 T240 T249 arg2Of mice,shown
R189 T240 T251 arg1Of mice,be
R190 T240 T252 arg1Of mice,deficient
R191 T241 T243 arg1Of overexpressing,in
R192 T242 T241 arg2Of GATA-3,overexpressing
R193 T245 T243 arg2Of cells,in
R194 T245 T244 arg1Of cells,T
R195 T249 T248 arg2Of shown,are
R196 T251 T249 arg3Of be,shown
R197 T251 T250 arg1Of be,to
R198 T252 T251 arg2Of deficient,be
R199 T252 T253 arg1Of deficient,in
R200 T254 T253 arg2Of transforming,in
R201 T258 T257 arg2Of TGF,(
R202 T259 T257 arg3Of ),(
R203 T262 T254 arg2Of induction,transforming
R204 T262 T255 arg1Of induction,growth
R205 T262 T256 arg1Of induction,factor
R206 T262 T257 arg1Of induction,(
R207 T262 T260 arg1Of induction,-β–mediated
R208 T262 T261 arg1Of induction,FOXP3
R209 T264 T263 arg1Of inhibition,This
R210 T264 T265 arg1Of inhibition,is

bionlp-st-ge-2016-coref

Id Subject Object Predicate Lexical cue
T337 227-242 Anaphor denotes This inhibition
T338 153-162 Antecedent denotes deficient
R635 T337 T338 boundBy This inhibition,deficient

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T483 3-4 . denotes .
T484 5-9 DT denotes This
T485 10-20 JJ denotes inhibitory
T486 21-30 NN denotes mechanism
T487 31-34 VBD denotes was
T488 35-39 RB denotes also
T489 40-49 VBN denotes confirmed
T490 50-52 IN denotes in
T491 53-56 JJ denotes Th2
T492 57-62 NNS denotes cells
T493 63-66 CC denotes and
T494 67-69 IN denotes in
T495 70-71 NNP denotes T
T496 72-77 NNS denotes cells
T497 78-80 IN denotes of
T498 81-91 JJ denotes transgenic
T499 92-96 NNS denotes mice
T500 97-111 VBG denotes overexpressing
T501 112-118 NN denotes GATA-3
T502 119-121 IN denotes in
T503 122-123 NNP denotes T
T504 124-129 NNS denotes cells
T505 129-130 , denotes ,
T506 131-136 WDT denotes which
T507 137-140 VBP denotes are
T508 141-146 VBN denotes shown
T509 147-149 TO denotes to
T510 150-152 VB denotes be
T511 153-162 JJ denotes deficient
T512 163-165 IN denotes in
T513 166-178 VBG denotes transforming
T514 179-185 NN denotes growth
T515 186-192 NN denotes factor
T516 193-194 -LRB- denotes (
T517 194-197 NNP denotes TGF
T518 197-198 -RRB- denotes )
T519 198-199 : denotes -
T520 199-200 NN denotes β
T521 201-209 VBD denotes mediated
T522 210-215 CD denotes FOXP3
T523 216-225 NN denotes induction
T524 225-226 . denotes .
T525 227-231 DT denotes This
T526 232-242 NN denotes inhibition
T527 243-245 VBZ denotes is
R404 T484 T486 det This,mechanism
R405 T485 T486 amod inhibitory,mechanism
R406 T486 T489 nsubjpass mechanism,confirmed
R407 T487 T489 auxpass was,confirmed
R408 T488 T489 advmod also,confirmed
R409 T489 T489 ROOT confirmed,confirmed
R410 T490 T489 prep in,confirmed
R411 T491 T492 amod Th2,cells
R412 T492 T490 pobj cells,in
R413 T493 T490 cc and,in
R414 T494 T490 conj in,in
R415 T495 T496 compound T,cells
R416 T496 T494 pobj cells,in
R417 T497 T496 prep of,cells
R418 T498 T499 amod transgenic,mice
R419 T499 T497 pobj mice,of
R420 T500 T489 advcl overexpressing,confirmed
R421 T501 T500 dobj GATA-3,overexpressing
R422 T502 T500 prep in,overexpressing
R423 T503 T504 compound T,cells
R424 T504 T502 pobj cells,in
R425 T505 T489 punct ",",confirmed
R426 T506 T508 nsubjpass which,shown
R427 T507 T508 auxpass are,shown
R428 T508 T489 advcl shown,confirmed
R429 T509 T510 aux to,be
R430 T510 T508 xcomp be,shown
R431 T511 T510 acomp deficient,be
R432 T512 T511 prep in,deficient
R433 T513 T512 pcomp transforming,in
R434 T514 T515 compound growth,factor
R435 T515 T513 dobj factor,transforming
R436 T516 T517 punct (,TGF
R437 T517 T515 appos TGF,factor
R438 T518 T517 punct ),TGF
R439 T519 T515 punct -,factor
R440 T520 T515 appos β,factor
R441 T521 T489 conj mediated,confirmed
R442 T522 T523 nummod FOXP3,induction
R443 T523 T521 dobj induction,mediated
R444 T524 T489 punct .,confirmed
R445 T525 T526 det This,inhibition

GO-BP

Id Subject Object Predicate Lexical cue
T70 179-185 http://purl.obolibrary.org/obo/GO_0040007 denotes growth

GO-CC

Id Subject Object Predicate Lexical cue
T636 57-62 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T637 72-77 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T638 124-129 http://purl.obolibrary.org/obo/GO_0005623 denotes cells

sentences

Id Subject Object Predicate Lexical cue
T63 5-226 Sentence denotes This inhibitory mechanism was also confirmed in Th2 cells and in T cells of transgenic mice overexpressing GATA-3 in T cells, which are shown to be deficient in transforming growth factor (TGF)-β–mediated FOXP3 induction.
T7 5-226 Sentence denotes This inhibitory mechanism was also confirmed in Th2 cells and in T cells of transgenic mice overexpressing GATA-3 in T cells, which are shown to be deficient in transforming growth factor (TGF)-β–mediated FOXP3 induction.

events-check-again

Id Subject Object Predicate Lexical cue
T768 166-200 Protein denotes transforming growth factor (TGF)-β
T769 201-209 Positive_regulation denotes mediated
T770 210-215 Protein denotes FOXP3
T771 216-225 Positive_regulation denotes induction
T765 97-111 Gene_expression denotes overexpressing
T766 112-118 Protein denotes GATA-3
T767 153-162 Negative_regulation denotes deficient
R599 T768 T769 causeOf transforming growth factor (TGF)-β,mediated
R600 T769 T767 themeOf mediated,deficient
R601 T770 T771 themeOf FOXP3,induction
R602 T771 T769 themeOf induction,mediated
R662 T766 T765 themeOf GATA-3,overexpressing

bionlp-st-ge-2016-reference-tees

Id Subject Object Predicate Lexical cue
T657 112-118 Protein denotes GATA-3
T658 210-215 Protein denotes FOXP3
T659 97-111 Gene_expression denotes overexpressing
T660 216-225 Positive_regulation denotes induction
T661 153-162 Negative_regulation denotes deficient
R551 T657 T659 themeOf GATA-3,overexpressing
R552 T658 T660 themeOf FOXP3,induction
R553 T660 T661 themeOf induction,deficient

bionlp-st-ge-2016-reference

Id Subject Object Predicate Lexical cue
T105 112-118 Protein denotes GATA-3
T106 166-200 Protein denotes transforming growth factor (TGF)-β
T78 216-225 Positive_regulation denotes induction
T88 97-111 Gene_expression denotes overexpressing
T89 153-162 Negative_regulation denotes deficient
T90 201-209 Positive_regulation denotes mediated
T92 210-215 Protein denotes FOXP3
R624 T90 T89 themeOf mediated,deficient
R625 T92 T78 themeOf FOXP3,induction
R42 T105 T88 themeOf GATA-3,overexpressing
R43 T106 T90 causeOf transforming growth factor (TGF)-β,mediated
R618 T78 T90 themeOf induction,mediated

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T345 112-118 P23771 denotes GATA-3
T346 210-215 Q9BZS1 denotes FOXP3

test2

Id Subject Object Predicate Lexical cue
T42 97-111 Gene_expression denotes overexpressing
T43 112-118 Protein denotes GATA-3
T44 153-162 Negative_regulation denotes deficient
T45 166-200 Protein denotes transforming growth factor (TGF)-β
T46 201-209 Positive_regulation denotes mediated
T47 210-215 Protein denotes FOXP3
T48 216-225 Positive_regulation denotes induction
R30 T43 T42 themeOf GATA-3,overexpressing
R31 T47 T48 themeOf FOXP3,induction
R32 T48 T46 themeOf induction,mediated