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PMC:2222968 / 6919-7074 JSONTXT

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pmc-enju-pas

Id Subject Object Predicate Lexical cue
T3138 0-3 DT denotes The
T3139 4-13 NN denotes CD4+CD25–
T3140 13-14 -COMMA- denotes ,
T3141 15-22 JJ denotes CD45RA+
T3142 22-23 -COMMA- denotes ,
T3143 24-31 JJ denotes CD45RO+
T3144 31-32 -COMMA- denotes ,
T3145 33-36 CC denotes and
T3146 37-53 NN denotes CD4+CD45RO+CD25–
T3147 54-58 VB denotes were
T3148 59-63 JJ denotes able
T3149 64-66 TO denotes to
T3150 67-80 RB denotes significantly
T3151 81-87 VB denotes induce
T3152 88-93 NN denotes FOXP3
T3153 94-98 NN denotes mRNA
T3154 99-101 IN denotes up
T3155 102-104 TO denotes to
T3156 105-112 RB denotes 30-fold
T3157 113-117 IN denotes upon
T3158 118-121 NN denotes TCR
T3159 122-132 NN denotes activation
T3160 133-136 CC denotes and
T3161 137-145 NN denotes addition
T3162 146-148 IN denotes of
T3163 149-154 NN denotes TGF-β
R2496 T3139 T3138 arg1Of CD4+CD25–,The
R2497 T3139 T3140 arg1Of CD4+CD25–,","
R2498 T3139 T3142 arg1Of CD4+CD25–,","
R2499 T3141 T3140 arg2Of CD45RA+,","
R2500 T3142 T3145 arg1Of ",",and
R2501 T3143 T3142 arg2Of CD45RO+,","
R2502 T3145 T3144 arg1Of and,","
R2503 T3145 T3147 arg1Of and,were
R2504 T3145 T3148 arg1Of and,able
R2505 T3145 T3151 arg1Of and,induce
R2506 T3146 T3145 arg2Of CD4+CD45RO+CD25–,and
R2507 T3148 T3147 arg2Of able,were
R2508 T3151 T3148 arg2Of induce,able
R2509 T3151 T3149 arg1Of induce,to
R2510 T3151 T3150 arg1Of induce,significantly
R2511 T3151 T3157 arg1Of induce,upon
R2512 T3153 T3151 arg2Of mRNA,induce
R2513 T3153 T3152 arg1Of mRNA,FOXP3
R2514 T3154 T3155 arg1Of up,to
R2515 T3157 T3154 arg1Of upon,up
R2516 T3157 T3156 arg1Of upon,30-fold
R2517 T3159 T3158 arg1Of activation,TCR
R2518 T3159 T3160 arg1Of activation,and
R2519 T3160 T3157 arg2Of and,upon
R2520 T3161 T3160 arg2Of addition,and
R2521 T3161 T3162 arg1Of addition,of
R2522 T3163 T3162 arg2Of TGF-β,of

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T3817 0-3 DT denotes The
T3818 4-7 NNP denotes CD4
T3819 7-8 NNP denotes +
T3820 8-12 NNP denotes CD25
T3821 13-14 , denotes ,
T3822 15-21 NNP denotes CD45RA
T3823 21-22 NNP denotes +
T3824 22-23 , denotes ,
T3825 24-30 NNP denotes CD45RO
T3826 30-31 NNP denotes +
T3827 31-32 , denotes ,
T3828 33-36 CC denotes and
T3829 37-40 NNP denotes CD4
T3830 40-41 NNP denotes +
T3831 41-47 NNP denotes CD45RO
T3832 47-48 NNP denotes +
T3833 48-52 NNP denotes CD25
T3834 54-58 VBD denotes were
T3835 59-63 JJ denotes able
T3836 64-66 TO denotes to
T3837 67-80 RB denotes significantly
T3838 81-87 VB denotes induce
T3839 88-93 CD denotes FOXP3
T3840 94-98 NNP denotes mRNA
T3841 99-101 IN denotes up
T3842 102-104 TO denotes to
T3843 105-112 JJ denotes 30-fold
T3844 113-117 IN denotes upon
T3845 118-121 NNP denotes TCR
T3846 122-132 NN denotes activation
T3847 133-136 CC denotes and
T3848 137-145 NN denotes addition
T3849 146-148 IN denotes of
T3850 149-154 NNP denotes TGF-β
T3851 154-155 . denotes .
R3089 T3817 T3820 det The,CD25
R3090 T3818 T3820 compound CD4,CD25
R3091 T3819 T3820 compound +,CD25
R3092 T3820 T3834 nsubj CD25,were
R3093 T3821 T3820 punct ",",CD25
R3094 T3822 T3823 compound CD45RA,+
R3095 T3823 T3820 appos +,CD25
R3096 T3824 T3823 punct ",",+
R3097 T3825 T3826 compound CD45RO,+
R3098 T3826 T3820 appos +,CD25
R3099 T3827 T3826 punct ",",+
R3100 T3828 T3826 cc and,+
R3101 T3829 T3833 compound CD4,CD25
R3102 T3830 T3833 compound +,CD25
R3103 T3831 T3833 compound CD45RO,CD25
R3104 T3832 T3833 compound +,CD25
R3105 T3833 T3826 conj CD25,+
R3106 T3834 T3834 ROOT were,were
R3107 T3835 T3834 acomp able,were
R3108 T3836 T3838 aux to,induce
R3109 T3837 T3838 advmod significantly,induce
R3110 T3838 T3835 xcomp induce,able
R3111 T3839 T3840 nummod FOXP3,mRNA
R3112 T3840 T3838 dobj mRNA,induce
R3113 T3841 T3838 cc up,induce
R3114 T3842 T3843 aux to,30-fold
R3115 T3843 T3838 xcomp 30-fold,induce
R3116 T3844 T3843 prep upon,30-fold
R3117 T3845 T3846 compound TCR,activation
R3118 T3846 T3844 pobj activation,upon
R3119 T3847 T3846 cc and,activation
R3120 T3848 T3846 conj addition,activation
R3121 T3849 T3848 prep of,addition
R3122 T3850 T3849 pobj TGF-β,of
R3123 T3851 T3834 punct .,were

GO-BP

Id Subject Object Predicate Lexical cue
T2892 118-121 http://purl.obolibrary.org/obo/GO_0006283 denotes TCR

GO-CC

Id Subject Object Predicate Lexical cue
T4490 118-121 http://purl.obolibrary.org/obo/GO_0042101 denotes TCR

sentences

Id Subject Object Predicate Lexical cue
T2869 0-155 Sentence denotes The CD4+CD25–, CD45RA+, CD45RO+, and CD4+CD45RO+CD25– were able to significantly induce FOXP3 mRNA up to 30-fold upon TCR activation and addition of TGF-β.
T47 0-155 Sentence denotes The CD4+CD25–, CD45RA+, CD45RO+, and CD4+CD45RO+CD25– were able to significantly induce FOXP3 mRNA up to 30-fold upon TCR activation and addition of TGF-β.

events-check-again

Id Subject Object Predicate Lexical cue
T4856 4-7 Protein denotes CD4
T4857 8-12 Protein denotes CD25
T4858 15-21 Protein denotes CD45RA
T4859 24-30 Protein denotes CD45RO
T4860 37-40 Protein denotes CD4
T4861 41-47 Protein denotes CD45RO
T4862 48-52 Protein denotes CD25
T4863 81-87 Positive_regulation denotes induce
T4864 88-93 Protein denotes FOXP3
T4865 149-154 Protein denotes TGF-β
R3833 T4864 T4863 themeOf FOXP3,induce
R3844 T4865 T4863 causeOf TGF-β,induce

bionlp-st-ge-2016-reference

Id Subject Object Predicate Lexical cue
T2946 81-87 Positive_regulation denotes induce
T2949 4-7 Protein denotes CD4
T2950 8-12 Protein denotes CD25
T2951 15-21 Protein denotes CD45RA
T2952 24-30 Protein denotes CD45RO
T2953 37-40 Protein denotes CD4
T2954 41-47 Protein denotes CD45RO
T2955 48-52 Protein denotes CD25
T2956 88-93 Protein denotes FOXP3
T2957 149-154 Protein denotes TGF-β
R2326 T2956 T2946 themeOf FOXP3,induce
R2327 T2957 T2946 causeOf TGF-β,induce

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T3605 4-7 P01730 denotes CD4
T3606 8-12 P01589 denotes CD25
T3607 15-21 P08575 denotes CD45RA
T3608 24-30 P08575 denotes CD45RO
T3609 37-40 P01730 denotes CD4
T3610 41-47 P08575 denotes CD45RO
T3611 48-52 P01589 denotes CD25
T3612 59-63 P00519 denotes able
T3613 88-93 Q9BZS1 denotes FOXP3
T3614 149-154 P01137 denotes TGF-β

test2

Id Subject Object Predicate Lexical cue Negation
T2761 4-7 Protein denotes CD4
T2762 8-12 Protein denotes CD25
T2763 15-21 Protein denotes CD45RA
T2764 24-30 Protein denotes CD45RO
T2765 37-40 Protein denotes CD4
T2766 41-47 Protein denotes CD45RO
T2767 48-52 Protein denotes CD25
T2768 81-87 Positive_regulation denotes induce
T2769 88-93 Protein denotes FOXP3 true
T2770 99-104 Positive_regulation denotes up to
T2771 149-154 Protein denotes TGF-β true
R2261 T2769 T2768 themeOf FOXP3,induce
R2262 T2770 T2768 themeOf up to,induce
R2263 T2771 T2770 causeOf TGF-β,up to