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PMC:2222968 / 5118-5355 JSONTXT

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2_test

Id Subject Object Predicate Lexical cue
18162042-15753318-84705008 165-167 15753318 denotes 11
18162042-14597769-84705009 168-170 14597769 denotes 12
18162042-17185041-84705010 230-232 17185041 denotes 13
18162042-17154262-84705011 233-235 17154262 denotes 14
T25969 165-167 15753318 denotes 11
T96747 168-170 14597769 denotes 12
T99026 230-232 17185041 denotes 13
T47692 233-235 17154262 denotes 14

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T1382 0-3 DT denotes The
T1383 4-9 JJ denotes exact
T1384 10-20 NN denotes mechanisms
T1385 21-23 IN denotes of
T1386 24-29 NN denotes iTreg
T1387 30-40 NN denotes generation
T1388 41-44 VB denotes are
T1389 45-52 JJ denotes unclear
T1390 52-53 -COMMA- denotes ,
T1391 54-57 CC denotes but
T1392 58-59 NN denotes T
T1393 60-64 NN denotes cell
T1394 65-73 NN denotes receptor
T1395 74-75 -LRB- denotes (
T1396 75-78 NN denotes TCR
T1397 78-79 -RRB- denotes )
T1398 80-90 NN denotes triggering
T1399 91-94 VB denotes has
T1400 95-99 VB denotes been
T1401 100-105 VB denotes shown
T1402 106-108 TO denotes to
T1403 109-115 VB denotes induce
T1404 116-121 NN denotes FOXP3
T1405 122-132 NN denotes expression
T1406 133-136 CC denotes and
T1407 137-148 JJ denotes suppressive
T1408 149-154 NN denotes cells
T1409 155-157 IN denotes in
T1410 158-163 JJ denotes human
T1411 164-165 -LRB- denotes [
T1412 165-170 CD denotes 11,12
T1413 170-171 -RRB- denotes ]
T1414 171-172 -COMMA- denotes ,
T1415 173-180 RB denotes however
T1416 181-184 DT denotes the
T1417 185-194 NN denotes phenotype
T1418 195-202 VB denotes appears
T1419 203-205 TO denotes to
T1420 206-208 VB denotes be
T1421 209-211 IN denotes of
T1422 212-221 JJ denotes transient
T1423 222-228 NN denotes nature
T1424 229-230 -LRB- denotes [
T1425 230-235 CD denotes 13,14
T1426 235-236 -RRB- denotes ]
R1160 T1384 T1382 arg1Of mechanisms,The
R1161 T1384 T1383 arg1Of mechanisms,exact
R1162 T1384 T1385 arg1Of mechanisms,of
R1163 T1384 T1388 arg1Of mechanisms,are
R1164 T1384 T1389 arg1Of mechanisms,unclear
R1165 T1387 T1385 arg2Of generation,of
R1166 T1387 T1386 arg1Of generation,iTreg
R1167 T1388 T1391 arg1Of are,but
R1168 T1389 T1388 arg2Of unclear,are
R1169 T1391 T1390 arg1Of but,","
R1170 T1396 T1395 arg2Of TCR,(
R1171 T1397 T1395 arg3Of ),(
R1172 T1398 T1392 arg1Of triggering,T
R1173 T1398 T1393 arg1Of triggering,cell
R1174 T1398 T1394 arg1Of triggering,receptor
R1175 T1398 T1395 arg1Of triggering,(
R1176 T1398 T1399 arg1Of triggering,has
R1177 T1398 T1400 arg1Of triggering,been
R1178 T1398 T1401 arg2Of triggering,shown
R1179 T1398 T1403 arg1Of triggering,induce
R1180 T1401 T1399 arg2Of shown,has
R1181 T1401 T1400 arg2Of shown,been
R1182 T1401 T1414 arg1Of shown,","
R1183 T1403 T1401 arg3Of induce,shown
R1184 T1403 T1402 arg1Of induce,to
R1185 T1405 T1404 arg1Of expression,FOXP3
R1186 T1405 T1406 arg1Of expression,and
R1187 T1406 T1403 arg2Of and,induce
R1188 T1406 T1409 arg1Of and,in
R1189 T1408 T1406 arg2Of cells,and
R1190 T1408 T1407 arg1Of cells,suppressive
R1191 T1410 T1409 arg2Of human,in
R1192 T1410 T1411 arg1Of human,[
R1193 T1412 T1411 arg2Of "11,12",[
R1194 T1413 T1411 arg3Of ],[
R1195 T1414 T1391 arg2Of ",",but
R1196 T1417 T1416 arg1Of phenotype,the
R1197 T1417 T1418 arg1Of phenotype,appears
R1198 T1417 T1420 arg1Of phenotype,be
R1199 T1417 T1421 arg1Of phenotype,of
R1200 T1418 T1414 arg2Of appears,","
R1201 T1418 T1415 arg1Of appears,however
R1202 T1420 T1418 arg2Of be,appears
R1203 T1420 T1419 arg1Of be,to
R1204 T1421 T1420 arg2Of of,be
R1205 T1423 T1421 arg2Of nature,of
R1206 T1423 T1422 arg1Of nature,transient
R1207 T1423 T1424 arg1Of nature,[
R1208 T1425 T1424 arg2Of "13,14",[
R1209 T1426 T1424 arg3Of ],[

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T2020 0-3 DT denotes The
T2021 4-9 JJ denotes exact
T2022 10-20 NNS denotes mechanisms
T2023 21-23 IN denotes of
T2024 24-29 NNP denotes iTreg
T2025 30-40 NN denotes generation
T2026 41-44 VBP denotes are
T2027 45-52 JJ denotes unclear
T2028 52-53 , denotes ,
T2029 54-57 CC denotes but
T2030 58-59 NNP denotes T
T2031 60-64 NN denotes cell
T2032 65-73 NN denotes receptor
T2033 74-75 -LRB- denotes (
T2034 75-78 NNP denotes TCR
T2035 78-79 -RRB- denotes )
T2036 80-90 VBG denotes triggering
T2037 91-94 VBZ denotes has
T2038 95-99 VBN denotes been
T2039 100-105 VBN denotes shown
T2040 106-108 TO denotes to
T2041 109-115 VB denotes induce
T2042 116-121 CD denotes FOXP3
T2043 122-132 NN denotes expression
T2044 133-136 CC denotes and
T2045 137-148 JJ denotes suppressive
T2046 149-154 NNS denotes cells
T2047 155-157 IN denotes in
T2048 158-163 JJ denotes human
T2049 164-165 NNP denotes [
T2050 165-170 CD denotes 11,12
T2051 170-171 NNP denotes ]
T2052 171-172 , denotes ,
T2053 173-180 RB denotes however
T2054 181-184 DT denotes the
T2055 185-194 NN denotes phenotype
T2056 195-202 VBZ denotes appears
T2057 203-205 TO denotes to
T2058 206-208 VB denotes be
T2059 209-211 IN denotes of
T2060 212-221 JJ denotes transient
T2061 222-228 NN denotes nature
T2062 229-230 NNP denotes [
T2063 230-235 CD denotes 13,14
T2064 235-236 NNP denotes ]
T2065 236-237 . denotes .
R1727 T2042 T2043 nummod FOXP3,expression
R1729 T2043 T2041 dobj expression,induce
R1730 T2044 T2043 cc and,expression
R1732 T2045 T2046 amod suppressive,cells
R1733 T2046 T2043 conj cells,expression
R1735 T2047 T2041 prep in,induce
R1736 T2048 T2049 amod human,[
R1737 T2049 T2051 compound [,]
R1739 T2050 T2051 compound "11,12",]
R1740 T2051 T2047 pobj ],in
R1741 T2052 T2041 punct ",",induce
R1742 T2053 T2056 advmod however,appears
R1743 T2054 T2055 det the,phenotype
R1744 T2055 T2056 nsubj phenotype,appears
R1745 T2056 T2039 conj appears,shown
R1747 T2057 T2058 aux to,be
R1748 T2058 T2056 xcomp be,appears
R1749 T2059 T2058 prep of,be
R1751 T2060 T2061 amod transient,nature
R1752 T2061 T2059 pobj nature,of
R1753 T2062 T2064 compound [,]
R1754 T2063 T2064 compound "13,14",]
R1756 T2064 T2056 oprd ],appears
R1757 T2065 T2056 punct .,appears
R1857 T2020 T2022 det The,mechanisms
R1858 T2021 T2022 amod exact,mechanisms
R1860 T2022 T2026 nsubj mechanisms,are
R1864 T2023 T2022 prep of,mechanisms
R1868 T2024 T2025 compound iTreg,generation
R1871 T2025 T2023 pobj generation,of
R1876 T2026 T2026 ROOT are,are
R1879 T2027 T2026 acomp unclear,are
R1882 T2028 T2026 punct ",",are
R1886 T2029 T2026 cc but,are
R1895 T2030 T2032 compound T,receptor
R1899 T2031 T2032 compound cell,receptor
R1902 T2032 T2039 nsubjpass receptor,shown
R1906 T2033 T2034 punct (,TCR
R1910 T2034 T2032 appos TCR,receptor
R1914 T2035 T2032 punct ),receptor
R1916 T2036 T2039 nsubjpass triggering,shown
R1917 T2037 T2039 aux has,shown
R1920 T2038 T2039 auxpass been,shown
R1922 T2039 T2026 conj shown,are
R1923 T2040 T2041 aux to,induce
R1925 T2041 T2039 xcomp induce,shown

GO-BP

Id Subject Object Predicate Lexical cue
T1009 75-78 http://purl.obolibrary.org/obo/GO_0006283 denotes TCR

GO-CC

Id Subject Object Predicate Lexical cue
T2291 60-64 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T2297 75-78 http://purl.obolibrary.org/obo/GO_0042101 denotes TCR

sentences

Id Subject Object Predicate Lexical cue
T989 0-237 Sentence denotes The exact mechanisms of iTreg generation are unclear, but T cell receptor (TCR) triggering has been shown to induce FOXP3 expression and suppressive cells in human [11,12], however the phenotype appears to be of transient nature [13,14].
T36 0-237 Sentence denotes The exact mechanisms of iTreg generation are unclear, but T cell receptor (TCR) triggering has been shown to induce FOXP3 expression and suppressive cells in human [11,12], however the phenotype appears to be of transient nature [13,14].

events-check-again

Id Subject Object Predicate Lexical cue
T2545 109-115 Positive_regulation denotes induce
T2546 116-121 Protein denotes FOXP3
T2547 122-132 Gene_expression denotes expression
R2141 T2546 T2547 themeOf FOXP3,expression
R2143 T2547 T2545 themeOf expression,induce

bionlp-st-ge-2016-reference-tees

Id Subject Object Predicate Lexical cue
T2336 58-73 Protein denotes T cell receptor
T2337 75-78 Protein denotes TCR
T2338 116-121 Protein denotes FOXP3
T2339 122-132 Gene_expression denotes expression
T2340 109-115 Positive_regulation denotes induce
R2030 T2338 T2339 themeOf FOXP3,expression
R2033 T2339 T2340 themeOf expression,induce

bionlp-st-ge-2016-reference

Id Subject Object Predicate Lexical cue
T948 109-115 Positive_regulation denotes induce
T949 116-121 Protein denotes FOXP3
T950 122-132 Gene_expression denotes expression
R753 T949 T950 themeOf FOXP3,expression
R754 T950 T948 themeOf expression,induce

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T1600 116-121 Q9BZS1 denotes FOXP3

test2

Id Subject Object Predicate Lexical cue
T894 109-115 Positive_regulation denotes induce
T895 116-121 Protein denotes FOXP3
T896 122-132 Gene_expression denotes expression
R725 T895 T896 themeOf FOXP3,expression
R726 T896 T894 themeOf expression,induce