PMC:2222968 / 40308-40499
Annnotations
2_test
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
18162042-17298430-84705063 | 187-189 | 17298430 | denotes | 63 |
T99961 | 187-189 | 17298430 | denotes | 63 |
pmc-enju-pas
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T20178 | 0-3 | DT | denotes | The |
T20179 | 4-9 | NN | denotes | cDNAs |
T20180 | 10-18 | VB | denotes | encoding |
T20181 | 19-24 | NN | denotes | GATA3 |
T20182 | 25-32 | NN | denotes | protein |
T20183 | 33-35 | CC | denotes | or |
T20184 | 36-39 | DT | denotes | the |
T20185 | 40-49 | VB | denotes | truncated |
T20186 | 50-55 | NN | denotes | GATA3 |
T20187 | 56-57 | -LRB- | denotes | ( |
T20188 | 57-64 | VB | denotes | lacking |
T20189 | 65-68 | DT | denotes | the |
T20190 | 69-72 | CD | denotes | two |
T20191 | 73-77 | NN | denotes | zinc |
T20192 | 78-85 | NN | denotes | fingers |
T20193 | 85-86 | -RRB- | denotes | ) |
T20194 | 87-91 | VB | denotes | were |
T20195 | 92-98 | VB | denotes | cloned |
T20196 | 99-101 | IN | denotes | in |
T20197 | 102-107 | NN | denotes | frame |
T20198 | 108-112 | IN | denotes | into |
T20199 | 113-115 | DT | denotes | an |
T20200 | 116-126 | NN | denotes | expression |
T20201 | 127-133 | NN | denotes | vector |
T20202 | 134-139 | IN | denotes | along |
T20203 | 140-144 | IN | denotes | with |
T20204 | 145-148 | DT | denotes | the |
T20205 | 149-152 | NN | denotes | TAT |
T20206 | 153-161 | NN | denotes | sequence |
T20207 | 162-164 | IN | denotes | as |
T20208 | 165-175 | RB | denotes | previously |
T20209 | 176-185 | VB | denotes | described |
T20210 | 186-187 | -LRB- | denotes | [ |
T20211 | 187-189 | CD | denotes | 63 |
T20212 | 189-190 | -RRB- | denotes | ] |
R15113 | T20179 | T20178 | arg1Of | cDNAs,The |
R15114 | T20179 | T20180 | arg1Of | cDNAs,encoding |
R15115 | T20179 | T20187 | arg1Of | cDNAs,( |
R15116 | T20179 | T20194 | arg1Of | cDNAs,were |
R15117 | T20179 | T20195 | arg2Of | cDNAs,cloned |
R15118 | T20182 | T20181 | arg1Of | protein,GATA3 |
R15119 | T20182 | T20183 | arg1Of | protein,or |
R15120 | T20183 | T20180 | arg2Of | or,encoding |
R15121 | T20186 | T20183 | arg2Of | GATA3,or |
R15122 | T20186 | T20184 | arg1Of | GATA3,the |
R15123 | T20186 | T20185 | arg2Of | GATA3,truncated |
R15124 | T20188 | T20187 | arg2Of | lacking,( |
R15125 | T20192 | T20188 | arg2Of | fingers,lacking |
R15126 | T20192 | T20189 | arg1Of | fingers,the |
R15127 | T20192 | T20190 | arg1Of | fingers,two |
R15128 | T20192 | T20191 | arg1Of | fingers,zinc |
R15129 | T20193 | T20187 | arg3Of | ),( |
R15130 | T20195 | T20194 | arg2Of | cloned,were |
R15131 | T20195 | T20196 | arg1Of | cloned,in |
R15132 | T20195 | T20198 | arg1Of | cloned,into |
R15133 | T20195 | T20203 | arg1Of | cloned,with |
R15134 | T20197 | T20196 | arg2Of | frame,in |
R15135 | T20201 | T20198 | arg2Of | vector,into |
R15136 | T20201 | T20199 | arg1Of | vector,an |
R15137 | T20201 | T20200 | arg1Of | vector,expression |
R15138 | T20203 | T20202 | arg1Of | with,along |
R15139 | T20206 | T20203 | arg2Of | sequence,with |
R15140 | T20206 | T20204 | arg1Of | sequence,the |
R15141 | T20206 | T20205 | arg1Of | sequence,TAT |
R15142 | T20206 | T20207 | arg1Of | sequence,as |
R15143 | T20209 | T20208 | arg1Of | described,previously |
R15144 | T20211 | T20207 | arg2Of | 63,as |
R15145 | T20211 | T20209 | arg1Of | 63,described |
R15146 | T20211 | T20210 | arg2Of | 63,[ |
R15147 | T20212 | T20210 | arg3Of | ],[ |
bionlp-st-ge-2016-spacy-parsed
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T20276 | 0-3 | DT | denotes | The |
T20277 | 4-9 | NNP | denotes | cDNAs |
T20278 | 10-18 | VBG | denotes | encoding |
T20279 | 19-24 | CD | denotes | GATA3 |
T20280 | 25-32 | NN | denotes | protein |
T20281 | 33-35 | CC | denotes | or |
T20282 | 36-39 | DT | denotes | the |
T20283 | 40-49 | VBN | denotes | truncated |
T20284 | 50-55 | NNP | denotes | GATA3 |
T20285 | 56-57 | -LRB- | denotes | ( |
T20286 | 57-64 | VBG | denotes | lacking |
T20287 | 65-68 | DT | denotes | the |
T20288 | 69-72 | CD | denotes | two |
T20289 | 73-77 | NN | denotes | zinc |
T20290 | 78-85 | NNS | denotes | fingers |
T20291 | 85-86 | -RRB- | denotes | ) |
T20292 | 87-91 | VBD | denotes | were |
T20293 | 92-98 | VBN | denotes | cloned |
T20294 | 99-101 | IN | denotes | in |
T20295 | 102-107 | NN | denotes | frame |
T20296 | 108-112 | IN | denotes | into |
T20297 | 113-115 | DT | denotes | an |
T20298 | 116-126 | NN | denotes | expression |
T20299 | 127-133 | NN | denotes | vector |
T20300 | 134-139 | IN | denotes | along |
T20301 | 140-144 | IN | denotes | with |
T20302 | 145-148 | DT | denotes | the |
T20303 | 149-152 | NNP | denotes | TAT |
T20304 | 153-161 | NN | denotes | sequence |
T20305 | 162-164 | IN | denotes | as |
T20306 | 165-175 | RB | denotes | previously |
T20307 | 176-185 | VBN | denotes | described |
T20308 | 186-187 | NNP | denotes | [ |
T20309 | 187-189 | CD | denotes | 63 |
T20310 | 189-190 | NNP | denotes | ] |
T20311 | 190-191 | . | denotes | . |
R15193 | T20276 | T20280 | det | The,protein |
R15194 | T20277 | T20278 | nsubj | cDNAs,encoding |
R15195 | T20278 | T20280 | amod | encoding,protein |
R15196 | T20279 | T20280 | nummod | GATA3,protein |
R15197 | T20280 | T20293 | nsubjpass | protein,cloned |
R15198 | T20281 | T20280 | cc | or,protein |
R15199 | T20282 | T20284 | det | the,GATA3 |
R15200 | T20283 | T20284 | amod | truncated,GATA3 |
R15201 | T20284 | T20280 | conj | GATA3,protein |
R15202 | T20285 | T20286 | punct | (,lacking |
R15203 | T20286 | T20284 | acl | lacking,GATA3 |
R15204 | T20287 | T20290 | det | the,fingers |
R15205 | T20288 | T20290 | nummod | two,fingers |
R15206 | T20289 | T20290 | compound | zinc,fingers |
R15207 | T20290 | T20286 | dobj | fingers,lacking |
R15208 | T20291 | T20290 | punct | ),fingers |
R15209 | T20292 | T20293 | auxpass | were,cloned |
R15210 | T20293 | T20293 | ROOT | cloned,cloned |
R15211 | T20294 | T20293 | prep | in,cloned |
R15212 | T20295 | T20294 | pobj | frame,in |
R15213 | T20296 | T20293 | prep | into,cloned |
R15214 | T20297 | T20299 | det | an,vector |
R15215 | T20298 | T20299 | compound | expression,vector |
R15216 | T20299 | T20296 | pobj | vector,into |
R15217 | T20300 | T20299 | prep | along,vector |
R15218 | T20301 | T20300 | prep | with,along |
R15219 | T20302 | T20304 | det | the,sequence |
R15220 | T20303 | T20304 | compound | TAT,sequence |
R15221 | T20304 | T20301 | pobj | sequence,with |
R15222 | T20305 | T20307 | mark | as,described |
R15223 | T20306 | T20307 | advmod | previously,described |
R15224 | T20307 | T20293 | advcl | described,cloned |
R15225 | T20308 | T20310 | nmod | [,] |
R15226 | T20309 | T20310 | nummod | 63,] |
R15227 | T20310 | T20307 | dobj | ],described |
R15228 | T20311 | T20293 | punct | .,cloned |
sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T20172 | 0-191 | Sentence | denotes | The cDNAs encoding GATA3 protein or the truncated GATA3 (lacking the two zinc fingers) were cloned in frame into an expression vector along with the TAT sequence as previously described [63]. |
T300 | 0-191 | Sentence | denotes | The cDNAs encoding GATA3 protein or the truncated GATA3 (lacking the two zinc fingers) were cloned in frame into an expression vector along with the TAT sequence as previously described [63]. |
events-check-again
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T20393 | 19-24 | Protein | denotes | GATA3 |
T20394 | 50-55 | Protein | denotes | GATA3 |
T20395 | 57-64 | Negative_regulation | denotes | lacking |
T20396 | 69-85 | Entity | denotes | two zinc fingers |
T20397 | 149-152 | Protein | denotes | TAT |
R15284 | T20396 | T20395 | themeOf | two zinc fingers,lacking |
R15285 | T20396 | T20394 | partOf | two zinc fingers,GATA3 |
bionlp-st-ge-2016-reference-tees
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T20369 | 78-85 | Entity | denotes | fingers |
T20366 | 19-32 | Protein | denotes | GATA3 protein |
T20367 | 50-55 | Protein | denotes | GATA3 |
T20368 | 149-161 | Protein | denotes | TAT sequence |
T20370 | 57-64 | Negative_regulation | denotes | lacking |
R15277 | T20367 | T20370 | themeOf | GATA3,lacking |
R15278 | T20367 | T20369 | partOf | GATA3,fingers |
R15279 | T20369 | T20370 | Site | fingers,lacking |
bionlp-st-ge-2016-reference
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T20165 | 19-24 | Protein | denotes | GATA3 |
T20166 | 50-55 | Protein | denotes | GATA3 |
T20167 | 57-64 | Negative_regulation | denotes | lacking |
T20168 | 69-85 | Entity | denotes | two zinc fingers |
T20169 | 149-152 | Protein | denotes | TAT |
R15109 | T20168 | T20167 | themeOf | two zinc fingers,lacking |
R15110 | T20168 | T20166 | partOf | two zinc fingers,GATA3 |
bionlp-st-ge-2016-uniprot
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T20258 | 19-24 | P23771 | denotes | GATA3 |
T20259 | 50-55 | P23771 | denotes | GATA3 |
T20260 | 149-152 | P04610 | denotes | TAT |
T20261 | 149-152 | Q8UMQ1 | denotes | TAT |
T20262 | 149-152 | P04608 | denotes | TAT |
T20263 | 149-152 | P04605 | denotes | TAT |
test2
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T20158 | 19-24 | Protein | denotes | GATA3 |
T20159 | 50-55 | Protein | denotes | GATA3 |
T20160 | 57-64 | Negative_regulation | denotes | lacking |
T20161 | 69-85 | Entity | denotes | two zinc fingers |
T20162 | 149-152 | Protein | denotes | TAT |
R15107 | T20161 | T20160 | themeOf | two zinc fingers,lacking |
R15108 | T20161 | T20159 | partOf | two zinc fingers,GATA3 |