PMC:2222968 / 390-586 JSONTXT

Annnotations TAB JSON ListView MergeView

{"target":"https://pubannotation.org/docs/sourcedb/PMC/sourceid/2222968","sourcedb":"PMC","sourceid":"2222968","source_url":"http://www.ncbi.nlm.nih.gov/pmc/2222968","text":"XP3 is an essential transcription factor for natural, thymus-derived (nTreg) and inducible Treg (iTreg) commitment; however, the mechanisms regulating its expression are as yet unknown. We describ","tracks":[{"project":"pmc-enju-pas","denotations":[{"id":"T160","span":{"begin":4,"end":6},"obj":"VB"},{"id":"T161","span":{"begin":7,"end":9},"obj":"DT"},{"id":"T162","span":{"begin":10,"end":19},"obj":"JJ"},{"id":"T163","span":{"begin":20,"end":33},"obj":"NN"},{"id":"T164","span":{"begin":34,"end":40},"obj":"NN"},{"id":"T165","span":{"begin":41,"end":44},"obj":"IN"},{"id":"T166","span":{"begin":45,"end":52},"obj":"JJ"},{"id":"T167","span":{"begin":52,"end":53},"obj":"-COMMA-"},{"id":"T168","span":{"begin":54,"end":68},"obj":"JJ"},{"id":"T169","span":{"begin":69,"end":70},"obj":"-LRB-"},{"id":"T170","span":{"begin":70,"end":75},"obj":"NN"},{"id":"T171","span":{"begin":75,"end":76},"obj":"-RRB-"},{"id":"T172","span":{"begin":77,"end":80},"obj":"CC"},{"id":"T173","span":{"begin":81,"end":90},"obj":"JJ"},{"id":"T174","span":{"begin":91,"end":95},"obj":"NN"},{"id":"T175","span":{"begin":96,"end":97},"obj":"-LRB-"},{"id":"T176","span":{"begin":97,"end":102},"obj":"NN"},{"id":"T177","span":{"begin":102,"end":103},"obj":"-RRB-"},{"id":"T178","span":{"begin":104,"end":114},"obj":"NN"},{"id":"T179","span":{"begin":114,"end":115},"obj":"-COLON-"},{"id":"T180","span":{"begin":116,"end":123},"obj":"RB"},{"id":"T181","span":{"begin":123,"end":124},"obj":"-COMMA-"},{"id":"T182","span":{"begin":125,"end":128},"obj":"DT"},{"id":"T183","span":{"begin":129,"end":139},"obj":"NN"},{"id":"T184","span":{"begin":140,"end":150},"obj":"VB"},{"id":"T185","span":{"begin":151,"end":154},"obj":"PRP-DOLLAR-"},{"id":"T186","span":{"begin":155,"end":165},"obj":"NN"},{"id":"T187","span":{"begin":166,"end":169},"obj":"VB"},{"id":"T188","span":{"begin":170,"end":172},"obj":"RB"},{"id":"T189","span":{"begin":173,"end":176},"obj":"RB"},{"id":"T190","span":{"begin":177,"end":184},"obj":"JJ"},{"id":"T191","span":{"begin":186,"end":188},"obj":"PRP"}],"relations":[{"id":"R102","pred":"arg1Of","subj":"T160","obj":"T179"},{"id":"R103","pred":"arg2Of","subj":"T164","obj":"T160"},{"id":"R104","pred":"arg1Of","subj":"T164","obj":"T161"},{"id":"R105","pred":"arg1Of","subj":"T164","obj":"T162"},{"id":"R106","pred":"arg1Of","subj":"T164","obj":"T163"},{"id":"R107","pred":"arg1Of","subj":"T164","obj":"T165"},{"id":"R108","pred":"arg1Of","subj":"T166","obj":"T167"},{"id":"R109","pred":"arg2Of","subj":"T168","obj":"T167"},{"id":"R110","pred":"arg1Of","subj":"T170","obj":"T166"},{"id":"R111","pred":"arg1Of","subj":"T170","obj":"T168"},{"id":"R112","pred":"arg2Of","subj":"T170","obj":"T169"},{"id":"R113","pred":"arg1Of","subj":"T170","obj":"T172"},{"id":"R114","pred":"arg3Of","subj":"T171","obj":"T169"},{"id":"R115","pred":"arg2Of","subj":"T172","obj":"T165"},{"id":"R116","pred":"arg2Of","subj":"T176","obj":"T175"},{"id":"R117","pred":"arg3Of","subj":"T177","obj":"T175"},{"id":"R118","pred":"arg2Of","subj":"T178","obj":"T172"},{"id":"R119","pred":"arg1Of","subj":"T178","obj":"T173"},{"id":"R120","pred":"arg1Of","subj":"T178","obj":"T174"},{"id":"R121","pred":"arg1Of","subj":"T178","obj":"T175"},{"id":"R122","pred":"arg1Of","subj":"T183","obj":"T182"},{"id":"R123","pred":"arg1Of","subj":"T183","obj":"T184"},{"id":"R124","pred":"arg1Of","subj":"T183","obj":"T187"},{"id":"R125","pred":"arg1Of","subj":"T183","obj":"T190"},{"id":"R126","pred":"arg2Of","subj":"T186","obj":"T184"},{"id":"R127","pred":"arg1Of","subj":"T186","obj":"T185"},{"id":"R128","pred":"arg2Of","subj":"T187","obj":"T179"},{"id":"R129","pred":"arg1Of","subj":"T187","obj":"T180"},{"id":"R130","pred":"arg1Of","subj":"T187","obj":"T181"},{"id":"R131","pred":"arg1Of","subj":"T187","obj":"T189"},{"id":"R132","pred":"arg1Of","subj":"T189","obj":"T188"},{"id":"R133","pred":"arg2Of","subj":"T190","obj":"T187"}],"namespaces":[{"prefix":"_base","uri":"http://kmcs.nii.ac.jp/enju/"}],"attributes":[{"subj":"T160","pred":"source","obj":"pmc-enju-pas"},{"subj":"T161","pred":"source","obj":"pmc-enju-pas"},{"subj":"T162","pred":"source","obj":"pmc-enju-pas"},{"subj":"T163","pred":"source","obj":"pmc-enju-pas"},{"subj":"T164","pred":"source","obj":"pmc-enju-pas"},{"subj":"T165","pred":"source","obj":"pmc-enju-pas"},{"subj":"T166","pred":"source","obj":"pmc-enju-pas"},{"subj":"T167","pred":"source","obj":"pmc-enju-pas"},{"subj":"T168","pred":"source","obj":"pmc-enju-pas"},{"subj":"T169","pred":"source","obj":"pmc-enju-pas"},{"subj":"T170","pred":"source","obj":"pmc-enju-pas"},{"subj":"T171","pred":"source","obj":"pmc-enju-pas"},{"subj":"T172","pred":"source","obj":"pmc-enju-pas"},{"subj":"T173","pred":"source","obj":"pmc-enju-pas"},{"subj":"T174","pred":"source","obj":"pmc-enju-pas"},{"subj":"T175","pred":"source","obj":"pmc-enju-pas"},{"subj":"T176","pred":"source","obj":"pmc-enju-pas"},{"subj":"T177","pred":"source","obj":"pmc-enju-pas"},{"subj":"T178","pred":"source","obj":"pmc-enju-pas"},{"subj":"T179","pred":"source","obj":"pmc-enju-pas"},{"subj":"T180","pred":"source","obj":"pmc-enju-pas"},{"subj":"T181","pred":"source","obj":"pmc-enju-pas"},{"subj":"T182","pred":"source","obj":"pmc-enju-pas"},{"subj":"T183","pred":"source","obj":"pmc-enju-pas"},{"subj":"T184","pred":"source","obj":"pmc-enju-pas"},{"subj":"T185","pred":"source","obj":"pmc-enju-pas"},{"subj":"T186","pred":"source","obj":"pmc-enju-pas"},{"subj":"T187","pred":"source","obj":"pmc-enju-pas"},{"subj":"T188","pred":"source","obj":"pmc-enju-pas"},{"subj":"T189","pred":"source","obj":"pmc-enju-pas"},{"subj":"T190","pred":"source","obj":"pmc-enju-pas"},{"subj":"T191","pred":"source","obj":"pmc-enju-pas"}]},{"project":"bionlp-st-ge-2016-coref","denotations":[{"id":"T335","span":{"begin":151,"end":154},"obj":"Anaphor"}],"namespaces":[{"prefix":"_base","uri":"https://bionlp.dbcls.jp/ontology/ge.owl#"}],"attributes":[{"subj":"T335","pred":"source","obj":"bionlp-st-ge-2016-coref"}]},{"project":"bionlp-st-ge-2016-spacy-parsed","denotations":[{"id":"T416","span":{"begin":4,"end":6},"obj":"VBZ"},{"id":"T417","span":{"begin":7,"end":9},"obj":"DT"},{"id":"T418","span":{"begin":10,"end":19},"obj":"JJ"},{"id":"T419","span":{"begin":20,"end":33},"obj":"NN"},{"id":"T420","span":{"begin":34,"end":40},"obj":"NN"},{"id":"T421","span":{"begin":41,"end":44},"obj":"IN"},{"id":"T422","span":{"begin":45,"end":52},"obj":"JJ"},{"id":"T423","span":{"begin":52,"end":53},"obj":","},{"id":"T424","span":{"begin":54,"end":68},"obj":"JJ"},{"id":"T425","span":{"begin":69,"end":70},"obj":"-LRB-"},{"id":"T426","span":{"begin":70,"end":75},"obj":"NNP"},{"id":"T427","span":{"begin":75,"end":76},"obj":"-RRB-"},{"id":"T428","span":{"begin":77,"end":80},"obj":"CC"},{"id":"T429","span":{"begin":81,"end":90},"obj":"JJ"},{"id":"T430","span":{"begin":91,"end":95},"obj":"NNP"},{"id":"T431","span":{"begin":96,"end":97},"obj":"-LRB-"},{"id":"T432","span":{"begin":97,"end":102},"obj":"NNP"},{"id":"T433","span":{"begin":102,"end":103},"obj":"-RRB-"},{"id":"T434","span":{"begin":104,"end":114},"obj":"NN"},{"id":"T435","span":{"begin":114,"end":115},"obj":":"},{"id":"T436","span":{"begin":116,"end":123},"obj":"RB"},{"id":"T437","span":{"begin":123,"end":124},"obj":","},{"id":"T438","span":{"begin":125,"end":128},"obj":"DT"},{"id":"T439","span":{"begin":129,"end":139},"obj":"NNS"},{"id":"T440","span":{"begin":140,"end":150},"obj":"VBG"},{"id":"T441","span":{"begin":151,"end":154},"obj":"PRP$"},{"id":"T442","span":{"begin":155,"end":165},"obj":"NN"},{"id":"T443","span":{"begin":166,"end":169},"obj":"VBP"},{"id":"T444","span":{"begin":170,"end":172},"obj":"RB"},{"id":"T445","span":{"begin":173,"end":176},"obj":"RB"},{"id":"T446","span":{"begin":177,"end":184},"obj":"JJ"},{"id":"T447","span":{"begin":184,"end":185},"obj":"."},{"id":"T448","span":{"begin":186,"end":188},"obj":"PRP"}],"relations":[{"id":"R336","pred":"ccomp","subj":"T416","obj":"T443"},{"id":"R337","pred":"det","subj":"T417","obj":"T420"},{"id":"R338","pred":"amod","subj":"T418","obj":"T420"},{"id":"R339","pred":"compound","subj":"T419","obj":"T420"},{"id":"R340","pred":"attr","subj":"T420","obj":"T416"},{"id":"R341","pred":"prep","subj":"T421","obj":"T420"},{"id":"R342","pred":"amod","subj":"T422","obj":"T430"},{"id":"R343","pred":"punct","subj":"T423","obj":"T422"},{"id":"R344","pred":"conj","subj":"T424","obj":"T422"},{"id":"R345","pred":"punct","subj":"T425","obj":"T426"},{"id":"R346","pred":"appos","subj":"T426","obj":"T424"},{"id":"R347","pred":"punct","subj":"T427","obj":"T426"},{"id":"R348","pred":"cc","subj":"T428","obj":"T424"},{"id":"R349","pred":"conj","subj":"T429","obj":"T424"},{"id":"R350","pred":"pobj","subj":"T430","obj":"T421"},{"id":"R351","pred":"punct","subj":"T431","obj":"T432"},{"id":"R352","pred":"appos","subj":"T432","obj":"T430"},{"id":"R353","pred":"punct","subj":"T433","obj":"T430"},{"id":"R354","pred":"conj","subj":"T434","obj":"T420"},{"id":"R355","pred":"punct","subj":"T435","obj":"T443"},{"id":"R356","pred":"advmod","subj":"T436","obj":"T443"},{"id":"R357","pred":"punct","subj":"T437","obj":"T443"},{"id":"R358","pred":"det","subj":"T438","obj":"T439"},{"id":"R359","pred":"nsubj","subj":"T439","obj":"T443"},{"id":"R360","pred":"acl","subj":"T440","obj":"T439"},{"id":"R361","pred":"poss","subj":"T441","obj":"T442"},{"id":"R362","pred":"dobj","subj":"T442","obj":"T440"},{"id":"R363","pred":"ROOT","subj":"T443","obj":"T443"},{"id":"R364","pred":"advmod","subj":"T444","obj":"T446"},{"id":"R365","pred":"advmod","subj":"T445","obj":"T446"},{"id":"R366","pred":"acomp","subj":"T446","obj":"T443"},{"id":"R367","pred":"punct","subj":"T447","obj":"T443"}],"attributes":[{"subj":"T416","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T417","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T418","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T419","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T420","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T421","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T422","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T423","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T424","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T425","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T426","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T427","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T428","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T429","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T430","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T431","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T432","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T433","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T434","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T435","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T436","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T437","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T438","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T439","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T440","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T441","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T442","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T443","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T444","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T445","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T446","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T447","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T448","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"}]},{"project":"UBERON-AE","denotations":[{"id":"T57","span":{"begin":54,"end":60},"obj":"http://purl.obolibrary.org/obo/UBERON_0002370"}],"attributes":[{"subj":"T57","pred":"source","obj":"UBERON-AE"}]},{"project":"GO-BP","denotations":[{"id":"T69","span":{"begin":20,"end":33},"obj":"http://purl.obolibrary.org/obo/GO_0006351"}],"attributes":[{"subj":"T69","pred":"source","obj":"GO-BP"}]},{"project":"events-check-again","denotations":[{"id":"T759","span":{"begin":140,"end":150},"obj":"Regulation"},{"id":"T760","span":{"begin":155,"end":165},"obj":"Gene_expression"}],"relations":[{"id":"R658","pred":"themeOf","subj":"T760","obj":"T759"}],"attributes":[{"id":"M7","pred":"Speculation","subj":"T759","obj":"true"},{"subj":"T759","pred":"source","obj":"events-check-again"},{"subj":"T760","pred":"source","obj":"events-check-again"}]},{"project":"bionlp-st-ge-2016-reference-tees","denotations":[{"id":"T650","span":{"begin":155,"end":165},"obj":"Gene_expression"},{"id":"T651","span":{"begin":140,"end":150},"obj":"Regulation"}],"relations":[{"id":"R546","pred":"themeOf","subj":"T650","obj":"T651"}],"attributes":[{"subj":"T650","pred":"source","obj":"bionlp-st-ge-2016-reference-tees"},{"subj":"T651","pred":"source","obj":"bionlp-st-ge-2016-reference-tees"}]},{"project":"bionlp-st-ge-2016-reference","denotations":[{"id":"T85","span":{"begin":140,"end":150},"obj":"Regulation"},{"id":"T86","span":{"begin":155,"end":165},"obj":"Gene_expression"}],"relations":[{"id":"R622","pred":"themeOf","subj":"T86","obj":"T85"}],"attributes":[{"id":"M6","pred":"Speculation","subj":"T85","obj":"true"},{"subj":"T85","pred":"source","obj":"bionlp-st-ge-2016-reference"},{"subj":"T86","pred":"source","obj":"bionlp-st-ge-2016-reference"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}]}],"config":{"attribute types":[{"pred":"source","value type":"selection","values":[{"id":"pmc-enju-pas","color":"#93d0ec","default":true},{"id":"bionlp-st-ge-2016-coref","color":"#eaec93"},{"id":"bionlp-st-ge-2016-spacy-parsed","color":"#d493ec"},{"id":"UBERON-AE","color":"#93ecba"},{"id":"GO-BP","color":"#eca093"},{"id":"events-check-again","color":"#93a0ec"},{"id":"bionlp-st-ge-2016-reference-tees","color":"#baec93"},{"id":"bionlp-st-ge-2016-reference","color":"#ec93d4"}]}]}}