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PMC:2222968 / 3576-3758 JSONTXT

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2_test

Id Subject Object Predicate Lexical cue
18162042-10626890-84704997 38-39 10626890 denotes 1
18162042-9846495-84704998 40-41 9846495 denotes 2
18162042-16467870-84704999 91-92 16467870 denotes 3
T91765 38-39 10626890 denotes 1
T15814 40-41 9846495 denotes 2
T97197 91-92 16467870 denotes 3

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T1125 4-6 IN denotes in
T1126 7-10 DT denotes the
T1127 11-16 JJ denotes early
T1128 17-22 NN denotes phase
T1129 23-25 IN denotes of
T1130 26-36 NN denotes commitment
T1131 37-38 -LRB- denotes [
T1132 38-41 CD denotes 1,2
T1133 41-42 -RRB- denotes ]
T1134 44-49 NN denotes GATA3
T1135 50-52 VB denotes is
T1136 53-63 JJ denotes sufficient
T1137 64-66 TO denotes to
T1138 67-73 VB denotes induce
T1139 74-75 DT denotes a
T1140 76-79 NN denotes Th2
T1141 80-89 NN denotes phenotype
T1142 90-91 -LRB- denotes [
T1143 91-92 CD denotes 3
T1144 92-93 -RRB- denotes ]
T1145 94-97 CC denotes and
T1146 98-102 VB denotes acts
T1147 103-106 RB denotes not
T1148 107-111 RB denotes only
T1149 112-119 IN denotes through
T1150 120-123 DT denotes the
T1151 124-133 NN denotes induction
T1152 134-136 IN denotes of
T1153 137-141 NN denotes IL-4
T1154 141-142 -COMMA- denotes ,
T1155 143-147 NN denotes IL-5
T1156 148-151 CC denotes and
T1157 152-157 NN denotes IL-13
T1158 157-158 -COMMA- denotes ,
T1159 159-162 DT denotes the
T1160 163-166 NN denotes Th2
T1161 167-176 NN denotes cytokines
T1162 176-177 -COMMA- denotes ,
T1163 178-181 CC denotes but
R889 T1128 T1125 arg2Of phase,in
R890 T1128 T1126 arg1Of phase,the
R891 T1128 T1127 arg1Of phase,early
R892 T1128 T1129 arg1Of phase,of
R893 T1130 T1129 arg2Of commitment,of
R894 T1130 T1131 arg1Of commitment,[
R895 T1132 T1131 arg2Of "1,2",[
R896 T1133 T1131 arg3Of ],[
R897 T1134 T1135 arg1Of GATA3,is
R898 T1134 T1136 arg1Of GATA3,sufficient
R899 T1134 T1138 arg1Of GATA3,induce
R900 T1134 T1146 arg1Of GATA3,acts
R901 T1135 T1145 arg1Of is,and
R902 T1136 T1135 arg2Of sufficient,is
R903 T1138 T1136 arg2Of induce,sufficient
R904 T1138 T1137 arg1Of induce,to
R905 T1138 T1142 arg1Of induce,[
R906 T1141 T1138 arg2Of phenotype,induce
R907 T1141 T1139 arg1Of phenotype,a
R908 T1141 T1140 arg1Of phenotype,Th2
R909 T1143 T1142 arg2Of 3,[
R910 T1144 T1142 arg3Of ],[
R911 T1146 T1145 arg2Of acts,and
R912 T1146 T1149 arg1Of acts,through
R914 T1148 T1147 arg1Of only,not
R915 T1149 T1163 arg1Of through,but
R916 T1151 T1149 arg2Of induction,through
R917 T1151 T1150 arg1Of induction,the
R918 T1151 T1152 arg1Of induction,of
R919 T1153 T1154 arg1Of IL-4,","
R920 T1154 T1156 arg1Of ",",and
R921 T1155 T1154 arg2Of IL-5,","
R922 T1156 T1152 arg2Of and,of
R923 T1156 T1158 arg1Of and,","
R924 T1157 T1156 arg2Of IL-13,and
R925 T1161 T1158 arg2Of cytokines,","
R926 T1161 T1159 arg1Of cytokines,the
R927 T1161 T1160 arg1Of cytokines,Th2
R928 T1163 T1148 arg1Of but,only
R929 T1163 T1162 arg1Of but,","

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T1752 4-6 IN denotes in
T1753 7-10 DT denotes the
T1754 11-16 JJ denotes early
T1755 17-22 NN denotes phase
T1756 23-25 IN denotes of
T1757 26-36 NN denotes commitment
T1758 37-38 NNP denotes [
T1759 38-41 CD denotes 1,2
T1760 41-42 NNP denotes ]
T1761 42-43 . denotes .
T1762 44-49 CD denotes GATA3
T1763 50-52 VBZ denotes is
T1764 53-63 JJ denotes sufficient
T1765 64-66 TO denotes to
T1766 67-73 VB denotes induce
T1767 74-75 DT denotes a
T1768 76-79 JJ denotes Th2
T1769 80-89 NN denotes phenotype
T1770 90-91 NN denotes [
T1771 91-92 CD denotes 3
T1772 92-93 NNP denotes ]
T1773 94-97 CC denotes and
T1774 98-102 VBZ denotes acts
T1775 103-106 RB denotes not
T1776 107-111 RB denotes only
T1777 112-119 IN denotes through
T1778 120-123 DT denotes the
T1779 124-133 NN denotes induction
T1780 134-136 IN denotes of
T1781 137-141 NN denotes IL-4
T1782 141-142 , denotes ,
T1783 143-147 NN denotes IL-5
T1784 148-151 CC denotes and
T1785 152-157 NN denotes IL-13
T1786 157-158 , denotes ,
T1787 159-162 DT denotes the
T1788 163-166 NNP denotes Th2
T1789 167-176 NNS denotes cytokines
T1790 176-177 , denotes ,
T1791 178-181 CC denotes but
R1493 T1753 T1755 det the,phase
R1494 T1754 T1755 amod early,phase
R1495 T1755 T1752 pobj phase,in
R1496 T1756 T1755 prep of,phase
R1497 T1757 T1756 pobj commitment,of
R1498 T1758 T1760 compound [,]
R1499 T1759 T1760 compound "1,2",]
R1500 T1760 T1760 ROOT ],]
R1502 T1762 T1763 nsubj GATA3,is
R1503 T1763 T1763 ROOT is,is
R1504 T1764 T1763 acomp sufficient,is
R1505 T1765 T1766 aux to,induce
R1506 T1766 T1764 xcomp induce,sufficient
R1507 T1767 T1774 det a,acts
R1508 T1768 T1770 amod Th2,[
R1509 T1769 T1770 compound phenotype,[
R1510 T1770 T1774 nummod [,acts
R1511 T1771 T1770 nummod 3,[
R1512 T1772 T1770 appos ],[
R1513 T1773 T1770 cc and,[
R1514 T1774 T1766 dobj acts,induce
R1515 T1775 T1777 preconj not,through
R1516 T1776 T1775 advmod only,not
R1517 T1777 T1774 prep through,acts
R1518 T1778 T1779 det the,induction
R1519 T1779 T1777 pobj induction,through
R1520 T1780 T1779 prep of,induction
R1521 T1781 T1780 pobj IL-4,of
R1522 T1782 T1781 punct ",",IL-4
R1523 T1783 T1781 conj IL-5,IL-4
R1524 T1784 T1783 cc and,IL-5
R1525 T1785 T1783 conj IL-13,IL-5
R1526 T1786 T1785 punct ",",IL-13
R1527 T1787 T1789 det the,cytokines
R1528 T1788 T1789 compound Th2,cytokines
R1529 T1789 T1779 appos cytokines,induction
R1530 T1790 T1774 punct ",",acts
R1531 T1791 T1774 cc but,acts

GO-MF

Id Subject Object Predicate Lexical cue
T2282 137-141 http://purl.obolibrary.org/obo/GO_0005136 denotes IL-4
T2285 143-147 http://purl.obolibrary.org/obo/GO_0005137 denotes IL-5
T2286 152-157 http://purl.obolibrary.org/obo/GO_0005144 denotes IL-13

events-check-again

Id Subject Object Predicate Lexical cue
T2523 44-49 Protein denotes GATA3
T2524 124-133 Positive_regulation denotes induction
T2525 124-133 Positive_regulation denotes induction
T2526 124-133 Positive_regulation denotes induction
T2527 137-141 Protein denotes IL-4
T2528 143-147 Protein denotes IL-5
T2529 152-157 Protein denotes IL-13
R2121 T2523 T2524 causeOf GATA3,induction
R2122 T2523 T2526 causeOf GATA3,induction
R2123 T2523 T2525 causeOf GATA3,induction
R2125 T2527 T2525 themeOf IL-4,induction
R2126 T2528 T2524 themeOf IL-5,induction
R2127 T2529 T2526 themeOf IL-13,induction

bionlp-st-ge-2016-reference-tees

Id Subject Object Predicate Lexical cue
T2309 44-49 Protein denotes GATA3
T2310 137-141 Protein denotes IL-4
T2311 143-147 Protein denotes IL-5
T2312 152-157 Protein denotes IL-13
T2314 124-133 Positive_regulation denotes induction
T2315 124-133 Positive_regulation denotes induction
T2316 124-133 Positive_regulation denotes induction
R2005 T2309 T2314 causeOf GATA3,induction
R2006 T2309 T2315 causeOf GATA3,induction
R2007 T2309 T2316 causeOf GATA3,induction
R2009 T2310 T2314 themeOf IL-4,induction
R2011 T2311 T2315 themeOf IL-5,induction
R2012 T2312 T2316 themeOf IL-13,induction

bionlp-st-ge-2016-reference

Id Subject Object Predicate Lexical cue
T926 44-49 Protein denotes GATA3
T927 124-133 Positive_regulation denotes induction
T928 124-133 Positive_regulation denotes induction
T929 124-133 Positive_regulation denotes induction
T930 137-141 Protein denotes IL-4
T931 143-147 Protein denotes IL-5
T932 152-157 Protein denotes IL-13
R740 T926 T927 causeOf GATA3,induction
R741 T926 T929 causeOf GATA3,induction
R742 T926 T928 causeOf GATA3,induction
R743 T930 T928 themeOf IL-4,induction
R744 T931 T927 themeOf IL-5,induction
R745 T932 T929 themeOf IL-13,induction

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T1587 44-49 P23771 denotes GATA3
T1588 137-141 P05112 denotes IL-4
T1589 143-147 P05113 denotes IL-5
T1590 152-157 P35225 denotes IL-13

test2

Id Subject Object Predicate Lexical cue
T872 44-49 Protein denotes GATA3
T873 124-133 Positive_regulation denotes induction
T874 137-141 Protein denotes IL-4
T875 143-147 Protein denotes IL-5
T876 152-157 Protein denotes IL-13
R715 T874 T873 themeOf IL-4,induction
R716 T875 T873 themeOf IL-5,induction
R717 T876 T873 themeOf IL-13,induction