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PMC:2222968 / 3557-3729 JSONTXT

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2_test

Id Subject Object Predicate Lexical cue
18162042-10626890-84704997 57-58 10626890 denotes 1
18162042-9846495-84704998 59-60 9846495 denotes 2
18162042-16467870-84704999 110-111 16467870 denotes 3
T91765 57-58 10626890 denotes 1
T15814 59-60 9846495 denotes 2
T97197 110-111 16467870 denotes 3

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T1122 8-12 IN denotes into
T1123 13-16 NN denotes Th1
T1124 17-22 NN denotes cells
T1125 23-25 IN denotes in
T1126 26-29 DT denotes the
T1127 30-35 JJ denotes early
T1128 36-41 NN denotes phase
T1129 42-44 IN denotes of
T1130 45-55 NN denotes commitment
T1131 56-57 -LRB- denotes [
T1132 57-60 CD denotes 1,2
T1133 60-61 -RRB- denotes ]
T1134 63-68 NN denotes GATA3
T1135 69-71 VB denotes is
T1136 72-82 JJ denotes sufficient
T1137 83-85 TO denotes to
T1138 86-92 VB denotes induce
T1139 93-94 DT denotes a
T1140 95-98 NN denotes Th2
T1141 99-108 NN denotes phenotype
T1142 109-110 -LRB- denotes [
T1143 110-111 CD denotes 3
T1144 111-112 -RRB- denotes ]
T1145 113-116 CC denotes and
T1146 117-121 VB denotes acts
T1147 122-125 RB denotes not
T1148 126-130 RB denotes only
T1149 131-138 IN denotes through
T1150 139-142 DT denotes the
T1151 143-152 NN denotes induction
T1152 153-155 IN denotes of
T1153 156-160 NN denotes IL-4
T1154 160-161 -COMMA- denotes ,
T1155 162-166 NN denotes IL-5
T1156 167-170 CC denotes and
R887 T1124 T1122 arg2Of cells,into
R888 T1124 T1123 arg1Of cells,Th1
R889 T1128 T1125 arg2Of phase,in
R890 T1128 T1126 arg1Of phase,the
R891 T1128 T1127 arg1Of phase,early
R892 T1128 T1129 arg1Of phase,of
R893 T1130 T1129 arg2Of commitment,of
R894 T1130 T1131 arg1Of commitment,[
R895 T1132 T1131 arg2Of "1,2",[
R896 T1133 T1131 arg3Of ],[
R897 T1134 T1135 arg1Of GATA3,is
R898 T1134 T1136 arg1Of GATA3,sufficient
R899 T1134 T1138 arg1Of GATA3,induce
R900 T1134 T1146 arg1Of GATA3,acts
R901 T1135 T1145 arg1Of is,and
R902 T1136 T1135 arg2Of sufficient,is
R903 T1138 T1136 arg2Of induce,sufficient
R904 T1138 T1137 arg1Of induce,to
R905 T1138 T1142 arg1Of induce,[
R906 T1141 T1138 arg2Of phenotype,induce
R907 T1141 T1139 arg1Of phenotype,a
R908 T1141 T1140 arg1Of phenotype,Th2
R909 T1143 T1142 arg2Of 3,[
R910 T1144 T1142 arg3Of ],[
R911 T1146 T1145 arg2Of acts,and
R912 T1146 T1149 arg1Of acts,through
R914 T1148 T1147 arg1Of only,not
R916 T1151 T1149 arg2Of induction,through
R917 T1151 T1150 arg1Of induction,the
R918 T1151 T1152 arg1Of induction,of
R919 T1153 T1154 arg1Of IL-4,","
R920 T1154 T1156 arg1Of ",",and
R921 T1155 T1154 arg2Of IL-5,","
R922 T1156 T1152 arg2Of and,of

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T1749 8-12 IN denotes into
T1750 13-16 JJ denotes Th1
T1751 17-22 NNS denotes cells
T1752 23-25 IN denotes in
T1753 26-29 DT denotes the
T1754 30-35 JJ denotes early
T1755 36-41 NN denotes phase
T1756 42-44 IN denotes of
T1757 45-55 NN denotes commitment
T1758 56-57 NNP denotes [
T1759 57-60 CD denotes 1,2
T1760 60-61 NNP denotes ]
T1761 61-62 . denotes .
T1762 63-68 CD denotes GATA3
T1763 69-71 VBZ denotes is
T1764 72-82 JJ denotes sufficient
T1765 83-85 TO denotes to
T1766 86-92 VB denotes induce
T1767 93-94 DT denotes a
T1768 95-98 JJ denotes Th2
T1769 99-108 NN denotes phenotype
T1770 109-110 NN denotes [
T1771 110-111 CD denotes 3
T1772 111-112 NNP denotes ]
T1773 113-116 CC denotes and
T1774 117-121 VBZ denotes acts
T1775 122-125 RB denotes not
T1776 126-130 RB denotes only
T1777 131-138 IN denotes through
T1778 139-142 DT denotes the
T1779 143-152 NN denotes induction
T1780 153-155 IN denotes of
T1781 156-160 NN denotes IL-4
T1782 160-161 , denotes ,
T1783 162-166 NN denotes IL-5
T1784 167-170 CC denotes and
R1490 T1750 T1751 amod Th1,cells
R1491 T1751 T1749 pobj cells,into
R1493 T1753 T1755 det the,phase
R1494 T1754 T1755 amod early,phase
R1495 T1755 T1752 pobj phase,in
R1496 T1756 T1755 prep of,phase
R1497 T1757 T1756 pobj commitment,of
R1498 T1758 T1760 compound [,]
R1499 T1759 T1760 compound "1,2",]
R1500 T1760 T1760 ROOT ],]
R1502 T1762 T1763 nsubj GATA3,is
R1503 T1763 T1763 ROOT is,is
R1504 T1764 T1763 acomp sufficient,is
R1505 T1765 T1766 aux to,induce
R1506 T1766 T1764 xcomp induce,sufficient
R1507 T1767 T1774 det a,acts
R1508 T1768 T1770 amod Th2,[
R1509 T1769 T1770 compound phenotype,[
R1510 T1770 T1774 nummod [,acts
R1511 T1771 T1770 nummod 3,[
R1512 T1772 T1770 appos ],[
R1513 T1773 T1770 cc and,[
R1514 T1774 T1766 dobj acts,induce
R1515 T1775 T1777 preconj not,through
R1516 T1776 T1775 advmod only,not
R1517 T1777 T1774 prep through,acts
R1518 T1778 T1779 det the,induction
R1519 T1779 T1777 pobj induction,through
R1520 T1780 T1779 prep of,induction
R1521 T1781 T1780 pobj IL-4,of
R1522 T1782 T1781 punct ",",IL-4
R1523 T1783 T1781 conj IL-5,IL-4
R1524 T1784 T1783 cc and,IL-5

GO-MF

Id Subject Object Predicate Lexical cue
T2282 156-160 http://purl.obolibrary.org/obo/GO_0005136 denotes IL-4
T2285 162-166 http://purl.obolibrary.org/obo/GO_0005137 denotes IL-5

events-check-again

Id Subject Object Predicate Lexical cue
T2523 63-68 Protein denotes GATA3
T2524 143-152 Positive_regulation denotes induction
T2525 143-152 Positive_regulation denotes induction
T2526 143-152 Positive_regulation denotes induction
T2527 156-160 Protein denotes IL-4
T2528 162-166 Protein denotes IL-5
R2121 T2523 T2524 causeOf GATA3,induction
R2122 T2523 T2526 causeOf GATA3,induction
R2123 T2523 T2525 causeOf GATA3,induction
R2125 T2527 T2525 themeOf IL-4,induction
R2126 T2528 T2524 themeOf IL-5,induction

bionlp-st-ge-2016-reference-tees

Id Subject Object Predicate Lexical cue
T2309 63-68 Protein denotes GATA3
T2310 156-160 Protein denotes IL-4
T2311 162-166 Protein denotes IL-5
T2314 143-152 Positive_regulation denotes induction
T2315 143-152 Positive_regulation denotes induction
T2316 143-152 Positive_regulation denotes induction
R2005 T2309 T2314 causeOf GATA3,induction
R2006 T2309 T2315 causeOf GATA3,induction
R2007 T2309 T2316 causeOf GATA3,induction
R2009 T2310 T2314 themeOf IL-4,induction
R2011 T2311 T2315 themeOf IL-5,induction

bionlp-st-ge-2016-reference

Id Subject Object Predicate Lexical cue
T926 63-68 Protein denotes GATA3
T927 143-152 Positive_regulation denotes induction
T928 143-152 Positive_regulation denotes induction
T929 143-152 Positive_regulation denotes induction
T930 156-160 Protein denotes IL-4
T931 162-166 Protein denotes IL-5
R740 T926 T927 causeOf GATA3,induction
R741 T926 T929 causeOf GATA3,induction
R742 T926 T928 causeOf GATA3,induction
R743 T930 T928 themeOf IL-4,induction
R744 T931 T927 themeOf IL-5,induction

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T1587 63-68 P23771 denotes GATA3
T1588 156-160 P05112 denotes IL-4
T1589 162-166 P05113 denotes IL-5

test2

Id Subject Object Predicate Lexical cue
T872 63-68 Protein denotes GATA3
T873 143-152 Positive_regulation denotes induction
T874 156-160 Protein denotes IL-4
T875 162-166 Protein denotes IL-5
R715 T874 T873 themeOf IL-4,induction
R716 T875 T873 themeOf IL-5,induction