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PMC:2222968 / 31521-31660 JSONTXT

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pmc-enju-pas

Id Subject Object Predicate Lexical cue
T14372 0-2 IN denotes In
T14373 3-7 NN denotes fact
T14374 7-8 -COMMA- denotes ,
T14375 9-23 JJ denotes GATA3-inducing
T14376 24-28 NN denotes IL-4
T14377 29-43 NN denotes concentrations
T14378 44-53 VB denotes repressed
T14379 54-68 JJ denotes TGF-β–mediated
T14380 69-74 NN denotes FOXP3
T14381 75-85 NN denotes expression
T14382 85-86 -COMMA- denotes ,
T14383 87-94 IN denotes whereas
T14384 95-99 NN denotes IL-4
T14385 100-102 RB denotes as
T14386 103-107 RB denotes well
T14387 108-110 IN denotes as
T14388 111-116 NN denotes TGF-β
T14389 117-126 NN denotes signaling
T14390 127-131 VB denotes were
T14391 132-138 JJ denotes intact
R10782 T14373 T14372 arg2Of fact,In
R10783 T14377 T14375 arg1Of concentrations,GATA3-inducing
R10784 T14377 T14376 arg1Of concentrations,IL-4
R10785 T14377 T14378 arg1Of concentrations,repressed
R10786 T14378 T14372 arg1Of repressed,In
R10787 T14378 T14374 arg1Of repressed,","
R10788 T14378 T14382 arg1Of repressed,","
R10789 T14378 T14383 arg1Of repressed,whereas
R10790 T14381 T14378 arg2Of expression,repressed
R10791 T14381 T14379 arg1Of expression,TGF-β–mediated
R10792 T14381 T14380 arg1Of expression,FOXP3
R10793 T14384 T14387 arg1Of IL-4,as
R10794 T14387 T14385 arg1Of as,as
R10795 T14387 T14386 arg1Of as,well
R10796 T14387 T14390 arg1Of as,were
R10797 T14387 T14391 arg1Of as,intact
R10798 T14389 T14387 arg2Of signaling,as
R10799 T14389 T14388 arg1Of signaling,TGF-β
R10800 T14390 T14383 arg2Of were,whereas
R10801 T14391 T14390 arg2Of intact,were

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T15852 0-2 IN denotes In
T15853 3-7 NN denotes fact
T15854 7-8 , denotes ,
T15855 9-23 VBG denotes GATA3-inducing
T15856 24-28 NN denotes IL-4
T15857 29-43 NNS denotes concentrations
T15858 44-53 VBD denotes repressed
T15859 54-59 NNP denotes TGF-β
T15860 60-68 VBD denotes mediated
T15861 69-74 CD denotes FOXP3
T15862 75-85 NN denotes expression
T15863 85-86 , denotes ,
T15864 87-94 IN denotes whereas
T15865 95-99 NN denotes IL-4
T15866 100-102 RB denotes as
T15867 103-107 RB denotes well
T15868 108-110 IN denotes as
T15869 111-116 JJ denotes TGF-β
T15870 117-126 VBG denotes signaling
T15871 127-131 VBD denotes were
T15872 132-138 JJ denotes intact
T15873 138-139 . denotes .
R12127 T15852 T15858 prep In,repressed
R12128 T15853 T15852 pobj fact,In
R12129 T15854 T15858 punct ",",repressed
R12131 T15855 T15857 amod GATA3-inducing,concentrations
R12132 T15856 T15857 compound IL-4,concentrations
R12133 T15857 T15858 nsubj concentrations,repressed
R12135 T15858 T15858 ROOT repressed,repressed
R12136 T15859 T15858 dobj TGF-β,repressed
R12138 T15860 T15858 conj mediated,repressed
R12139 T15861 T15862 nummod FOXP3,expression
R12140 T15862 T15860 dobj expression,mediated
R12142 T15863 T15860 punct ",",mediated
R12143 T15864 T15871 mark whereas,were
R12144 T15865 T15871 nsubj IL-4,were
R12146 T15866 T15868 advmod as,as
R12147 T15867 T15868 advmod well,as
R12150 T15868 T15865 cc as,IL-4
R12151 T15869 T15865 conj TGF-β,IL-4
R12153 T15870 T15865 conj signaling,IL-4
R12154 T15871 T15860 advcl were,mediated
R12155 T15872 T15871 acomp intact,were
R12156 T15873 T15858 punct .,repressed

GO-BP

Id Subject Object Predicate Lexical cue
T13484 117-126 http://purl.obolibrary.org/obo/GO_0023052 denotes signaling

GO-MF

Id Subject Object Predicate Lexical cue
T16701 24-28 http://purl.obolibrary.org/obo/GO_0005136 denotes IL-4
T16702 95-99 http://purl.obolibrary.org/obo/GO_0005136 denotes IL-4

sentences

Id Subject Object Predicate Lexical cue
T13457 0-139 Sentence denotes In fact, GATA3-inducing IL-4 concentrations repressed TGF-β–mediated FOXP3 expression, whereas IL-4 as well as TGF-β signaling were intact.
T234 0-139 Sentence denotes In fact, GATA3-inducing IL-4 concentrations repressed TGF-β–mediated FOXP3 expression, whereas IL-4 as well as TGF-β signaling were intact.

events-check-again

Id Subject Object Predicate Lexical cue
T17453 9-14 Protein denotes GATA3
T17454 15-23 Positive_regulation denotes inducing
T17455 24-28 Protein denotes IL-4
T17456 44-53 Negative_regulation denotes repressed
T17457 54-59 Protein denotes TGF-β
T17458 60-68 Positive_regulation denotes mediated
T17459 69-74 Protein denotes FOXP3
T17460 75-85 Gene_expression denotes expression
T17461 95-99 Protein denotes IL-4
T17462 111-116 Protein denotes TGF-β
R13213 T17455 T17454 themeOf IL-4,inducing
R13214 T17457 T17458 causeOf TGF-β,mediated
R13218 T17458 T17456 themeOf mediated,repressed
R13221 T17459 T17460 themeOf FOXP3,expression
R13224 T17460 T17458 themeOf expression,mediated
R13249 T17453 T17454 causeOf GATA3,inducing
R13250 T17454 T17456 causeOf inducing,repressed

bionlp-st-ge-2016-reference

Id Subject Object Predicate Lexical cue
T13540 15-23 Positive_regulation denotes inducing
T13541 44-53 Negative_regulation denotes repressed
T13543 60-68 Positive_regulation denotes mediated
T13544 75-85 Gene_expression denotes expression
T13668 9-14 Protein denotes GATA3
T13669 24-28 Protein denotes IL-4
T13671 69-74 Protein denotes FOXP3
T13672 95-99 Protein denotes IL-4
T13673 111-116 Protein denotes TGF-β
T13703 54-59 Protein denotes TGF-β
R9974 T13540 T13541 causeOf inducing,repressed
R9975 T13543 T13541 themeOf mediated,repressed
R9976 T13544 T13543 themeOf expression,mediated
R10061 T13668 T13540 causeOf GATA3,inducing
R10062 T13669 T13540 themeOf IL-4,inducing
R10064 T13671 T13544 themeOf FOXP3,expression
R10079 T13703 T13543 causeOf TGF-β,mediated

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T15044 9-14 P23771 denotes GATA3
T15045 24-28 P05112 denotes IL-4
T15046 54-59 P01137 denotes TGF-β
T15047 69-74 Q9BZS1 denotes FOXP3
T15048 95-99 P05112 denotes IL-4
T15049 111-116 P01137 denotes TGF-β

test2

Id Subject Object Predicate Lexical cue
T13334 9-14 Protein denotes GATA3
T13335 15-23 Positive_regulation denotes inducing
T13336 24-28 Protein denotes IL-4
T13337 44-53 Negative_regulation denotes repressed
T13338 54-59 Protein denotes TGF-β
T13339 60-68 Positive_regulation denotes mediated
T13340 69-74 Protein denotes FOXP3
T13341 75-85 Gene_expression denotes expression
T13342 95-99 Protein denotes IL-4
T13343 111-116 Protein denotes TGF-β
R9912 T13334 T13337 causeOf GATA3,repressed
R9913 T13334 T13335 causeOf GATA3,inducing
R9914 T13336 T13335 themeOf IL-4,inducing
R9915 T13339 T13337 themeOf mediated,repressed
R9916 T13340 T13341 themeOf FOXP3,expression
R9917 T13341 T13339 themeOf expression,mediated