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PMC:2222968 / 23989-24190 JSONTXT

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2_test

Id Subject Object Predicate Lexical cue
18162042-8083467-84705026 152-154 8083467 denotes 25
18162042-7654359-84705027 155-157 7654359 denotes 26
T74593 152-154 8083467 denotes 25
T43549 155-157 7654359 denotes 26

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T11691 0-2 PRP denotes We
T11692 3-14 VB denotes transfected
T11693 15-20 JJ denotes human
T11694 21-28 JJ denotes primary
T11695 29-33 JJ denotes CD4+
T11696 34-35 NN denotes T
T11697 36-41 NN denotes cells
T11698 41-42 -COMMA- denotes ,
T11699 43-45 FW denotes in
T11700 46-51 FW denotes vitro
T11701 52-66 VB denotes differentiated
T11702 67-70 NN denotes Th2
T11703 71-76 NN denotes cells
T11704 76-77 -COMMA- denotes ,
T11705 78-81 CC denotes and
T11706 82-88 NN denotes Jurkat
T11707 89-94 NN denotes cells
T11708 95-96 -LRB- denotes (
T11709 96-102 NN denotes Jurkat
T11710 103-108 NN denotes cells
T11711 109-112 VB denotes are
T11712 113-118 VB denotes known
T11713 119-121 TO denotes to
T11714 122-136 RB denotes constitutively
T11715 137-144 VB denotes express
T11716 145-150 NN denotes GATA3
T11717 151-152 -LRB- denotes [
T11718 152-157 CD denotes 25,26
T11719 157-158 -RRB- denotes ]
T11720 158-159 -RRB- denotes )
T11721 159-160 -COMMA- denotes ,
T11722 161-164 CC denotes and
T11723 165-167 PRP denotes we
T11724 168-176 VB denotes measured
T11725 177-182 NN denotes FOXP3
T11726 183-191 NN denotes promoter
T11727 192-200 NN denotes activity
R8714 T11691 T11692 arg1Of We,transfected
R8715 T11692 T11722 arg1Of transfected,and
R8716 T11697 T11693 arg1Of cells,human
R8717 T11697 T11694 arg1Of cells,primary
R8718 T11697 T11695 arg1Of cells,CD4+
R8719 T11697 T11696 arg1Of cells,T
R8720 T11697 T11698 arg1Of cells,","
R8721 T11698 T11705 arg1Of ",",and
R8722 T11700 T11699 arg1Of vitro,in
R8723 T11703 T11698 arg2Of cells,","
R8724 T11703 T11700 arg1Of cells,vitro
R8725 T11703 T11701 arg2Of cells,differentiated
R8726 T11703 T11702 arg1Of cells,Th2
R8727 T11705 T11692 arg2Of and,transfected
R8728 T11705 T11704 arg1Of and,","
R8729 T11707 T11705 arg2Of cells,and
R8730 T11707 T11706 arg1Of cells,Jurkat
R8731 T11707 T11708 arg1Of cells,(
R8732 T11710 T11709 arg1Of cells,Jurkat
R8733 T11710 T11711 arg1Of cells,are
R8734 T11710 T11712 arg2Of cells,known
R8735 T11710 T11715 arg1Of cells,express
R8736 T11712 T11708 arg2Of known,(
R8737 T11712 T11711 arg2Of known,are
R8738 T11715 T11712 arg3Of express,known
R8739 T11715 T11713 arg1Of express,to
R8740 T11715 T11714 arg1Of express,constitutively
R8741 T11715 T11717 arg1Of express,[
R8742 T11716 T11715 arg2Of GATA3,express
R8743 T11718 T11717 arg2Of "25,26",[
R8744 T11719 T11717 arg3Of ],[
R8745 T11720 T11708 arg3Of ),(
R8746 T11722 T11721 arg1Of and,","
R8747 T11723 T11724 arg1Of we,measured
R8748 T11724 T11722 arg2Of measured,and
R8749 T11727 T11724 arg2Of activity,measured
R8750 T11727 T11725 arg1Of activity,FOXP3
R8751 T11727 T11726 arg1Of activity,promoter

bionlp-st-ge-2016-coref

Id Subject Object Predicate Lexical cue
T12016 183-191 Antecedent denotes promoter

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T12176 0-2 PRP denotes We
T12177 3-14 VBD denotes transfected
T12178 15-20 JJ denotes human
T12179 21-28 JJ denotes primary
T12180 29-32 NNP denotes CD4
T12181 32-33 CD denotes +
T12182 34-35 NNP denotes T
T12183 36-41 NNS denotes cells
T12184 41-42 , denotes ,
T12185 43-45 IN denotes in
T12186 46-51 NN denotes vitro
T12187 52-66 VBD denotes differentiated
T12188 67-70 JJ denotes Th2
T12189 71-76 NNS denotes cells
T12190 76-77 , denotes ,
T12191 78-81 CC denotes and
T12192 82-88 NNP denotes Jurkat
T12193 89-94 NNS denotes cells
T12194 95-96 -LRB- denotes (
T12195 96-102 NNP denotes Jurkat
T12196 103-108 NNS denotes cells
T12197 109-112 VBP denotes are
T12198 113-118 VBN denotes known
T12199 119-121 TO denotes to
T12200 122-136 RB denotes constitutively
T12201 137-144 VB denotes express
T12202 145-150 NNP denotes GATA3
T12203 151-152 NNP denotes [
T12204 152-157 CD denotes 25,26
T12205 157-158 NNP denotes ]
T12206 158-159 -RRB- denotes )
T12207 159-160 , denotes ,
T12208 161-164 CC denotes and
T12209 165-167 PRP denotes we
T12210 168-176 VBD denotes measured
T12211 177-182 CD denotes FOXP3
T12212 183-191 NN denotes promoter
T12213 192-200 NN denotes activity
T12214 200-201 . denotes .
R9138 T12176 T12177 nsubj We,transfected
R9139 T12177 T12177 ROOT transfected,transfected
R9140 T12178 T12183 amod human,cells
R9141 T12179 T12183 amod primary,cells
R9142 T12180 T12183 compound CD4,cells
R9143 T12181 T12183 nummod +,cells
R9144 T12182 T12183 compound T,cells
R9145 T12183 T12177 dobj cells,transfected
R9146 T12184 T12177 punct ",",transfected
R9147 T12185 T12177 prep in,transfected
R9148 T12186 T12189 amod vitro,cells
R9149 T12187 T12189 amod differentiated,cells
R9150 T12188 T12189 amod Th2,cells
R9151 T12189 T12185 pobj cells,in
R9152 T12190 T12177 punct ",",transfected
R9153 T12191 T12177 cc and,transfected
R9154 T12192 T12193 compound Jurkat,cells
R9155 T12193 T12177 conj cells,transfected
R9156 T12194 T12198 punct (,known
R9157 T12195 T12196 compound Jurkat,cells
R9158 T12196 T12198 nsubjpass cells,known
R9159 T12197 T12198 auxpass are,known
R9160 T12198 T12193 relcl known,cells
R9161 T12199 T12201 aux to,express
R9162 T12200 T12201 advmod constitutively,express
R9163 T12201 T12198 xcomp express,known
R9164 T12202 T12203 compound GATA3,[
R9165 T12203 T12201 dobj [,express
R9166 T12204 T12205 nummod "25,26",]
R9167 T12205 T12203 appos ],[
R9168 T12206 T12203 punct ),[
R9169 T12207 T12198 punct ",",known
R9170 T12208 T12177 cc and,transfected
R9171 T12209 T12210 nsubj we,measured
R9172 T12210 T12177 conj measured,transfected
R9173 T12211 T12213 nummod FOXP3,activity
R9174 T12212 T12213 compound promoter,activity
R9175 T12213 T12210 dobj activity,measured
R9176 T12214 T12210 punct .,measured

GO-CC

Id Subject Object Predicate Lexical cue
T12604 36-41 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T12605 71-76 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T12606 89-94 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T12607 103-108 http://purl.obolibrary.org/obo/GO_0005623 denotes cells

sentences

Id Subject Object Predicate Lexical cue
T11573 0-201 Sentence denotes We transfected human primary CD4+ T cells, in vitro differentiated Th2 cells, and Jurkat cells (Jurkat cells are known to constitutively express GATA3 [25,26]), and we measured FOXP3 promoter activity.
T181 0-201 Sentence denotes We transfected human primary CD4+ T cells, in vitro differentiated Th2 cells, and Jurkat cells (Jurkat cells are known to constitutively express GATA3 [25,26]), and we measured FOXP3 promoter activity.

events-check-again

Id Subject Object Predicate Lexical cue
T12901 29-32 Protein denotes CD4
T12902 137-144 Gene_expression denotes express
T12903 145-150 Protein denotes GATA3
T12904 177-182 Protein denotes FOXP3
T12905 183-191 Entity denotes promoter
R9665 T12903 T12902 themeOf GATA3,express
R9667 T12905 T12904 partOf promoter,FOXP3

bionlp-st-ge-2016-reference-tees

Id Subject Object Predicate Lexical cue
T12635 29-33 Protein denotes CD4+
T12636 177-191 Protein denotes FOXP3 promoter

bionlp-st-ge-2016-reference

Id Subject Object Predicate Lexical cue
T11514 29-32 Protein denotes CD4
T11515 137-144 Gene_expression denotes express
T11516 145-150 Protein denotes GATA3
T11517 177-182 Protein denotes FOXP3
T11518 183-191 Entity denotes promoter
R8590 T11516 T11515 themeOf GATA3,express
R8592 T11518 T11517 partOf promoter,FOXP3

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T12025 29-32 P01730 denotes CD4
T12026 145-150 P23771 denotes GATA3
T12027 177-182 Q9BZS1 denotes FOXP3

test2

Id Subject Object Predicate Lexical cue
T11443 29-32 Protein denotes CD4
T11444 137-144 Gene_expression denotes express
T11445 145-150 Protein denotes GATA3
T11446 177-182 Protein denotes FOXP3
T11447 183-191 Entity denotes promoter
R8554 T11445 T11444 themeOf GATA3,express
R8555 T11447 T11446 partOf promoter,FOXP3