PMC:2222968 / 19625-20016 JSONTXT

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    pmc-enju-pas

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    bionlp-st-ge-2016-coref

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    bionlp-st-ge-2016-spacy-parsed

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    GO-BP

    {"project":"GO-BP","denotations":[{"id":"T8277","span":{"begin":344,"end":355},"obj":"http://purl.obolibrary.org/obo/GO_0032502"}],"text":"The expression kinetic of naive T cells exposed to IL-4 and TGF-β demonstrated that GATA3 and FOXP3 are initially found in separate populations (day 2), but transiently co-express both factors (days 4–8), before establishing separate populations at the end of the differentiation process (day 10; Figure 6C), suggesting that GATA3 inhibits the development of iTreg cells by repressing FOXP3."}

    GO-MF

    {"project":"GO-MF","denotations":[{"id":"T9223","span":{"begin":51,"end":55},"obj":"http://purl.obolibrary.org/obo/GO_0005136"}],"text":"The expression kinetic of naive T cells exposed to IL-4 and TGF-β demonstrated that GATA3 and FOXP3 are initially found in separate populations (day 2), but transiently co-express both factors (days 4–8), before establishing separate populations at the end of the differentiation process (day 10; Figure 6C), suggesting that GATA3 inhibits the development of iTreg cells by repressing FOXP3."}

    GO-CC

    {"project":"GO-CC","denotations":[{"id":"T9239","span":{"begin":34,"end":39},"obj":"http://purl.obolibrary.org/obo/GO_0005623"},{"id":"T9240","span":{"begin":365,"end":370},"obj":"http://purl.obolibrary.org/obo/GO_0005623"}],"text":"The expression kinetic of naive T cells exposed to IL-4 and TGF-β demonstrated that GATA3 and FOXP3 are initially found in separate populations (day 2), but transiently co-express both factors (days 4–8), before establishing separate populations at the end of the differentiation process (day 10; Figure 6C), suggesting that GATA3 inhibits the development of iTreg cells by repressing FOXP3."}

    sentences

    {"project":"sentences","denotations":[{"id":"T8271","span":{"begin":0,"end":391},"obj":"Sentence"},{"id":"T149","span":{"begin":0,"end":391},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"The expression kinetic of naive T cells exposed to IL-4 and TGF-β demonstrated that GATA3 and FOXP3 are initially found in separate populations (day 2), but transiently co-express both factors (days 4–8), before establishing separate populations at the end of the differentiation process (day 10; Figure 6C), suggesting that GATA3 inhibits the development of iTreg cells by repressing FOXP3."}

    events-check-again

    {"project":"events-check-again","denotations":[{"id":"T9486","span":{"begin":51,"end":55},"obj":"Protein"},{"id":"T9487","span":{"begin":60,"end":65},"obj":"Protein"},{"id":"T9488","span":{"begin":66,"end":78},"obj":"Positive_regulation"},{"id":"T9489","span":{"begin":66,"end":78},"obj":"Positive_regulation"},{"id":"T9490","span":{"begin":66,"end":78},"obj":"Positive_regulation"},{"id":"T9491","span":{"begin":66,"end":78},"obj":"Positive_regulation"},{"id":"T9492","span":{"begin":84,"end":89},"obj":"Protein"},{"id":"T9493","span":{"begin":94,"end":99},"obj":"Protein"},{"id":"T9494","span":{"begin":169,"end":179},"obj":"Gene_expression"},{"id":"T9495","span":{"begin":169,"end":179},"obj":"Gene_expression"},{"id":"T9496","span":{"begin":325,"end":330},"obj":"Protein"},{"id":"T9497","span":{"begin":374,"end":384},"obj":"Negative_regulation"},{"id":"T9498","span":{"begin":385,"end":390},"obj":"Protein"}],"relations":[{"id":"R7232","pred":"causeOf","subj":"T9486","obj":"T9488"},{"id":"R7233","pred":"causeOf","subj":"T9486","obj":"T9490"},{"id":"R7234","pred":"causeOf","subj":"T9487","obj":"T9489"},{"id":"R7235","pred":"causeOf","subj":"T9487","obj":"T9491"},{"id":"R7236","pred":"themeOf","subj":"T9492","obj":"T9494"},{"id":"R7237","pred":"themeOf","subj":"T9493","obj":"T9495"},{"id":"R7238","pred":"themeOf","subj":"T9494","obj":"T9488"},{"id":"R7239","pred":"themeOf","subj":"T9494","obj":"T9489"},{"id":"R7240","pred":"themeOf","subj":"T9495","obj":"T9490"},{"id":"R7241","pred":"themeOf","subj":"T9495","obj":"T9491"},{"id":"R7242","pred":"causeOf","subj":"T9496","obj":"T9497"},{"id":"R7243","pred":"themeOf","subj":"T9498","obj":"T9497"}],"attributes":[{"id":"M250","pred":"Speculation","subj":"T9497","obj":"true"}],"text":"The expression kinetic of naive T cells exposed to IL-4 and TGF-β demonstrated that GATA3 and FOXP3 are initially found in separate populations (day 2), but transiently co-express both factors (days 4–8), before establishing separate populations at the end of the differentiation process (day 10; Figure 6C), suggesting that GATA3 inhibits the development of iTreg cells by repressing FOXP3."}

    bionlp-st-ge-2016-reference

    {"project":"bionlp-st-ge-2016-reference","denotations":[{"id":"T8289","span":{"begin":66,"end":78},"obj":"Positive_regulation"},{"id":"T8290","span":{"begin":169,"end":179},"obj":"Gene_expression"},{"id":"T8292","span":{"begin":66,"end":78},"obj":"Positive_regulation"},{"id":"T8293","span":{"begin":66,"end":78},"obj":"Positive_regulation"},{"id":"T8294","span":{"begin":169,"end":179},"obj":"Gene_expression"},{"id":"T8295","span":{"begin":66,"end":78},"obj":"Positive_regulation"},{"id":"T8296","span":{"begin":374,"end":384},"obj":"Negative_regulation"},{"id":"T8339","span":{"begin":325,"end":330},"obj":"Protein"},{"id":"T8341","span":{"begin":385,"end":390},"obj":"Protein"},{"id":"T8335","span":{"begin":51,"end":55},"obj":"Protein"},{"id":"T8336","span":{"begin":60,"end":65},"obj":"Protein"},{"id":"T8337","span":{"begin":84,"end":89},"obj":"Protein"},{"id":"T8338","span":{"begin":94,"end":99},"obj":"Protein"}],"relations":[{"id":"R6280","pred":"themeOf","subj":"T8290","obj":"T8289"},{"id":"R6281","pred":"themeOf","subj":"T8290","obj":"T8292"},{"id":"R6283","pred":"themeOf","subj":"T8294","obj":"T8293"},{"id":"R6284","pred":"themeOf","subj":"T8294","obj":"T8295"},{"id":"R6302","pred":"causeOf","subj":"T8335","obj":"T8289"},{"id":"R6303","pred":"causeOf","subj":"T8335","obj":"T8293"},{"id":"R6304","pred":"causeOf","subj":"T8336","obj":"T8292"},{"id":"R6305","pred":"causeOf","subj":"T8336","obj":"T8295"},{"id":"R6306","pred":"themeOf","subj":"T8337","obj":"T8290"},{"id":"R6307","pred":"themeOf","subj":"T8338","obj":"T8294"},{"id":"R6308","pred":"causeOf","subj":"T8339","obj":"T8296"},{"id":"R6310","pred":"themeOf","subj":"T8341","obj":"T8296"}],"attributes":[{"id":"M229","pred":"Speculation","subj":"T8296","obj":"true"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}],"text":"The expression kinetic of naive T cells exposed to IL-4 and TGF-β demonstrated that GATA3 and FOXP3 are initially found in separate populations (day 2), but transiently co-express both factors (days 4–8), before establishing separate populations at the end of the differentiation process (day 10; Figure 6C), suggesting that GATA3 inhibits the development of iTreg cells by repressing FOXP3."}

    bionlp-st-ge-2016-uniprot

    {"project":"bionlp-st-ge-2016-uniprot","denotations":[{"id":"T8742","span":{"begin":51,"end":55},"obj":"P05112"},{"id":"T8743","span":{"begin":60,"end":65},"obj":"P01137"},{"id":"T8744","span":{"begin":84,"end":89},"obj":"P23771"},{"id":"T8745","span":{"begin":94,"end":99},"obj":"Q9BZS1"},{"id":"T8746","span":{"begin":325,"end":330},"obj":"P23771"},{"id":"T8747","span":{"begin":385,"end":390},"obj":"Q9BZS1"}],"namespaces":[{"prefix":"_base","uri":"http://www.uniprot.org/uniprot/"}],"text":"The expression kinetic of naive T cells exposed to IL-4 and TGF-β demonstrated that GATA3 and FOXP3 are initially found in separate populations (day 2), but transiently co-express both factors (days 4–8), before establishing separate populations at the end of the differentiation process (day 10; Figure 6C), suggesting that GATA3 inhibits the development of iTreg cells by repressing FOXP3."}

    test2

    {"project":"test2","denotations":[{"id":"T8245","span":{"begin":51,"end":55},"obj":"Protein"},{"id":"T8246","span":{"begin":60,"end":65},"obj":"Protein"},{"id":"T8247","span":{"begin":84,"end":89},"obj":"Protein"},{"id":"T8248","span":{"begin":94,"end":99},"obj":"Protein"},{"id":"T8249","span":{"begin":169,"end":179},"obj":"Gene_expression"},{"id":"T8250","span":{"begin":325,"end":330},"obj":"Protein"},{"id":"T8251","span":{"begin":374,"end":384},"obj":"Negative_regulation"},{"id":"T8252","span":{"begin":385,"end":390},"obj":"Protein"}],"relations":[{"id":"R6270","pred":"themeOf","subj":"T8247","obj":"T8249"},{"id":"R6271","pred":"themeOf","subj":"T8248","obj":"T8249"},{"id":"R6272","pred":"causeOf","subj":"T8250","obj":"T8251"},{"id":"R6273","pred":"themeOf","subj":"T8250","obj":"T8249"},{"id":"R6274","pred":"themeOf","subj":"T8252","obj":"T8251"}],"text":"The expression kinetic of naive T cells exposed to IL-4 and TGF-β demonstrated that GATA3 and FOXP3 are initially found in separate populations (day 2), but transiently co-express both factors (days 4–8), before establishing separate populations at the end of the differentiation process (day 10; Figure 6C), suggesting that GATA3 inhibits the development of iTreg cells by repressing FOXP3."}