PMC:2222968 / 18954-19219
Annnotations
pmc-enju-pas
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T25930 | 0-11 | JJ | denotes | Statistical |
| T25931 | 12-24 | NN | denotes | significance |
| T25932 | 25-26 | -LRB- | denotes | ( |
| T25933 | 26-33 | JJ | denotes | one-way |
| T25934 | 34-39 | NNP | denotes | Anova |
| T25935 | 39-40 | -COMMA- | denotes | , |
| T25936 | 41-53 | NNP | denotes | Newman-Keuls |
| T25937 | 53-54 | -RRB- | denotes | ) |
| T25938 | 55-57 | VB | denotes | is |
| T25939 | 58-67 | VB | denotes | indicated |
| T25940 | 68-70 | IN | denotes | by |
| T25941 | 71-80 | NN | denotes | asterisks |
| T25942 | 81-82 | -LRB- | denotes | ( |
| T25943 | 82-85 | NN | denotes | **p |
| T25944 | 86-87 | SYM | denotes | ≤ |
| T25945 | 88-92 | CD | denotes | 0.01 |
| T25946 | 92-93 | -COMMA- | denotes | , |
| T25947 | 94-98 | NN | denotes | ***p |
| T25948 | 99-100 | -COLON- | denotes | ≤ |
| T25949 | 101-106 | CD | denotes | 0.001 |
| T25950 | 106-107 | -RRB- | denotes | ) |
| T25951 | 107-108 | -LRB- | denotes | . |
| T25952 | 109-110 | NN | denotes | ( |
| T25953 | 110-111 | -RRB- | denotes | C |
| T25954 | 111-118 | JJ | denotes | ) Kinet |
| T25955 | 118-126 | NN | denotes | ic analy |
| T25956 | 126-128 | IN | denotes | si |
| T25957 | 128-141 | JJ | denotes | s of intracel |
| T25958 | 141-146 | NN | denotes | lular |
| T25959 | 147-150 | CC | denotes | GAT |
| T25960 | 150-155 | NN | denotes | A3 an |
| T25961 | 155-163 | NN | denotes | d FOXP3 |
| T25962 | 163-165 | VB | denotes | st |
| T25963 | 165-170 | VB | denotes | ainin |
| T25964 | 170-172 | IN | denotes | g |
| T25965 | 172-177 | NN | denotes | is sh |
| T25966 | 177-178 | NN | denotes | o |
| T25967 | 178-187 | VB | denotes | wn in pan |
| T25968 | 187-195 | NN | denotes | el C fol |
| T25969 | 195-197 | IN | denotes | lo |
| T25970 | 197-208 | JJ | denotes | wing exposu |
| T25971 | 208-209 | NN | denotes | r |
| T25972 | 209-214 | NN | denotes | e of |
| T25973 | 214-216 | TO | denotes | CD |
| T25974 | 216-227 | JJ | denotes | 4+CD45RA+ T |
| T25975 | 228-229 | -COMMA- | denotes | c |
| T25976 | 229-233 | NN | denotes | ells |
| T25977 | 234-237 | CC | denotes | to |
| T25978 | 237-242 | NN | denotes | anti- |
| R19239 | T25931 | T25930 | arg1Of | significance,Statistical |
| R19240 | T25931 | T25932 | arg1Of | significance,( |
| R19241 | T25931 | T25938 | arg1Of | significance,is |
| R19242 | T25931 | T25939 | arg2Of | significance,indicated |
| R19243 | T25934 | T25932 | arg2Of | Anova,( |
| R19244 | T25934 | T25933 | arg1Of | Anova,one-way |
| R19245 | T25934 | T25935 | arg1Of | Anova,"," |
| R19246 | T25934 | T25936 | arg1Of | Anova,Newman-Keuls |
| R19247 | T25937 | T25932 | arg3Of | ),( |
| R19248 | T25939 | T25938 | arg2Of | indicated,is |
| R19249 | T25941 | T25939 | arg1Of | asterisks,indicated |
| R19250 | T25941 | T25940 | arg2Of | asterisks,by |
| R19251 | T25941 | T25942 | arg1Of | asterisks,( |
| R19252 | T25941 | T25962 | modOf | asterisks,st |
| R19253 | T25941 | T25973 | arg1Of | asterisks,CD |
| R19254 | T25943 | T25942 | arg2Of | **p,( |
| R19255 | T25943 | T25944 | arg1Of | **p,≤ |
| R19256 | T25943 | T25945 | arg1Of | **p,0.01 |
| R19257 | T25943 | T25946 | arg1Of | **p,"," |
| R19258 | T25949 | T25946 | arg2Of | 0.001,"," |
| R19259 | T25949 | T25947 | arg1Of | 0.001,***p |
| R19260 | T25949 | T25948 | arg1Of | 0.001,≤ |
| R19261 | T25950 | T25942 | arg3Of | ),( |
| R19262 | T25952 | T25951 | arg2Of | (,. |
| R19263 | T25953 | T25951 | arg3Of | C,. |
| R19264 | T25955 | T25951 | arg1Of | ic analy,. |
| R19265 | T25955 | T25954 | arg1Of | ic analy,) Kinet |
| R19266 | T25955 | T25956 | arg1Of | ic analy,si |
| R19267 | T25955 | T25962 | arg1Of | ic analy,st |
| R19268 | T25955 | T25963 | arg2Of | ic analy,ainin |
| R19269 | T25958 | T25959 | arg1Of | lular,GAT |
| R19270 | T25960 | T25959 | arg2Of | A3 an,GAT |
| R19271 | T25961 | T25956 | arg2Of | d FOXP3 ,si |
| R19272 | T25961 | T25957 | arg1Of | d FOXP3 ,s of intracel |
| R19273 | T25961 | T25958 | arg1Of | d FOXP3 ,lular |
| R19274 | T25961 | T25960 | arg1Of | d FOXP3 ,A3 an |
| R19275 | T25963 | T25962 | arg2Of | ainin,st |
| R19276 | T25963 | T25964 | arg1Of | ainin,g |
| R19277 | T25963 | T25967 | arg1Of | ainin,wn in pan |
| R19278 | T25966 | T25964 | arg2Of | o,g |
| R19279 | T25966 | T25965 | arg1Of | o,is sh |
| R19280 | T25968 | T25967 | arg2Of | el C fol,wn in pan |
| R19281 | T25968 | T25969 | arg1Of | el C fol,lo |
| R19282 | T25972 | T25969 | arg2Of | e of ,lo |
| R19283 | T25972 | T25970 | arg1Of | e of ,wing exposu |
| R19284 | T25972 | T25971 | arg1Of | e of ,r |
| R19285 | T25976 | T25977 | arg1Of | ells,to |
| R19286 | T25977 | T25973 | arg2Of | to ,CD |
| R19287 | T25977 | T25974 | arg1Of | to ,4+CD45RA+ T |
| R19288 | T25977 | T25975 | arg1Of | to ,c |
| R19289 | T25978 | T25977 | arg2Of | anti-,to |
bionlp-st-ge-2016-spacy-parsed
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T26070 | 0-11 | NNP | denotes | Statistical |
| T26071 | 12-24 | NN | denotes | significance |
| T26072 | 25-26 | -LRB- | denotes | ( |
| T26073 | 26-33 | JJ | denotes | one-way |
| T26074 | 34-39 | NNP | denotes | Anova |
| T26075 | 39-40 | , | denotes | , |
| T26076 | 41-53 | NNP | denotes | Newman-Keuls |
| T26077 | 53-54 | -RRB- | denotes | ) |
| T26078 | 55-57 | VBZ | denotes | is |
| T26079 | 58-67 | VBN | denotes | indicated |
| T26080 | 68-70 | IN | denotes | by |
| T26081 | 71-80 | NNS | denotes | asterisks |
| T26082 | 81-82 | -LRB- | denotes | ( |
| T26083 | 82-84 | SYM | denotes | ** |
| T26084 | 84-85 | FW | denotes | p |
| T26085 | 86-87 | FW | denotes | ≤ |
| T26086 | 88-92 | CD | denotes | 0.01 |
| T26087 | 92-93 | , | denotes | , |
| T26088 | 94-97 | FW | denotes | *** |
| T26089 | 97-98 | FW | denotes | p |
| T26090 | 99-100 | FW | denotes | ≤ |
| T26091 | 101-106 | CD | denotes | 0.001 |
| T26092 | 106-107 | -RRB- | denotes | ) |
| T26093 | 107-108 | . | denotes | . |
| T26094 | 109-110 | -LRB- | denotes | ( |
| T26095 | 110-111 | $ | denotes | C |
| T26096 | 111-112 | -RRB- | denotes | ) |
| T26097 | 113-120 | JJ | denotes | Kinetic |
| T26098 | 121-129 | NN | denotes | analysis |
| T26099 | 130-132 | IN | denotes | of |
| T26100 | 133-146 | JJ | denotes | intracellular |
| T26101 | 147-152 | NNP | denotes | GATA3 |
| T26102 | 153-156 | CC | denotes | and |
| T26103 | 157-162 | NNP | denotes | FOXP3 |
| T26104 | 163-171 | NN | denotes | staining |
| T26105 | 172-174 | VBZ | denotes | is |
| T26106 | 175-180 | VBN | denotes | shown |
| T26107 | 181-183 | IN | denotes | in |
| T26108 | 184-189 | NN | denotes | panel |
| T26109 | 190-191 | NNP | denotes | C |
| T26110 | 192-201 | VBG | denotes | following |
| T26111 | 202-210 | NN | denotes | exposure |
| T26112 | 211-213 | IN | denotes | of |
| T26113 | 214-217 | NNP | denotes | CD4 |
| T26114 | 217-218 | NNP | denotes | + |
| T26115 | 218-224 | NNP | denotes | CD45RA |
| T26116 | 224-225 | VBD | denotes | + |
| T26117 | 226-227 | NNP | denotes | T |
| T26118 | 228-233 | NNS | denotes | cells |
| T26119 | 234-236 | TO | denotes | to |
| T26120 | 237-245 | JJ | denotes | anti-CD3 |
| T26121 | 245-246 | NN | denotes | / |
| T26122 | 246-248 | CD | denotes | 28 |
| T26123 | 248-249 | , | denotes | , |
| T26124 | 250-254 | NN | denotes | IL-4 |
| T26125 | 255-258 | CC | denotes | and |
| T26126 | 259-264 | NN | denotes | TGF-β |
| T26127 | 264-265 | . | denotes | . |
| R19355 | T26070 | T26071 | compound | Statistical,significance |
| R19356 | T26071 | T26079 | nsubjpass | significance,indicated |
| R19357 | T26072 | T26074 | punct | (,Anova |
| R19358 | T26073 | T26074 | amod | one-way,Anova |
| R19359 | T26074 | T26071 | appos | Anova,significance |
| R19360 | T26075 | T26074 | punct | ",",Anova |
| R19361 | T26076 | T26074 | appos | Newman-Keuls,Anova |
| R19362 | T26077 | T26074 | punct | ),Anova |
| R19363 | T26078 | T26079 | auxpass | is,indicated |
| R19364 | T26079 | T26079 | ROOT | indicated,indicated |
| R19365 | T26080 | T26079 | agent | by,indicated |
| R19366 | T26081 | T26080 | pobj | asterisks,by |
| R19367 | T26082 | T26086 | punct | (,0.01 |
| R19368 | T26083 | T26086 | punct | **,0.01 |
| R19369 | T26084 | T26086 | amod | p,0.01 |
| R19370 | T26085 | T26086 | compound | ≤,0.01 |
| R19371 | T26086 | T26081 | appos | 0.01,asterisks |
| R19372 | T26087 | T26086 | punct | ",",0.01 |
| R19373 | T26088 | T26090 | dep | ***,≤ |
| R19374 | T26089 | T26090 | dep | p,≤ |
| R19375 | T26090 | T26086 | dep | ≤,0.01 |
| R19376 | T26091 | T26090 | pobj | 0.001,≤ |
| R19377 | T26092 | T26086 | punct | ),0.01 |
| R19378 | T26093 | T26079 | punct | .,indicated |
| R19379 | T26094 | T26095 | punct | (,C |
| R19380 | T26095 | T26098 | nmod | C,analysis |
| R19381 | T26096 | T26095 | punct | ),C |
| R19382 | T26097 | T26098 | compound | Kinetic,analysis |
| R19383 | T26098 | T26106 | nsubjpass | analysis,shown |
| R19384 | T26099 | T26098 | prep | of,analysis |
| R19385 | T26100 | T26101 | compound | intracellular,GATA3 |
| R19386 | T26101 | T26099 | pobj | GATA3,of |
| R19387 | T26102 | T26101 | cc | and,GATA3 |
| R19388 | T26103 | T26101 | conj | FOXP3,GATA3 |
| R19389 | T26104 | T26098 | advmod | staining,analysis |
| R19390 | T26105 | T26106 | auxpass | is,shown |
| R19391 | T26106 | T26106 | ROOT | shown,shown |
| R19392 | T26107 | T26106 | prep | in,shown |
| R19393 | T26108 | T26109 | compound | panel,C |
| R19394 | T26109 | T26107 | pobj | C,in |
| R19395 | T26110 | T26106 | prep | following,shown |
| R19396 | T26111 | T26110 | pobj | exposure,following |
| R19397 | T26112 | T26111 | prep | of,exposure |
| R19398 | T26113 | T26115 | compound | CD4,CD45RA |
| R19399 | T26114 | T26115 | compound | +,CD45RA |
| R19400 | T26115 | T26112 | pobj | CD45RA,of |
| R19401 | T26116 | T26118 | amod | +,cells |
| R19402 | T26117 | T26118 | compound | T,cells |
| R19403 | T26118 | T26111 | conj | cells,exposure |
| R19404 | T26119 | T26120 | aux | to,anti-CD3 |
| R19405 | T26120 | T26118 | relcl | anti-CD3,cells |
| R19406 | T26121 | T26120 | dobj | /,anti-CD3 |
| R19407 | T26122 | T26121 | nummod | 28,/ |
| R19408 | T26123 | T26121 | punct | ",",/ |
| R19409 | T26124 | T26121 | conj | IL-4,/ |
| R19410 | T26125 | T26124 | cc | and,IL-4 |
| R19411 | T26126 | T26124 | conj | TGF-β,IL-4 |
| R19412 | T26127 | T26106 | punct | .,shown |
GO-MF
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T26156 | 250-254 | http://purl.obolibrary.org/obo/GO_0005136 | denotes | IL-4 |
| T26157 | 246-252 | http://purl.obolibrary.org/obo/GO_0032003 | denotes | 28, IL |
GO-CC
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T26160 | 228-233 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
| T26161 | 133-146 | http://purl.obolibrary.org/obo/GO_0005622 | denotes | intracellular |
sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T25860 | 0-265 | Sentence | denotes | Statistical significance (one-way Anova, Newman-Keuls) is indicated by asterisks (**p ≤ 0.01, ***p ≤ 0.001). (C) Kinetic analysis of intracellular GATA3 and FOXP3 staining is shown in panel C following exposure of CD4+CD45RA+ T cells to anti-CD3/28, IL-4 and TGF-β. |
| T144 | 0-265 | Sentence | denotes | Statistical significance (one-way Anova, Newman-Keuls) is indicated by asterisks (**p ≤ 0.01, ***p ≤ 0.001). (C) Kinetic analysis of intracellular GATA3 and FOXP3 staining is shown in panel C following exposure of CD4+CD45RA+ T cells to anti-CD3/28, IL-4 and TGF-β. |
events-check-again
| Id | Subject | Object | Predicate | Lexical cue | Speculation |
|---|---|---|---|---|---|
| T26239 | 147-152 | Protein | denotes | GATA3 | |
| T26240 | 157-162 | Protein | denotes | FOXP3 | |
| T26241 | 163-171 | Gene_expression | denotes | staining | true |
| T26242 | 163-171 | Gene_expression | denotes | staining | true |
| T26243 | 214-217 | Protein | denotes | CD4 | |
| T26244 | 218-224 | Protein | denotes | CD45RA | |
| T26245 | 242-245 | Protein | denotes | CD3 | |
| T26246 | 246-248 | Protein | denotes | 28 | |
| T26247 | 250-254 | Protein | denotes | IL-4 | |
| T26248 | 259-264 | Protein | denotes | TGF-β | |
| R19434 | T26239 | T26241 | themeOf | GATA3,staining | |
| R19435 | T26240 | T26242 | themeOf | FOXP3,staining |
bionlp-st-ge-2016-reference-tees
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T26171 | 147-152 | Protein | denotes | GATA3 |
| T26172 | 157-162 | Protein | denotes | FOXP3 |
| T26173 | 214-217 | Protein | denotes | CD4 |
| T26174 | 218-224 | Protein | denotes | CD45RA |
| T26175 | 250-254 | Protein | denotes | IL-4 |
| T26176 | 259-264 | Protein | denotes | TGF-β |
| T26177 | 163-171 | Gene_expression | denotes | staining |
| T26178 | 163-171 | Gene_expression | denotes | staining |
| R19425 | T26171 | T26177 | themeOf | GATA3,staining |
| R19426 | T26172 | T26178 | themeOf | FOXP3,staining |
bionlp-st-ge-2016-reference
| Id | Subject | Object | Predicate | Lexical cue | Speculation |
|---|---|---|---|---|---|
| T25862 | 163-171 | Gene_expression | denotes | staining | true |
| T25863 | 163-171 | Gene_expression | denotes | staining | true |
| T25865 | 157-162 | Protein | denotes | FOXP3 | |
| T25866 | 214-217 | Protein | denotes | CD4 | |
| T25867 | 218-224 | Protein | denotes | CD45RA | |
| T25868 | 242-245 | Protein | denotes | CD3 | |
| T25869 | 246-248 | Protein | denotes | 28 | |
| T25870 | 250-254 | Protein | denotes | IL-4 | |
| T25871 | 259-264 | Protein | denotes | TGF-β | |
| T25878 | 147-152 | Protein | denotes | GATA3 | |
| R19187 | T25865 | T25863 | themeOf | FOXP3,staining | |
| R19188 | T25878 | T25862 | themeOf | GATA3,staining |
bionlp-st-ge-2016-uniprot
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T25997 | 147-152 | P23771 | denotes | GATA3 |
| T25998 | 157-162 | Q9BZS1 | denotes | FOXP3 |
| T25999 | 214-217 | P01730 | denotes | CD4 |
| T26000 | 218-224 | P08575 | denotes | CD45RA |
| T26001 | 242-245 | P07766 | denotes | CD3 |
| T26002 | 242-245 | P20963 | denotes | CD3 |
| T26003 | 242-245 | P04234 | denotes | CD3 |
| T26004 | 242-245 | P09693 | denotes | CD3 |
| T26005 | 250-254 | P05112 | denotes | IL-4 |
| T26006 | 259-264 | P01137 | denotes | TGF-β |
test2
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T25848 | 147-152 | Protein | denotes | GATA3 |
| T25849 | 157-162 | Protein | denotes | FOXP3 |
| T25850 | 163-171 | Gene_expression | denotes | staining |
| T25851 | 214-217 | Protein | denotes | CD4 |
| T25852 | 218-224 | Protein | denotes | CD45RA |
| T25853 | 242-245 | Protein | denotes | CD3 |
| T25854 | 246-248 | Protein | denotes | 28 |
| T25855 | 250-254 | Protein | denotes | IL-4 |
| T25856 | 259-264 | Protein | denotes | TGF-β |
| R19185 | T25848 | T25850 | themeOf | GATA3,staining |
| R19186 | T25849 | T25850 | themeOf | FOXP3,staining |