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PMC:2222968 / 14494-14597 JSONTXT

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pmc-enju-pas

Id Subject Object Predicate Lexical cue
T6608 0-2 IN denotes Of
T6609 3-7 NN denotes note
T6610 7-8 -COMMA- denotes ,
T6611 9-14 NN denotes GATA3
T6612 15-18 VB denotes was
T6613 19-23 RB denotes also
T6614 24-31 VB denotes induced
T6615 32-34 IN denotes in
T6616 35-38 DT denotes the
T6617 39-47 NN denotes presence
T6618 48-50 IN denotes of
T6619 51-56 NN denotes TGF-β
T6620 57-59 IN denotes at
T6621 60-64 JJ denotes high
T6622 65-69 NN denotes IL-4
T6623 70-83 NN denotes concentration
T6624 84-85 -LRB- denotes (
T6625 85-91 NN denotes Figure
T6626 92-94 NN denotes 5A
T6627 95-98 CC denotes and
T6628 99-101 NN denotes 5B
T6629 101-102 -RRB- denotes )
R5044 T6609 T6608 arg2Of note,Of
R5046 T6611 T6612 arg1Of GATA3,was
R5047 T6611 T6614 arg2Of GATA3,induced
R5048 T6614 T6608 arg1Of induced,Of
R5049 T6614 T6610 arg1Of induced,","
R5050 T6614 T6612 arg2Of induced,was
R5051 T6614 T6613 arg1Of induced,also
R5052 T6614 T6615 arg1Of induced,in
R5053 T6617 T6615 arg2Of presence,in
R5054 T6617 T6616 arg1Of presence,the
R5055 T6617 T6618 arg1Of presence,of
R5056 T6617 T6620 arg1Of presence,at
R5057 T6619 T6618 arg2Of TGF-β,of
R5061 T6623 T6620 arg2Of concentration,at
R5062 T6623 T6621 arg1Of concentration,high
R5063 T6623 T6622 arg1Of concentration,IL-4
R5065 T6623 T6624 arg1Of concentration,(
R5067 T6626 T6625 arg1Of 5A,Figure
R5068 T6626 T6627 arg1Of 5A,and
R5069 T6627 T6624 arg2Of and,(
R5071 T6628 T6627 arg2Of 5B,and
R5072 T6629 T6624 arg3Of ),(

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T7171 0-2 IN denotes Of
T7172 3-7 NN denotes note
T7173 7-8 , denotes ,
T7174 9-14 NNP denotes GATA3
T7175 15-18 VBD denotes was
T7176 19-23 RB denotes also
T7177 24-31 VBN denotes induced
T7178 32-34 IN denotes in
T7179 35-38 DT denotes the
T7180 39-47 NN denotes presence
T7181 48-50 IN denotes of
T7182 51-56 NNP denotes TGF-β
T7183 57-59 IN denotes at
T7184 60-64 JJ denotes high
T7185 65-69 NN denotes IL-4
T7186 70-83 NN denotes concentration
T7187 84-85 -LRB- denotes (
T7188 85-91 NN denotes Figure
T7189 92-94 NN denotes 5A
T7190 95-98 CC denotes and
T7191 99-101 NN denotes 5B
T7192 101-102 -RRB- denotes )
T7193 102-103 . denotes .
R5481 T7179 T7180 det the,presence
R5484 T7180 T7178 pobj presence,in
R5489 T7181 T7180 prep of,presence
R5496 T7182 T7181 pobj TGF-β,of
R5501 T7183 T7180 prep at,presence
R5505 T7184 T7186 amod high,concentration
R5509 T7185 T7186 compound IL-4,concentration
R5513 T7186 T7183 pobj concentration,at
R5517 T7187 T7189 punct (,5A
R5521 T7188 T7189 compound Figure,5A
R5524 T7189 T7186 appos 5A,concentration
R5528 T7190 T7189 cc and,5A
R5532 T7191 T7189 conj 5B,5A
R5537 T7192 T7189 punct ),5A
R5541 T7193 T7177 punct .,induced
R5546 T7171 T7177 prep Of,induced
R5548 T7172 T7171 pobj note,Of
R5550 T7173 T7177 punct ",",induced
R5551 T7174 T7177 nsubjpass GATA3,induced
R5552 T7175 T7177 auxpass was,induced
R5554 T7176 T7177 advmod also,induced
R5555 T7177 T7177 ROOT induced,induced
R5556 T7178 T7177 prep in,induced

GO-MF

Id Subject Object Predicate Lexical cue
T7645 65-69 http://purl.obolibrary.org/obo/GO_0005136 denotes IL-4

sentences

Id Subject Object Predicate Lexical cue
T6384 0-103 Sentence denotes Of note, GATA3 was also induced in the presence of TGF-β at high IL-4 concentration (Figure 5A and 5B).
T111 0-103 Sentence denotes Of note, GATA3 was also induced in the presence of TGF-β at high IL-4 concentration (Figure 5A and 5B).

events-check-again

Id Subject Object Predicate Lexical cue
T7973 9-14 Protein denotes GATA3
T7974 24-31 Positive_regulation denotes induced
T7975 24-31 Positive_regulation denotes induced
T7976 51-56 Protein denotes TGF-β
T7977 65-69 Protein denotes IL-4
R6119 T7973 T7974 themeOf GATA3,induced
R6120 T7973 T7975 themeOf GATA3,induced
R6121 T7976 T7974 causeOf TGF-β,induced
R6122 T7977 T7975 causeOf IL-4,induced

bionlp-st-ge-2016-reference

Id Subject Object Predicate Lexical cue
T6400 24-31 Positive_regulation denotes induced
T6401 24-31 Positive_regulation denotes induced
T6441 9-14 Protein denotes GATA3
T6442 51-56 Protein denotes TGF-β
T6443 65-69 Protein denotes IL-4
R4912 T6441 T6400 themeOf GATA3,induced
R4913 T6441 T6401 themeOf GATA3,induced
R4914 T6442 T6400 causeOf TGF-β,induced
R4915 T6443 T6401 causeOf IL-4,induced

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T6984 9-14 P23771 denotes GATA3
T6985 51-56 P01137 denotes TGF-β
T6986 65-69 P05112 denotes IL-4

test2

Id Subject Object Predicate Lexical cue Negation
T6320 9-14 Protein denotes GATA3 true
T6321 24-31 Positive_regulation denotes induced true
T6322 51-56 Protein denotes TGF-β
T6323 60-64 Positive_regulation denotes high
T6324 65-69 Protein denotes IL-4
R4845 T6320 T6321 themeOf GATA3,induced
R4846 T6322 T6321 causeOf TGF-β,induced
R4847 T6323 T6321 causeOf high,induced
R4848 T6324 T6321 causeOf IL-4,induced