PMC:2222968 / 11815-12000 JSONTXT

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    2_test

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    pmc-enju-pas

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    bionlp-st-ge-2016-spacy-parsed

    {"project":"bionlp-st-ge-2016-spacy-parsed","denotations":[{"id":"T5635","span":{"begin":0,"end":5},"obj":"IN"},{"id":"T5636","span":{"begin":6,"end":16},"obj":"NN"},{"id":"T5637","span":{"begin":17,"end":19},"obj":"IN"},{"id":"T5638","span":{"begin":20,"end":23},"obj":"DT"},{"id":"T5639","span":{"begin":24,"end":39},"obj":"NN"},{"id":"T5640","span":{"begin":40,"end":47},"obj":"NN"},{"id":"T5641","span":{"begin":47,"end":48},"obj":","},{"id":"T5642","span":{"begin":49,"end":54},"obj":"CD"},{"id":"T5643","span":{"begin":55,"end":58},"obj":"CC"},{"id":"T5644","span":{"begin":59,"end":64},"obj":"CD"},{"id":"T5645","span":{"begin":65,"end":71},"obj":"VBD"},{"id":"T5646","span":{"begin":72,"end":73},"obj":"DT"},{"id":"T5647","span":{"begin":74,"end":81},"obj":"JJ"},{"id":"T5648","span":{"begin":82,"end":92},"obj":"NN"},{"id":"T5649","span":{"begin":93,"end":100},"obj":"NN"},{"id":"T5650","span":{"begin":101,"end":107},"obj":"IN"},{"id":"T5651","span":{"begin":108,"end":111},"obj":"DT"},{"id":"T5652","span":{"begin":112,"end":117},"obj":"JJ"},{"id":"T5653","span":{"begin":118,"end":119},"obj":"CD"},{"id":"T5654","span":{"begin":120,"end":121},"obj":"LS"},{"id":"T5655","span":{"begin":121,"end":122},"obj":","},{"id":"T5656","span":{"begin":123,"end":128},"obj":"WDT"},{"id":"T5657","span":{"begin":129,"end":132},"obj":"VBP"},{"id":"T5658","span":{"begin":133,"end":143},"obj":"VBN"},{"id":"T5659","span":{"begin":144,"end":146},"obj":"TO"},{"id":"T5660","span":{"begin":147,"end":149},"obj":"VB"},{"id":"T5661","span":{"begin":150,"end":158},"obj":"JJ"},{"id":"T5662","span":{"begin":159,"end":161},"obj":"IN"},{"id":"T5663","span":{"begin":162,"end":163},"obj":"NNP"},{"id":"T5664","span":{"begin":164,"end":168},"obj":"NN"},{"id":"T5665","span":{"begin":169,"end":179},"obj":"NN"},{"id":"T5666","span":{"begin":180,"end":181},"obj":"NNP"},{"id":"T5667","span":{"begin":181,"end":183},"obj":"CD"},{"id":"T5668","span":{"begin":183,"end":184},"obj":"NNP"},{"id":"T5669","span":{"begin":184,"end":185},"obj":"."}],"relations":[{"id":"R4384","pred":"prep","subj":"T5635","obj":"T5645"},{"id":"R4385","pred":"pobj","subj":"T5636","obj":"T5635"},{"id":"R4386","pred":"prep","subj":"T5637","obj":"T5636"},{"id":"R4387","pred":"det","subj":"T5638","obj":"T5640"},{"id":"R4388","pred":"compound","subj":"T5639","obj":"T5640"},{"id":"R4389","pred":"pobj","subj":"T5640","obj":"T5637"},{"id":"R4390","pred":"punct","subj":"T5641","obj":"T5645"},{"id":"R4391","pred":"nsubj","subj":"T5642","obj":"T5645"},{"id":"R4392","pred":"cc","subj":"T5643","obj":"T5642"},{"id":"R4393","pred":"conj","subj":"T5644","obj":"T5642"},{"id":"R4394","pred":"ROOT","subj":"T5645","obj":"T5645"},{"id":"R4395","pred":"det","subj":"T5646","obj":"T5649"},{"id":"R4396","pred":"amod","subj":"T5647","obj":"T5649"},{"id":"R4397","pred":"compound","subj":"T5648","obj":"T5649"},{"id":"R4398","pred":"dobj","subj":"T5649","obj":"T5645"},{"id":"R4399","pred":"prep","subj":"T5650","obj":"T5645"},{"id":"R4400","pred":"det","subj":"T5651","obj":"T5654"},{"id":"R4401","pred":"amod","subj":"T5652","obj":"T5654"},{"id":"R4402","pred":"nummod","subj":"T5653","obj":"T5654"},{"id":"R4403","pred":"pobj","subj":"T5654","obj":"T5650"},{"id":"R4404","pred":"punct","subj":"T5655","obj":"T5654"},{"id":"R4405","pred":"nsubjpass","subj":"T5656","obj":"T5658"},{"id":"R4406","pred":"auxpass","subj":"T5657","obj":"T5658"},{"id":"R4407","pred":"relcl","subj":"T5658","obj":"T5654"},{"id":"R4408","pred":"aux","subj":"T5659","obj":"T5660"},{"id":"R4409","pred":"xcomp","subj":"T5660","obj":"T5658"},{"id":"R4410","pred":"acomp","subj":"T5661","obj":"T5660"},{"id":"R4411","pred":"prep","subj":"T5662","obj":"T5661"},{"id":"R4412","pred":"compound","subj":"T5663","obj":"T5665"},{"id":"R4413","pred":"compound","subj":"T5664","obj":"T5665"},{"id":"R4414","pred":"pobj","subj":"T5665","obj":"T5662"},{"id":"R4415","pred":"quantmod","subj":"T5666","obj":"T5668"},{"id":"R4416","pred":"nummod","subj":"T5667","obj":"T5668"},{"id":"R4417","pred":"appos","subj":"T5668","obj":"T5654"},{"id":"R4418","pred":"punct","subj":"T5669","obj":"T5645"}],"text":"After initiation of the differentiation process, FOXP3 and GATA3 showed a similar expression kinetic within the first 3 d, which are considered to be critical in T cell commitment [18]."}

    sentences

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    events-check-again

    {"project":"events-check-again","denotations":[{"id":"T6119","span":{"begin":49,"end":54},"obj":"Protein"},{"id":"T6120","span":{"begin":59,"end":64},"obj":"Protein"},{"id":"T6121","span":{"begin":82,"end":92},"obj":"Gene_expression"},{"id":"T6122","span":{"begin":82,"end":92},"obj":"Gene_expression"}],"relations":[{"id":"R4737","pred":"themeOf","subj":"T6119","obj":"T6122"},{"id":"R4738","pred":"themeOf","subj":"T6120","obj":"T6121"}],"text":"After initiation of the differentiation process, FOXP3 and GATA3 showed a similar expression kinetic within the first 3 d, which are considered to be critical in T cell commitment [18]."}

    bionlp-st-ge-2016-reference-tees

    {"project":"bionlp-st-ge-2016-reference-tees","denotations":[{"id":"T5955","span":{"begin":49,"end":54},"obj":"Protein"},{"id":"T5956","span":{"begin":59,"end":64},"obj":"Protein"},{"id":"T5957","span":{"begin":82,"end":92},"obj":"Gene_expression"},{"id":"T5958","span":{"begin":82,"end":92},"obj":"Gene_expression"}],"relations":[{"id":"R4658","pred":"themeOf","subj":"T5955","obj":"T5957"},{"id":"R4659","pred":"themeOf","subj":"T5956","obj":"T5958"}],"text":"After initiation of the differentiation process, FOXP3 and GATA3 showed a similar expression kinetic within the first 3 d, which are considered to be critical in T cell commitment [18]."}

    bionlp-st-ge-2016-reference

    {"project":"bionlp-st-ge-2016-reference","denotations":[{"id":"T5172","span":{"begin":49,"end":54},"obj":"Protein"},{"id":"T5173","span":{"begin":59,"end":64},"obj":"Protein"},{"id":"T5174","span":{"begin":82,"end":92},"obj":"Gene_expression"},{"id":"T5175","span":{"begin":82,"end":92},"obj":"Gene_expression"}],"relations":[{"id":"R3975","pred":"themeOf","subj":"T5172","obj":"T5175"},{"id":"R3976","pred":"themeOf","subj":"T5173","obj":"T5174"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}],"text":"After initiation of the differentiation process, FOXP3 and GATA3 showed a similar expression kinetic within the first 3 d, which are considered to be critical in T cell commitment [18]."}

    bionlp-st-ge-2016-uniprot

    {"project":"bionlp-st-ge-2016-uniprot","denotations":[{"id":"T5541","span":{"begin":49,"end":54},"obj":"Q9BZS1"},{"id":"T5542","span":{"begin":59,"end":64},"obj":"P23771"}],"namespaces":[{"prefix":"_base","uri":"http://www.uniprot.org/uniprot/"}],"text":"After initiation of the differentiation process, FOXP3 and GATA3 showed a similar expression kinetic within the first 3 d, which are considered to be critical in T cell commitment [18]."}

    test2

    {"project":"test2","denotations":[{"id":"T5133","span":{"begin":49,"end":54},"obj":"Protein"},{"id":"T5134","span":{"begin":59,"end":64},"obj":"Protein"}],"attributes":[{"id":"M114","pred":"Negation","subj":"T5133","obj":"true"}],"text":"After initiation of the differentiation process, FOXP3 and GATA3 showed a similar expression kinetic within the first 3 d, which are considered to be critical in T cell commitment [18]."}