PMC:2065877 / 4268-4476
Annnotations
2_test
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
17997602-11867568-98185714 | 0-2 | 11867568 | denotes | 22 |
pmc-enju-pas
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1302 | 0-2 | CD | denotes | 22 |
T1303 | 2-3 | -RRB- | denotes | ] |
T1304 | 5-17 | RB | denotes | Functionally |
T1305 | 17-18 | -COMMA- | denotes | , |
T1306 | 19-23 | NN | denotes | LMP1 |
T1307 | 24-27 | MD | denotes | can |
T1308 | 28-34 | VB | denotes | rescue |
T1309 | 35-49 | JJ | denotes | CD40-deficient |
T1310 | 50-54 | NN | denotes | mice |
T1311 | 55-58 | CC | denotes | and |
T1312 | 59-66 | VB | denotes | restore |
T1313 | 67-81 | NN | denotes | immunoglobulin |
T1314 | 82-83 | -LRB- | denotes | ( |
T1315 | 83-85 | NN | denotes | Ig |
T1316 | 85-86 | -RRB- | denotes | ) |
T1317 | 87-92 | NN | denotes | class |
T1318 | 93-102 | NN | denotes | switching |
T1319 | 102-103 | -COMMA- | denotes | , |
T1320 | 104-108 | RB | denotes | most |
T1321 | 109-115 | RB | denotes | likely |
T1322 | 116-123 | IN | denotes | because |
T1323 | 124-128 | NN | denotes | LMP1 |
T1324 | 129-137 | VB | denotes | recruits |
T1325 | 138-145 | JJ | denotes | similar |
T1326 | 146-150 | NN | denotes | TRAF |
T1327 | 151-160 | NN | denotes | molecules |
T1328 | 160-161 | -COMMA- | denotes | , |
T1329 | 162-167 | NN | denotes | TRAFs |
T1330 | 168-175 | CD | denotes | 1/2/3/5 |
T1331 | 176-179 | CC | denotes | and |
T1332 | 180-185 | NN | denotes | TRAF6 |
T1333 | 185-186 | -COMMA- | denotes | , |
T1334 | 187-194 | IN | denotes | through |
T1335 | 195-198 | DT | denotes | the |
R940 | T1306 | T1307 | arg1Of | LMP1,can |
R941 | T1306 | T1308 | arg1Of | LMP1,rescue |
R942 | T1306 | T1312 | arg1Of | LMP1,restore |
R943 | T1308 | T1311 | arg1Of | rescue,and |
R944 | T1310 | T1308 | arg2Of | mice,rescue |
R945 | T1310 | T1309 | arg1Of | mice,CD40-deficient |
R946 | T1311 | T1304 | arg1Of | and,Functionally |
R947 | T1311 | T1305 | arg1Of | and,"," |
R948 | T1311 | T1307 | arg2Of | and,can |
R949 | T1311 | T1319 | arg1Of | and,"," |
R950 | T1311 | T1321 | arg1Of | and,likely |
R951 | T1311 | T1322 | arg1Of | and,because |
R954 | T1312 | T1311 | arg2Of | restore,and |
R955 | T1315 | T1314 | arg2Of | Ig,( |
R956 | T1316 | T1314 | arg3Of | ),( |
R957 | T1318 | T1312 | arg2Of | switching,restore |
R958 | T1318 | T1313 | arg1Of | switching,immunoglobulin |
R959 | T1318 | T1314 | arg1Of | switching,( |
R960 | T1318 | T1317 | arg1Of | switching,class |
R961 | T1321 | T1320 | arg1Of | likely,most |
R962 | T1323 | T1324 | arg1Of | LMP1,recruits |
R963 | T1324 | T1322 | arg2Of | recruits,because |
R964 | T1324 | T1333 | arg1Of | recruits,"," |
R965 | T1324 | T1334 | arg1Of | recruits,through |
R966 | T1327 | T1324 | arg2Of | molecules,recruits |
R967 | T1327 | T1325 | arg1Of | molecules,similar |
R968 | T1327 | T1326 | arg1Of | molecules,TRAF |
R969 | T1327 | T1328 | arg1Of | molecules,"," |
R970 | T1330 | T1331 | arg1Of | 1/2/3/5,and |
R971 | T1331 | T1328 | arg2Of | and,"," |
R972 | T1331 | T1329 | arg1Of | and,TRAFs |
R973 | T1332 | T1331 | arg2Of | TRAF6,and |
bionlp-st-ge-2016-spacy-parsed
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T2214 | 0-2 | CD | denotes | 22 |
T2215 | 2-3 | NNP | denotes | ] |
T2216 | 3-4 | . | denotes | . |
T2217 | 5-17 | RB | denotes | Functionally |
T2218 | 17-18 | , | denotes | , |
T2219 | 19-23 | NNP | denotes | LMP1 |
T2220 | 24-27 | MD | denotes | can |
T2221 | 28-34 | VB | denotes | rescue |
T2222 | 35-49 | JJ | denotes | CD40-deficient |
T2223 | 50-54 | NNS | denotes | mice |
T2224 | 55-58 | CC | denotes | and |
T2225 | 59-66 | VB | denotes | restore |
T2226 | 67-81 | NN | denotes | immunoglobulin |
T2227 | 82-83 | -LRB- | denotes | ( |
T2228 | 83-85 | NNP | denotes | Ig |
T2229 | 85-86 | -RRB- | denotes | ) |
T2230 | 87-92 | NN | denotes | class |
T2231 | 93-102 | NN | denotes | switching |
T2232 | 102-103 | , | denotes | , |
T2233 | 104-108 | RBS | denotes | most |
T2234 | 109-115 | JJ | denotes | likely |
T2235 | 116-123 | IN | denotes | because |
T2236 | 124-128 | CD | denotes | LMP1 |
T2237 | 129-137 | NNS | denotes | recruits |
T2238 | 138-145 | JJ | denotes | similar |
T2239 | 146-150 | NNP | denotes | TRAF |
T2240 | 151-160 | NNS | denotes | molecules |
T2241 | 160-161 | , | denotes | , |
T2242 | 162-167 | VBZ | denotes | TRAFs |
T2243 | 168-173 | CD | denotes | 1/2/3 |
T2244 | 173-174 | NN | denotes | / |
T2245 | 174-175 | CD | denotes | 5 |
T2246 | 176-179 | CC | denotes | and |
T2247 | 180-185 | CD | denotes | TRAF6 |
T2248 | 185-186 | , | denotes | , |
T2249 | 187-194 | IN | denotes | through |
T2250 | 195-198 | DT | denotes | the |
R1782 | T2214 | T2215 | nummod | 22,] |
R1786 | T2217 | T2221 | advmod | Functionally,rescue |
R1787 | T2218 | T2221 | punct | ",",rescue |
R1789 | T2219 | T2221 | nsubj | LMP1,rescue |
R1790 | T2220 | T2221 | aux | can,rescue |
R1791 | T2221 | T2221 | ROOT | rescue,rescue |
R1793 | T2222 | T2223 | amod | CD40-deficient,mice |
R1794 | T2223 | T2221 | dobj | mice,rescue |
R1795 | T2224 | T2221 | cc | and,rescue |
R1796 | T2225 | T2221 | conj | restore,rescue |
R1797 | T2226 | T2231 | compound | immunoglobulin,switching |
R1798 | T2227 | T2230 | punct | (,class |
R1800 | T2228 | T2230 | nmod | Ig,class |
R1801 | T2229 | T2230 | punct | ),class |
R1802 | T2230 | T2231 | compound | class,switching |
R1803 | T2231 | T2225 | dobj | switching,restore |
R1805 | T2232 | T2234 | punct | ",",likely |
R1806 | T2233 | T2234 | advmod | most,likely |
R1807 | T2234 | T2225 | conj | likely,restore |
R1808 | T2235 | T2237 | mark | because,recruits |
R1810 | T2236 | T2237 | nummod | LMP1,recruits |
R1811 | T2237 | T2234 | advcl | recruits,likely |
R1812 | T2238 | T2240 | amod | similar,molecules |
R1813 | T2239 | T2240 | compound | TRAF,molecules |
R1815 | T2240 | T2237 | dobj | molecules,recruits |
R1816 | T2241 | T2237 | punct | ",",recruits |
R1817 | T2242 | T2237 | appos | TRAFs,recruits |
R1819 | T2243 | T2244 | nummod | 1/2/3,/ |
R1820 | T2244 | T2242 | dobj | /,TRAFs |
R1821 | T2245 | T2244 | nummod | 5,/ |
R1823 | T2246 | T2244 | cc | and,/ |
R1824 | T2247 | T2244 | conj | TRAF6,/ |
R1825 | T2248 | T2247 | punct | ",",TRAF6 |
R1827 | T2249 | T2244 | prep | through,/ |
GO-BP
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T878 | 87-102 | http://purl.obolibrary.org/obo/GO_0045190 | denotes | class switching |
GO-MF
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T2668 | 67-81 | http://purl.obolibrary.org/obo/GO_0003823 | denotes | immunoglobulin |
events-check-again
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T3015 | 19-23 | Protein | denotes | LMP1 |
T3016 | 28-34 | Negative_regulation | denotes | rescue |
T3017 | 35-39 | Protein | denotes | CD40 |
T3018 | 40-49 | Negative_regulation | denotes | deficient |
T3019 | 124-128 | Protein | denotes | LMP1 |
T3020 | 129-137 | Binding | denotes | recruits |
T3021 | 129-137 | Binding | denotes | recruits |
T3022 | 129-137 | Binding | denotes | recruits |
T3023 | 129-137 | Binding | denotes | recruits |
T3024 | 129-137 | Binding | denotes | recruits |
T3025 | 162-169 | Protein | denotes | TRAFs 1 |
T3026 | 170-171 | Protein | denotes | 2 |
T3027 | 172-173 | Protein | denotes | 3 |
T3028 | 174-175 | Protein | denotes | 5 |
T3029 | 180-185 | Protein | denotes | TRAF6 |
R2375 | T3017 | T3018 | themeOf | CD40,deficient |
R2376 | T3018 | T3016 | themeOf | deficient,rescue |
R2377 | T3025 | T3021 | themeOf | TRAFs 1,recruits |
R2378 | T3026 | T3024 | themeOf | 2,recruits |
R2379 | T3027 | T3023 | themeOf | 3,recruits |
R2380 | T3028 | T3020 | themeOf | 5,recruits |
R2381 | T3029 | T3022 | themeOf | TRAF6,recruits |
bionlp-st-ge-2016-reference-tees
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T2919 | 19-23 | Protein | denotes | LMP1 |
T2920 | 35-39 | Protein | denotes | CD40 |
T2921 | 67-81 | Protein | denotes | immunoglobulin |
T2922 | 83-85 | Protein | denotes | Ig |
T2923 | 124-128 | Protein | denotes | LMP1 |
T2924 | 180-185 | Protein | denotes | TRAF6 |
T2925 | 40-49 | Negative_regulation | denotes | deficient |
T2926 | 87-92 | Entity | denotes | class |
T2927 | 93-102 | Binding | denotes | switching |
T2928 | 129-137 | Binding | denotes | recruits |
T2930 | 59-66 | Negative_regulation | denotes | restore |
R2319 | T2919 | T2930 | causeOf | LMP1,restore |
R2320 | T2920 | T2925 | themeOf | CD40,deficient |
R2321 | T2921 | T2927 | themeOf | immunoglobulin,switching |
R2322 | T2921 | T2926 | partOf | immunoglobulin,class |
R2323 | T2922 | T2926 | partOf | Ig,class |
R2325 | T2923 | T2928 | themeOf | LMP1,recruits |
R2327 | T2924 | T2928 | themeOf | TRAF6,recruits |
R2328 | T2926 | T2927 | Site | class,switching |
R2329 | T2926 | T2928 | Site | class,recruits |
R2330 | T2927 | T2930 | themeOf | switching,restore |
bionlp-st-ge-2016-reference
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T729 | 19-23 | Protein | denotes | LMP1 |
T730 | 28-34 | Negative_regulation | denotes | rescue |
T731 | 35-39 | Protein | denotes | CD40 |
T732 | 40-49 | Negative_regulation | denotes | deficient |
T733 | 124-128 | Protein | denotes | LMP1 |
T734 | 129-137 | Binding | denotes | recruits |
T735 | 129-137 | Binding | denotes | recruits |
T736 | 129-137 | Binding | denotes | recruits |
T737 | 129-137 | Binding | denotes | recruits |
T738 | 129-137 | Binding | denotes | recruits |
T739 | 162-169 | Protein | denotes | TRAFs 1 |
T740 | 170-171 | Protein | denotes | 2 |
T741 | 172-173 | Protein | denotes | 3 |
T742 | 174-175 | Protein | denotes | 5 |
T743 | 180-185 | Protein | denotes | TRAF6 |
R484 | T731 | T732 | themeOf | CD40,deficient |
R485 | T732 | T730 | themeOf | deficient,rescue |
R486 | T739 | T735 | themeOf | TRAFs 1,recruits |
R487 | T740 | T738 | themeOf | 2,recruits |
R488 | T741 | T737 | themeOf | 3,recruits |
R489 | T742 | T734 | themeOf | 5,recruits |
R490 | T743 | T736 | themeOf | TRAF6,recruits |
bionlp-st-ge-2016-uniprot
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1737 | 19-23 | P03230 | denotes | LMP1 |
T1738 | 35-39 | P25942 | denotes | CD40 |
T1739 | 124-128 | P03230 | denotes | LMP1 |
T1740 | 180-185 | Q9Y4K3 | denotes | TRAF6 |
test2
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T642 | 19-23 | Protein | denotes | LMP1 |
T643 | 35-39 | Protein | denotes | CD40 |
T644 | 40-49 | Negative_regulation | denotes | deficient |
T645 | 124-128 | Protein | denotes | LMP1 |
T646 | 129-137 | Binding | denotes | recruits |
T647 | 162-169 | Protein | denotes | TRAFs 1 |
T648 | 170-171 | Protein | denotes | 2 |
T649 | 172-173 | Protein | denotes | 3 |
T650 | 174-175 | Protein | denotes | 5 |
T651 | 180-185 | Protein | denotes | TRAF6 |
R441 | T643 | T644 | themeOf | CD40,deficient |
R442 | T645 | T646 | themeOf | LMP1,recruits |
R443 | T647 | T646 | themeOf | TRAFs 1,recruits |
R444 | T648 | T646 | themeOf | 2,recruits |
R445 | T649 | T646 | themeOf | 3,recruits |
R446 | T650 | T646 | themeOf | 5,recruits |
R447 | T651 | T646 | themeOf | TRAF6,recruits |