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PMC:194730 / 3593-4479 JSONTXT

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Id Subject Object Predicate Lexical cue
T1478 0-3 CD denotes Two
T1479 12-20 NNS denotes partners
T1480 4-11 VBG denotes binding
T1481 45-55 VBN denotes identified
T1482 21-23 IN denotes of
T1483 24-31 NN denotes annexin
T1484 32-34 NN denotes A7
T1485 35-39 VBP denotes have
T1486 40-44 VBN denotes been
T1487 55-57 , denotes ,
T1488 57-63 NN denotes sorcin
T1489 64-67 CC denotes and
T1490 68-76 NN denotes galectin
T1491 76-77 HYPH denotes -
T1492 77-78 CD denotes 3
T1493 79-80 -LRB- denotes [
T1494 80-82 CD denotes 11
T1495 82-83 SYM denotes -
T1496 83-85 CD denotes 13
T1497 85-86 -RRB- denotes ]
T1498 86-87 . denotes .
T1499 87-174 sentence denotes Sorcin is a Ca2+-binding protein and belongs to the penta EF-hand protein family [14].
T1500 88-94 NN denotes Sorcin
T1501 95-97 VBZ denotes is
T1502 98-99 DT denotes a
T1503 113-120 NN denotes protein
T1504 100-104 NN denotes Ca2+
T1505 105-112 VBG denotes binding
T1506 104-105 HYPH denotes -
T1507 121-124 CC denotes and
T1508 125-132 VBZ denotes belongs
T1509 133-135 IN denotes to
T1510 136-139 DT denotes the
T1511 162-168 NN denotes family
T1512 140-145 NN denotes penta
T1513 154-161 NN denotes protein
T1514 146-148 NN denotes EF
T1515 149-153 NN denotes hand
T1516 148-149 HYPH denotes -
T1517 169-170 -LRB- denotes [
T1518 170-172 CD denotes 14
T1519 172-173 -RRB- denotes ]
T1520 173-174 . denotes .
T1521 174-240 sentence denotes Like annexin A7 it binds to membranes in a Ca2+-dependent manner.
T1522 175-179 IN denotes Like
T1523 194-199 VBZ denotes binds
T1524 180-187 NN denotes annexin
T1525 188-190 NN denotes A7
T1526 191-193 PRP denotes it
T1527 200-202 IN denotes to
T1528 203-212 NNS denotes membranes
T1529 213-215 IN denotes in
T1530 216-217 DT denotes a
T1531 233-239 NN denotes manner
T1532 218-222 NN denotes Ca2+
T1533 223-232 JJ denotes dependent
T1534 222-223 HYPH denotes -
T1535 239-240 . denotes .
T1536 240-364 sentence denotes Sorcin also has been described as interaction partner of the ryanodine receptor, and appears to modulate its function [15].
T1537 241-247 NN denotes Sorcin
T1538 262-271 VBN denotes described
T1539 248-252 RB denotes also
T1540 253-256 VBZ denotes has
T1541 257-261 VBN denotes been
T1542 272-274 IN denotes as
T1543 275-286 NN denotes interaction
T1544 287-294 NN denotes partner
T1545 295-297 IN denotes of
T1546 298-301 DT denotes the
T1547 312-320 NN denotes receptor
T1548 302-311 NN denotes ryanodine
T1549 320-322 , denotes ,
T1550 322-325 CC denotes and
T1551 326-333 VBZ denotes appears
T1552 334-336 TO denotes to
T1553 337-345 VB denotes modulate
T1554 346-349 PRP$ denotes its
T1555 350-358 NN denotes function
T1556 359-360 -LRB- denotes [
T1557 360-362 CD denotes 15
T1558 362-363 -RRB- denotes ]
T1559 363-364 . denotes .
T1560 364-453 sentence denotes The influence of the sorcin/annexin A7 interaction on the ryanodine receptor is unknown.
T1561 365-368 DT denotes The
T1562 369-378 NN denotes influence
T1563 442-444 VBZ denotes is
T1564 379-381 IN denotes of
T1565 382-385 DT denotes the
T1566 404-415 NN denotes interaction
T1567 386-392 NN denotes sorcin
T1568 393-400 NN denotes annexin
T1569 392-393 HYPH denotes /
T1570 401-403 NN denotes A7
T1571 416-418 IN denotes on
T1572 419-422 DT denotes the
T1573 433-441 NN denotes receptor
T1574 423-432 NN denotes ryanodine
T1575 445-452 JJ denotes unknown
T1576 452-453 . denotes .
T1577 453-528 sentence denotes Sorcin and annexin A7 are coexpressed in all tissues examined so far [11].
T1578 454-460 NN denotes Sorcin
T1579 480-491 VBN denotes coexpressed
T1580 461-464 CC denotes and
T1581 465-472 NN denotes annexin
T1582 473-475 NN denotes A7
T1583 476-479 VBP denotes are
T1584 492-494 IN denotes in
T1585 495-498 DT denotes all
T1586 499-506 NNS denotes tissues
T1587 507-515 VBN denotes examined
T1588 516-518 RB denotes so
T1589 519-522 RB denotes far
T1590 523-524 -LRB- denotes [
T1591 524-526 CD denotes 11
T1592 526-527 -RRB- denotes ]
T1593 527-528 . denotes .
T1594 528-629 sentence denotes The binding of annexin A7 and sorcin is Ca2+-dependent and occurs at micromolar Ca2+ concentrations.
T1595 529-532 DT denotes The
T1596 533-540 NN denotes binding
T1597 566-568 VBZ denotes is
T1598 541-543 IN denotes of
T1599 544-551 NN denotes annexin
T1600 552-554 NN denotes A7
T1601 555-558 CC denotes and
T1602 559-565 NN denotes sorcin
T1603 569-573 NN denotes Ca2+
T1604 574-583 JJ denotes dependent
T1605 573-574 HYPH denotes -
T1606 584-587 CC denotes and
T1607 588-594 VBZ denotes occurs
T1608 595-597 IN denotes at
T1609 598-608 JJ denotes micromolar
T1610 609-613 NN denotes Ca2+
T1611 614-628 NNS denotes concentrations
T1612 628-629 . denotes .
T1613 629-779 sentence denotes The binding sites have been localised to the amino terminal GGYY and GYGG motifs in sorcin and to the GYPP motif in the amino terminus of annexin A7.
T1614 630-633 DT denotes The
T1615 642-647 NNS denotes sites
T1616 634-641 VBG denotes binding
T1617 658-667 VBN denotes localised
T1618 648-652 VBP denotes have
T1619 653-657 VBN denotes been
T1620 668-670 IN denotes to
T1621 671-674 DT denotes the
T1622 704-710 NNS denotes motifs
T1623 675-680 NN denotes amino
T1624 681-689 JJ denotes terminal
T1625 690-694 NN denotes GGYY
T1626 695-698 CC denotes and
T1627 699-703 NN denotes GYGG
T1628 711-713 IN denotes in
T1629 714-720 NN denotes sorcin
T1630 721-724 CC denotes and
T1631 725-727 IN denotes to
T1632 728-731 DT denotes the
T1633 737-742 NN denotes motif
T1634 732-736 NN denotes GYPP
T1635 743-745 IN denotes in
T1636 746-749 DT denotes the
T1637 756-764 NN denotes terminus
T1638 750-755 NN denotes amino
T1639 765-767 IN denotes of
T1640 768-775 NN denotes annexin
T1641 776-778 NN denotes A7
T1642 778-779 . denotes .
T1643 779-886 sentence denotes The proteins bind to each other with a stoichiometry of two sorcin molecules per annexin A7 molecule [12].
T1644 780-783 DT denotes The
T1645 784-792 NN denotes proteins
T1646 793-797 VBP denotes bind
T1647 798-800 IN denotes to
T1648 801-805 DT denotes each
T1649 806-811 JJ denotes other
T1650 812-816 IN denotes with
T1651 817-818 DT denotes a
T1652 819-832 NN denotes stoichiometry
T1653 833-835 IN denotes of
T1654 836-839 CD denotes two
T1655 847-856 NNS denotes molecules
T1656 840-846 NN denotes sorcin
T1657 857-860 IN denotes per
T1658 861-868 NN denotes annexin
T1659 869-871 NN denotes A7
T1660 872-880 NN denotes molecule
T1661 881-882 -LRB- denotes [
T1662 882-884 CD denotes 12
T1663 884-885 -RRB- denotes ]
T1664 885-886 . denotes .
R632 T1478 T1479 nummod Two,partners
R633 T1479 T1481 nsubjpass partners,identified
R634 T1480 T1479 amod binding,partners
R635 T1482 T1479 prep of,partners
R636 T1483 T1484 compound annexin,A7
R637 T1484 T1482 pobj A7,of
R638 T1485 T1481 aux have,identified
R639 T1486 T1481 auxpass been,identified
R640 T1487 T1481 punct ", ",identified
R641 T1488 T1481 dobj sorcin,identified
R642 T1489 T1488 cc and,sorcin
R643 T1490 T1488 conj galectin,sorcin
R644 T1491 T1490 punct -,galectin
R645 T1492 T1490 nummod 3,galectin
R646 T1493 T1494 punct [,11
R647 T1494 T1481 parataxis 11,identified
R648 T1495 T1496 punct -,13
R649 T1496 T1494 prep 13,11
R650 T1497 T1494 punct ],11
R651 T1498 T1481 punct .,identified
R652 T1500 T1501 nsubj Sorcin,is
R653 T1502 T1503 det a,protein
R654 T1503 T1501 attr protein,is
R655 T1504 T1505 npadvmod Ca2+,binding
R656 T1505 T1503 amod binding,protein
R657 T1506 T1505 punct -,binding
R658 T1507 T1501 cc and,is
R659 T1508 T1501 conj belongs,is
R660 T1509 T1508 prep to,belongs
R661 T1510 T1511 det the,family
R662 T1511 T1509 pobj family,to
R663 T1512 T1513 compound penta,protein
R664 T1513 T1511 compound protein,family
R665 T1514 T1515 compound EF,hand
R666 T1515 T1513 compound hand,protein
R667 T1516 T1515 punct -,hand
R668 T1517 T1518 punct [,14
R669 T1518 T1508 parataxis 14,belongs
R670 T1519 T1518 punct ],14
R671 T1520 T1501 punct .,is
R672 T1522 T1523 prep Like,binds
R673 T1524 T1525 compound annexin,A7
R674 T1525 T1522 pobj A7,Like
R675 T1526 T1523 nsubj it,binds
R676 T1527 T1523 prep to,binds
R677 T1528 T1527 pobj membranes,to
R678 T1529 T1523 prep in,binds
R679 T1530 T1531 det a,manner
R680 T1531 T1529 pobj manner,in
R681 T1532 T1533 npadvmod Ca2+,dependent
R682 T1533 T1531 amod dependent,manner
R683 T1534 T1533 punct -,dependent
R684 T1535 T1523 punct .,binds
R685 T1537 T1538 nsubjpass Sorcin,described
R686 T1539 T1538 advmod also,described
R687 T1540 T1538 aux has,described
R688 T1541 T1538 auxpass been,described
R689 T1542 T1538 prep as,described
R690 T1543 T1544 compound interaction,partner
R691 T1544 T1542 pobj partner,as
R692 T1545 T1544 prep of,partner
R693 T1546 T1547 det the,receptor
R694 T1547 T1545 pobj receptor,of
R695 T1548 T1547 compound ryanodine,receptor
R696 T1549 T1538 punct ", ",described
R697 T1550 T1538 cc and,described
R698 T1551 T1538 conj appears,described
R699 T1552 T1553 aux to,modulate
R700 T1553 T1551 xcomp modulate,appears
R701 T1554 T1555 poss its,function
R702 T1555 T1553 dobj function,modulate
R703 T1556 T1557 punct [,15
R704 T1557 T1551 parataxis 15,appears
R705 T1558 T1557 punct ],15
R706 T1559 T1538 punct .,described
R707 T1561 T1562 det The,influence
R708 T1562 T1563 nsubj influence,is
R709 T1564 T1562 prep of,influence
R710 T1565 T1566 det the,interaction
R711 T1566 T1564 pobj interaction,of
R712 T1567 T1568 compound sorcin,annexin
R713 T1568 T1570 compound annexin,A7
R714 T1569 T1568 punct /,annexin
R715 T1570 T1566 compound A7,interaction
R716 T1571 T1562 prep on,influence
R717 T1572 T1573 det the,receptor
R718 T1573 T1571 pobj receptor,on
R719 T1574 T1573 compound ryanodine,receptor
R720 T1575 T1563 acomp unknown,is
R721 T1576 T1563 punct .,is
R722 T1578 T1579 nsubjpass Sorcin,coexpressed
R723 T1580 T1578 cc and,Sorcin
R724 T1581 T1582 compound annexin,A7
R725 T1582 T1578 conj A7,Sorcin
R726 T1583 T1579 auxpass are,coexpressed
R727 T1584 T1579 prep in,coexpressed
R728 T1585 T1586 det all,tissues
R729 T1586 T1584 pobj tissues,in
R730 T1587 T1586 acl examined,tissues
R731 T1588 T1589 advmod so,far
R732 T1589 T1587 advmod far,examined
R733 T1590 T1591 punct [,11
R734 T1591 T1579 parataxis 11,coexpressed
R735 T1592 T1591 punct ],11
R736 T1593 T1579 punct .,coexpressed
R737 T1595 T1596 det The,binding
R738 T1596 T1597 nsubj binding,is
R739 T1598 T1596 prep of,binding
R740 T1599 T1600 compound annexin,A7
R741 T1600 T1598 pobj A7,of
R742 T1601 T1600 cc and,A7
R743 T1602 T1600 conj sorcin,A7
R744 T1603 T1604 npadvmod Ca2+,dependent
R745 T1604 T1597 acomp dependent,is
R746 T1605 T1604 punct -,dependent
R747 T1606 T1597 cc and,is
R748 T1607 T1597 conj occurs,is
R749 T1608 T1607 prep at,occurs
R750 T1609 T1610 amod micromolar,Ca2+
R751 T1610 T1611 compound Ca2+,concentrations
R752 T1611 T1608 pobj concentrations,at
R753 T1612 T1597 punct .,is
R754 T1614 T1615 det The,sites
R755 T1615 T1617 nsubjpass sites,localised
R756 T1616 T1615 amod binding,sites
R757 T1618 T1617 aux have,localised
R758 T1619 T1617 auxpass been,localised
R759 T1620 T1617 prep to,localised
R760 T1621 T1622 det the,motifs
R761 T1622 T1620 pobj motifs,to
R762 T1623 T1624 npadvmod amino,terminal
R763 T1624 T1622 amod terminal,motifs
R764 T1625 T1622 nmod GGYY,motifs
R765 T1626 T1625 cc and,GGYY
R766 T1627 T1625 conj GYGG,GGYY
R767 T1628 T1622 prep in,motifs
R768 T1629 T1628 pobj sorcin,in
R769 T1630 T1620 cc and,to
R770 T1631 T1620 conj to,to
R771 T1632 T1633 det the,motif
R772 T1633 T1631 pobj motif,to
R773 T1634 T1633 compound GYPP,motif
R774 T1635 T1633 prep in,motif
R775 T1636 T1637 det the,terminus
R776 T1637 T1635 pobj terminus,in
R777 T1638 T1637 compound amino,terminus
R778 T1639 T1637 prep of,terminus
R779 T1640 T1641 compound annexin,A7
R780 T1641 T1639 pobj A7,of
R781 T1642 T1617 punct .,localised
R782 T1644 T1645 det The,proteins
R783 T1645 T1646 nsubj proteins,bind
R784 T1647 T1646 prep to,bind
R785 T1648 T1649 det each,other
R786 T1649 T1647 pobj other,to
R787 T1650 T1646 prep with,bind
R788 T1651 T1652 det a,stoichiometry
R789 T1652 T1650 pobj stoichiometry,with
R790 T1653 T1652 prep of,stoichiometry
R791 T1654 T1655 nummod two,molecules
R792 T1655 T1653 pobj molecules,of
R793 T1656 T1655 compound sorcin,molecules
R794 T1657 T1655 prep per,molecules
R795 T1658 T1659 compound annexin,A7
R796 T1659 T1660 compound A7,molecule
R797 T1660 T1657 pobj molecule,per
R798 T1661 T1662 punct [,12
R799 T1662 T1646 parataxis 12,bind
R800 T1663 T1662 punct ],12
R801 T1664 T1646 punct .,bind

craft-ca-core-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T785 24-34 PR:000004080 denotes annexin A7
T786 57-63 PR:000015619 denotes sorcin
T787 68-78 PR:000009771 denotes galectin-3
T788 88-94 PR:000015619 denotes Sorcin
T789 100-104 CHEBI:29108 denotes Ca2+
T790 180-190 PR:000004080 denotes annexin A7
T791 203-212 GO:0016020 denotes membranes
T792 218-222 CHEBI:29108 denotes Ca2+
T793 241-247 PR:000015619 denotes Sorcin
T794 302-311 CHEBI:8925 denotes ryanodine
T795 337-345 GO:0065007 denotes modulate
T796 386-392 PR:000015619 denotes sorcin
T797 393-403 PR:000004080 denotes annexin A7
T798 423-432 CHEBI:8925 denotes ryanodine
T799 454-460 PR:000015619 denotes Sorcin
T800 465-475 PR:000004080 denotes annexin A7
T801 482-491 GO:0010467 denotes expressed
T802 499-506 UBERON:0000479 denotes tissues
T803 544-554 PR:000004080 denotes annexin A7
T804 559-565 PR:000015619 denotes sorcin
T805 569-573 CHEBI:29108 denotes Ca2+
T806 609-613 CHEBI:29108 denotes Ca2+
T807 634-647 SO:0000409 denotes binding sites
T808 714-720 PR:000015619 denotes sorcin
T809 768-778 PR:000004080 denotes annexin A7
T810 840-846 PR:000015619 denotes sorcin
T811 847-856 CHEBI:36357 denotes molecules
T812 861-871 PR:000004080 denotes annexin A7
T813 872-880 CHEBI:36357 denotes molecule

2_test

Id Subject Object Predicate Lexical cue
12925238-9268363-8102382 80-82 9268363 denotes 11
12925238-10767422-8102382 80-82 10767422 denotes 11
12925238-11839755-8102382 80-82 11839755 denotes 11
12925238-9441591-8102383 170-172 9441591 denotes 14
12925238-7592856-8102384 360-362 7592856 denotes 15
12925238-9268363-8102385 524-526 9268363 denotes 11
12925238-10767422-8102386 882-884 10767422 denotes 12

craft-ca-core-ex-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T973 4-11 CHEMINF_GO_EXT:chemical_binding_or_bond_formation denotes binding
T974 24-34 PR_EXT:000004080 denotes annexin A7
T975 57-63 PR_EXT:000015619 denotes sorcin
T976 68-78 PR_EXT:000009771 denotes galectin-3
T977 88-94 PR_EXT:000015619 denotes Sorcin
T978 100-104 CHEBI:29108 denotes Ca2+
T979 105-112 CHEMINF_GO_EXT:chemical_binding_or_bond_formation denotes binding
T980 113-120 CHEBI_PR_EXT:protein denotes protein
T981 154-161 CHEBI_PR_EXT:protein denotes protein
T982 180-190 PR_EXT:000004080 denotes annexin A7
T983 194-199 CHEMINF_GO_EXT:chemical_binding_or_bond_formation denotes binds
T984 203-212 GO:0016020 denotes membranes
T985 218-222 CHEBI:29108 denotes Ca2+
T986 241-247 PR_EXT:000015619 denotes Sorcin
T987 302-311 CHEBI:8925 denotes ryanodine
T988 312-320 GO_EXT:0004872 denotes receptor
T989 337-345 GO:0065007 denotes modulate
T990 386-392 PR_EXT:000015619 denotes sorcin
T991 393-403 PR_EXT:000004080 denotes annexin A7
T992 423-432 CHEBI:8925 denotes ryanodine
T993 433-441 GO_EXT:0004872 denotes receptor
T994 454-460 PR_EXT:000015619 denotes Sorcin
T995 465-475 PR_EXT:000004080 denotes annexin A7
T996 482-491 GO:0010467 denotes expressed
T997 499-506 UBERON:0000479 denotes tissues
T998 533-540 CHEMINF_GO_EXT:chemical_binding_or_bond_formation denotes binding
T999 544-554 PR_EXT:000004080 denotes annexin A7
T1000 559-565 PR_EXT:000015619 denotes sorcin
T1001 569-573 CHEBI:29108 denotes Ca2+
T1002 609-613 CHEBI:29108 denotes Ca2+
T1003 634-641 CHEMINF_GO_EXT:chemical_binding_or_bond_formation denotes binding
T1004 634-647 SO_EXT:0000409 denotes binding sites
T1005 675-689 CHEBI_SO_EXT:N_terminus_or_N_terminal_region denotes amino terminal
T1006 704-710 SO_EXT:sequence_or_structure_motif denotes motifs
T1007 714-720 PR_EXT:000015619 denotes sorcin
T1008 737-742 SO_EXT:sequence_or_structure_motif denotes motif
T1009 750-764 CHEBI_SO_EXT:N_terminus_or_N_terminal_region denotes amino terminus
T1010 768-778 PR_EXT:000004080 denotes annexin A7
T1011 784-792 CHEBI_PR_EXT:protein denotes proteins
T1012 793-797 CHEMINF_GO_EXT:chemical_binding_or_bond_formation denotes bind
T1013 840-846 PR_EXT:000015619 denotes sorcin
T1014 847-856 CHEBI:36357 denotes molecules
T1015 861-871 PR_EXT:000004080 denotes annexin A7
T1016 872-880 CHEBI:36357 denotes molecule