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PMC:194730 / 2466-3211 JSONTXT

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craft-sa-dev

Id Subject Object Predicate Lexical cue
T1256 41-48 VBN denotes thought
T1257 2-4 IN denotes to
T1258 5-15 RB denotes negatively
T1259 16-23 JJ denotes charged
T1260 24-37 NNS denotes phospholipids
T1261 38-40 VBZ denotes is
T1262 49-51 TO denotes to
T1263 55-63 VBN denotes mediated
T1264 52-54 VB denotes be
T1265 64-66 IN denotes by
T1266 67-71 NN denotes Ca2+
T1267 72-76 NNS denotes ions
T1268 76-77 . denotes .
T1269 77-204 sentence denotes Annexin A7 is unique in that it carries an extraordinarily long and hydrophobic amino terminus with more than 100 amino acids.
T1270 78-85 NN denotes Annexin
T1271 86-88 NN denotes A7
T1272 89-91 VBZ denotes is
T1273 92-98 JJ denotes unique
T1274 99-101 IN denotes in
T1275 110-117 VBZ denotes carries
T1276 102-106 IN denotes that
T1277 107-109 PRP denotes it
T1278 118-120 DT denotes an
T1279 164-172 NN denotes terminus
T1280 121-136 RB denotes extraordinarily
T1281 137-141 JJ denotes long
T1282 142-145 CC denotes and
T1283 146-157 JJ denotes hydrophobic
T1284 158-163 NN denotes amino
T1285 173-177 IN denotes with
T1286 178-182 JJR denotes more
T1287 188-191 CD denotes 100
T1288 183-187 IN denotes than
T1289 198-203 NNS denotes acids
T1290 192-197 NN denotes amino
T1291 203-204 . denotes .
T1292 204-270 sentence denotes Alternative splicing gives rise to two isoforms of 47 and 51 kDa.
T1293 205-216 JJ denotes Alternative
T1294 217-225 NN denotes splicing
T1295 226-231 VBZ denotes gives
T1296 232-236 NN denotes rise
T1297 237-239 IN denotes to
T1298 240-243 CD denotes two
T1299 244-252 NNS denotes isoforms
T1300 253-255 IN denotes of
T1301 256-258 CD denotes 47
T1302 266-269 NN denotes kDa
T1303 259-262 CC denotes and
T1304 263-265 CD denotes 51
T1305 269-270 . denotes .
T1306 270-375 sentence denotes Both isoforms differ by an additional cassette exon located in the first third of the N-terminal domain.
T1307 271-275 DT denotes Both
T1308 276-284 NNS denotes isoforms
T1309 285-291 VBP denotes differ
T1310 292-294 IN denotes by
T1311 295-297 DT denotes an
T1312 318-322 NN denotes exon
T1313 298-308 JJ denotes additional
T1314 309-317 NN denotes cassette
T1315 323-330 JJ denotes located
T1316 331-333 IN denotes in
T1317 334-337 DT denotes the
T1318 344-349 NN denotes third
T1319 338-343 JJ denotes first
T1320 350-352 IN denotes of
T1321 353-356 DT denotes the
T1322 368-374 NN denotes domain
T1323 357-358 NN denotes N
T1324 359-367 JJ denotes terminal
T1325 358-359 HYPH denotes -
T1326 374-375 . denotes .
T1327 375-537 sentence denotes Most tissues harbor only the 47 kDa isoform, both forms are found in brain and heart, while the large isoform is exclusively expressed in mature skeletal muscle.
T1328 376-380 JJS denotes Most
T1329 381-388 NNS denotes tissues
T1330 389-395 VBP denotes harbor
T1331 436-441 VBN denotes found
T1332 396-400 RB denotes only
T1333 412-419 NN denotes isoform
T1334 401-404 DT denotes the
T1335 405-407 CD denotes 47
T1336 408-411 NN denotes kDa
T1337 419-421 , denotes ,
T1338 421-425 DT denotes both
T1339 426-431 NNS denotes forms
T1340 432-435 VBP denotes are
T1341 442-444 IN denotes in
T1342 445-450 NN denotes brain
T1343 451-454 CC denotes and
T1344 455-460 NN denotes heart
T1345 460-462 , denotes ,
T1346 462-467 IN denotes while
T1347 501-510 VBN denotes expressed
T1348 468-471 DT denotes the
T1349 478-485 NN denotes isoform
T1350 472-477 JJ denotes large
T1351 486-488 VBZ denotes is
T1352 489-500 RB denotes exclusively
T1353 511-513 IN denotes in
T1354 514-520 JJ denotes mature
T1355 530-536 NN denotes muscle
T1356 521-529 JJ denotes skeletal
T1357 536-537 . denotes .
T1358 537-743 sentence denotes At the cellular level annexin A7 can be detected in the cytosol, at the plasma membrane, around the nucleus, at vesicular structures including adrenal chromaffin granules, and at the t-tubule system [5,6].
T1359 538-540 IN denotes At
T1360 578-586 VBN denotes detected
T1361 541-544 DT denotes the
T1362 554-559 NN denotes level
T1363 545-553 JJ denotes cellular
T1364 560-567 NN denotes annexin
T1365 568-570 NN denotes A7
T1366 571-574 MD denotes can
T1367 575-577 VB denotes be
T1368 587-589 IN denotes in
T1369 590-593 DT denotes the
T1370 594-601 NN denotes cytosol
T1371 601-603 , denotes ,
T1372 603-605 IN denotes at
T1373 606-609 DT denotes the
T1374 617-625 NN denotes membrane
T1375 610-616 NN denotes plasma
T1376 625-627 , denotes ,
T1377 627-633 IN denotes around
T1378 634-637 DT denotes the
T1379 638-645 NN denotes nucleus
T1380 645-647 , denotes ,
T1381 647-649 IN denotes at
T1382 650-659 JJ denotes vesicular
T1383 660-670 NNS denotes structures
T1384 671-680 VBG denotes including
T1385 681-688 JJ denotes adrenal
T1386 700-708 NNS denotes granules
T1387 689-699 NN denotes chromaffin
T1388 708-710 , denotes ,
T1389 710-713 CC denotes and
T1390 714-716 IN denotes at
T1391 717-720 DT denotes the
T1392 730-736 NN denotes system
T1393 721-722 NN denotes t
T1394 723-729 NN denotes tubule
T1395 722-723 HYPH denotes -
T1396 737-738 -LRB- denotes [
T1397 740-741 CD denotes 6
T1398 738-739 CD denotes 5
T1399 739-740 , denotes ,
T1400 741-742 -RRB- denotes ]
T1401 742-743 . denotes .
R429 T1258 T1259 advmod negatively,charged
R430 T1259 T1260 amod charged,phospholipids
R431 T1260 T1257 pobj phospholipids,to
R432 T1261 T1256 auxpass is,thought
R433 T1262 T1263 aux to,mediated
R434 T1263 T1256 xcomp mediated,thought
R435 T1264 T1263 auxpass be,mediated
R436 T1265 T1263 agent by,mediated
R437 T1266 T1267 compound Ca2+,ions
R438 T1267 T1265 pobj ions,by
R439 T1268 T1256 punct .,thought
R440 T1270 T1271 compound Annexin,A7
R441 T1271 T1272 nsubj A7,is
R442 T1273 T1272 acomp unique,is
R443 T1274 T1275 mark in,carries
R444 T1275 T1272 advcl carries,is
R445 T1276 T1275 mark that,carries
R446 T1277 T1275 nsubj it,carries
R447 T1278 T1279 det an,terminus
R448 T1279 T1275 dobj terminus,carries
R449 T1280 T1281 advmod extraordinarily,long
R450 T1281 T1279 amod long,terminus
R451 T1282 T1281 cc and,long
R452 T1283 T1281 conj hydrophobic,long
R453 T1284 T1279 compound amino,terminus
R454 T1285 T1279 prep with,terminus
R455 T1286 T1287 amod more,100
R456 T1287 T1289 nummod 100,acids
R457 T1288 T1287 quantmod than,100
R458 T1289 T1285 pobj acids,with
R459 T1290 T1289 compound amino,acids
R460 T1291 T1272 punct .,is
R461 T1293 T1294 amod Alternative,splicing
R462 T1294 T1295 nsubj splicing,gives
R463 T1296 T1295 dobj rise,gives
R464 T1297 T1295 prep to,gives
R465 T1298 T1299 nummod two,isoforms
R466 T1299 T1297 pobj isoforms,to
R467 T1300 T1299 prep of,isoforms
R468 T1301 T1302 nummod 47,kDa
R469 T1302 T1300 pobj kDa,of
R470 T1303 T1301 cc and,47
R471 T1304 T1301 conj 51,47
R472 T1305 T1295 punct .,gives
R473 T1307 T1308 det Both,isoforms
R474 T1308 T1309 nsubj isoforms,differ
R475 T1310 T1309 prep by,differ
R476 T1311 T1312 det an,exon
R477 T1312 T1310 pobj exon,by
R478 T1313 T1312 amod additional,exon
R479 T1314 T1312 compound cassette,exon
R480 T1315 T1312 amod located,exon
R481 T1316 T1315 prep in,located
R482 T1317 T1318 det the,third
R483 T1318 T1316 pobj third,in
R484 T1319 T1318 amod first,third
R485 T1320 T1318 prep of,third
R486 T1321 T1322 det the,domain
R487 T1322 T1320 pobj domain,of
R488 T1323 T1324 npadvmod N,terminal
R489 T1324 T1322 amod terminal,domain
R490 T1325 T1324 punct -,terminal
R491 T1326 T1309 punct .,differ
R492 T1328 T1329 amod Most,tissues
R493 T1329 T1330 nsubj tissues,harbor
R494 T1330 T1331 ccomp harbor,found
R495 T1332 T1333 advmod only,isoform
R496 T1333 T1330 dobj isoform,harbor
R497 T1334 T1333 det the,isoform
R498 T1335 T1336 nummod 47,kDa
R499 T1336 T1333 compound kDa,isoform
R500 T1337 T1331 punct ", ",found
R501 T1338 T1339 det both,forms
R502 T1339 T1331 nsubjpass forms,found
R503 T1340 T1331 auxpass are,found
R504 T1341 T1331 prep in,found
R505 T1342 T1341 pobj brain,in
R506 T1343 T1342 cc and,brain
R507 T1344 T1342 conj heart,brain
R508 T1345 T1331 punct ", ",found
R509 T1346 T1347 prep while,expressed
R510 T1347 T1331 advcl expressed,found
R511 T1348 T1349 det the,isoform
R512 T1349 T1347 nsubjpass isoform,expressed
R513 T1350 T1349 amod large,isoform
R514 T1351 T1347 auxpass is,expressed
R515 T1352 T1347 advmod exclusively,expressed
R516 T1353 T1347 prep in,expressed
R517 T1354 T1355 amod mature,muscle
R518 T1355 T1353 pobj muscle,in
R519 T1356 T1355 amod skeletal,muscle
R520 T1357 T1331 punct .,found
R521 T1359 T1360 prep At,detected
R522 T1361 T1362 det the,level
R523 T1362 T1359 pobj level,At
R524 T1363 T1362 amod cellular,level
R525 T1364 T1365 compound annexin,A7
R526 T1365 T1360 nsubjpass A7,detected
R527 T1366 T1360 aux can,detected
R528 T1367 T1360 auxpass be,detected
R529 T1368 T1360 prep in,detected
R530 T1369 T1370 det the,cytosol
R531 T1370 T1368 pobj cytosol,in
R532 T1371 T1368 punct ", ",in
R533 T1372 T1368 conj at,in
R534 T1373 T1374 det the,membrane
R535 T1374 T1372 pobj membrane,at
R536 T1375 T1374 compound plasma,membrane
R537 T1376 T1372 punct ", ",at
R538 T1377 T1372 conj around,at
R539 T1378 T1379 det the,nucleus
R540 T1379 T1377 pobj nucleus,around
R541 T1380 T1377 punct ", ",around
R542 T1381 T1377 conj at,around
R543 T1382 T1383 amod vesicular,structures
R544 T1383 T1381 pobj structures,at
R545 T1384 T1383 prep including,structures
R546 T1385 T1386 amod adrenal,granules
R547 T1386 T1384 pobj granules,including
R548 T1387 T1386 compound chromaffin,granules
R549 T1388 T1381 punct ", ",at
R550 T1389 T1381 cc and,at
R551 T1390 T1381 conj at,at
R552 T1391 T1392 det the,system
R553 T1392 T1390 pobj system,at
R554 T1393 T1394 compound t,tubule
R555 T1394 T1392 compound tubule,system
R556 T1395 T1394 punct -,tubule
R557 T1396 T1397 punct [,6
R558 T1397 T1360 parataxis 6,detected
R559 T1398 T1397 nummod 5,6
R560 T1399 T1397 punct ",",6
R561 T1400 T1397 punct ],6
R562 T1401 T1360 punct .,detected

craft-ca-core-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T743 5-37 CHEBI:62643 denotes negatively charged phospholipids
T744 67-76 CHEBI:29108 denotes Ca2+ ions
T745 78-88 PR:000004080 denotes Annexin A7
T746 205-225 GO:0000380 denotes Alternative splicing
T747 244-252 SO:0001060 denotes isoforms
T748 276-284 SO:0001060 denotes isoforms
T749 318-322 SO:0000147 denotes exon
T750 368-374 SO:0000417 denotes domain
T751 381-388 UBERON:0000479 denotes tissues
T752 412-419 SO:0001060 denotes isoform
T753 445-450 UBERON:0000955 denotes brain
T754 455-460 UBERON:0000948 denotes heart
T755 478-485 SO:0001060 denotes isoform
T756 501-510 GO:0010467 denotes expressed
T757 521-529 UBERON:0004288 denotes skeletal
T758 560-570 PR:000004080 denotes annexin A7
T759 594-601 GO:0005829 denotes cytosol
T760 610-625 GO:0005886 denotes plasma membrane
T761 638-645 GO:0005634 denotes nucleus
T762 650-659 GO:0031982 denotes vesicular
T763 681-688 UBERON:0002369 denotes adrenal
T764 689-708 GO:0042583 denotes chromaffin granules
T765 721-729 GO:0030315 denotes t-tubule

2_test

Id Subject Object Predicate Lexical cue
12925238-7738119-8102378 738-739 7738119 denotes 5
12925238-11338180-8102379 740-741 11338180 denotes 6

craft-ca-core-ex-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T924 5-37 CHEBI:62643 denotes negatively charged phospholipids
T925 67-76 CHEBI:29108 denotes Ca2+ ions
T926 78-88 PR_EXT:000004080 denotes Annexin A7
T927 158-172 CHEBI_SO_EXT:N_terminus_or_N_terminal_region denotes amino terminus
T928 192-203 CHEBI_SO_EXT:amino_acid denotes amino acids
T929 205-225 GO:0000380 denotes Alternative splicing
T930 244-252 SO_EXT:0001060 denotes isoforms
T931 276-284 SO_EXT:0001060 denotes isoforms
T932 318-322 SO_EXT:0000147 denotes exon
T933 357-367 CHEBI_SO_EXT:N_terminus_or_N_terminal_region denotes N-terminal
T934 368-374 SO_EXT:0000417 denotes domain
T935 381-388 UBERON:0000479 denotes tissues
T936 412-419 SO_EXT:0001060 denotes isoform
T937 445-450 UBERON:0000955 denotes brain
T938 455-460 UBERON:0000948 denotes heart
T939 478-485 SO_EXT:0001060 denotes isoform
T940 501-510 GO:0010467 denotes expressed
T941 521-536 UBERON_EXT:skeletal_muscle_organ_or_tissue denotes skeletal muscle
T942 545-553 CL_GO_EXT:cell denotes cellular
T943 560-570 PR_EXT:000004080 denotes annexin A7
T944 594-601 GO:0005829 denotes cytosol
T945 610-625 GO:0005886 denotes plasma membrane
T946 638-645 GO:0005634 denotes nucleus
T947 650-659 GO:0031982 denotes vesicular
T948 681-688 UBERON:0002369 denotes adrenal
T949 689-708 GO:0042583 denotes chromaffin granules
T950 721-729 GO:0030315 denotes t-tubule