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PMC:1942070 / 6684-6816 JSONTXT

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pmc-enju-pas

Id Subject Object Predicate Lexical cue
T2650 0-5 RB denotes Hence
T2651 5-6 -COMMA- denotes ,
T2652 7-11 NN denotes PKD3
T2653 12-14 RB denotes as
T2654 15-19 RB denotes well
T2655 20-22 IN denotes as
T2656 23-27 NN denotes PKD1
T2657 28-31 MD denotes can
T2658 32-40 VB denotes regulate
T2659 41-46 NN denotes HSP27
T2660 47-62 NN denotes phosphorylation
T2661 63-66 CC denotes and
T2662 67-69 IN denotes in
T2663 70-74 NN denotes DT40
T2664 75-76 NN denotes B
T2665 77-82 NN denotes cells
T2666 83-87 PRP denotes they
T2667 88-91 VB denotes are
T2668 92-104 RB denotes functionally
T2669 105-114 JJ denotes redundant
T2670 115-117 IN denotes as
T2671 118-123 NN denotes HSP27
T2672 124-131 NN denotes kinases
R2253 T2652 T2655 arg1Of PKD3,as
R2254 T2655 T2653 arg1Of as,as
R2255 T2655 T2654 arg1Of as,well
R2256 T2655 T2657 arg1Of as,can
R2257 T2655 T2658 arg1Of as,regulate
R2258 T2656 T2655 arg2Of PKD1,as
R2259 T2658 T2657 arg2Of regulate,can
R2260 T2658 T2661 arg1Of regulate,and
R2261 T2660 T2658 arg2Of phosphorylation,regulate
R2262 T2660 T2659 arg1Of phosphorylation,HSP27
R2263 T2661 T2650 arg1Of and,Hence
R2264 T2661 T2651 arg1Of and,","
R2265 T2665 T2662 arg2Of cells,in
R2266 T2665 T2663 arg1Of cells,DT40
R2267 T2665 T2664 arg1Of cells,B
R2268 T2666 T2667 arg1Of they,are
R2269 T2666 T2669 arg2Of they,redundant
R2270 T2669 T2661 arg2Of redundant,and
R2271 T2669 T2662 arg1Of redundant,in
R2272 T2669 T2667 arg2Of redundant,are
R2273 T2669 T2668 arg1Of redundant,functionally
R2274 T2669 T2670 arg1Of redundant,as
R2275 T2672 T2670 arg2Of kinases,as
R2276 T2672 T2671 arg1Of kinases,HSP27

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T3112 0-5 RB denotes Hence
T3113 5-6 , denotes ,
T3114 7-11 NNP denotes PKD3
T3115 12-14 RB denotes as
T3116 15-19 RB denotes well
T3117 20-22 IN denotes as
T3118 23-27 NNP denotes PKD1
T3119 28-31 MD denotes can
T3120 32-40 VB denotes regulate
T3121 41-46 NNP denotes HSP27
T3122 47-62 NN denotes phosphorylation
T3123 63-66 CC denotes and
T3124 67-69 IN denotes in
T3125 70-74 NNP denotes DT40
T3126 75-76 NNP denotes B
T3127 77-82 NNS denotes cells
T3128 83-87 PRP denotes they
T3129 88-91 VBP denotes are
T3130 92-104 RB denotes functionally
T3131 105-114 JJ denotes redundant
T3132 115-117 IN denotes as
T3133 118-123 NNP denotes HSP27
T3134 124-131 NNS denotes kinases
T3135 131-132 . denotes .
R2661 T3112 T3120 advmod Hence,regulate
R2662 T3113 T3120 punct ",",regulate
R2663 T3114 T3120 nsubj PKD3,regulate
R2664 T3115 T3117 advmod as,as
R2665 T3116 T3117 advmod well,as
R2666 T3117 T3114 cc as,PKD3
R2667 T3118 T3114 conj PKD1,PKD3
R2668 T3119 T3120 aux can,regulate
R2669 T3120 T3120 ROOT regulate,regulate
R2670 T3121 T3122 compound HSP27,phosphorylation
R2671 T3122 T3120 dobj phosphorylation,regulate
R2672 T3123 T3120 cc and,regulate
R2673 T3124 T3120 prep in,regulate
R2674 T3125 T3126 compound DT40,B
R2675 T3126 T3127 compound B,cells
R2676 T3127 T3124 pobj cells,in
R2677 T3128 T3129 nsubj they,are
R2678 T3129 T3120 conj are,regulate
R2679 T3130 T3131 advmod functionally,redundant
R2680 T3131 T3129 acomp redundant,are
R2681 T3132 T3131 prep as,redundant
R2682 T3133 T3134 compound HSP27,kinases
R2683 T3134 T3132 pobj kinases,as
R2684 T3135 T3129 punct .,are

GO-BP

Id Subject Object Predicate Lexical cue
T2281 47-62 http://purl.obolibrary.org/obo/GO_0016310 denotes phosphorylation

GO-CC

Id Subject Object Predicate Lexical cue
T3149 77-82 http://purl.obolibrary.org/obo/GO_0005623 denotes cells

sentences

Id Subject Object Predicate Lexical cue
T2271 0-132 Sentence denotes Hence, PKD3 as well as PKD1 can regulate HSP27 phosphorylation and in DT40 B cells they are functionally redundant as HSP27 kinases.
T49 0-132 Sentence denotes Hence, PKD3 as well as PKD1 can regulate HSP27 phosphorylation and in DT40 B cells they are functionally redundant as HSP27 kinases.

events-check-again

Id Subject Object Predicate Lexical cue
T3615 7-11 Protein denotes PKD3
T3616 23-27 Protein denotes PKD1
T3617 32-40 Regulation denotes regulate
T3618 32-40 Regulation denotes regulate
T3619 41-46 Protein denotes HSP27
T3620 47-62 Phosphorylation denotes phosphorylation
T3621 118-123 Protein denotes HSP27
R2969 T3615 T3618 causeOf PKD3,regulate
R2971 T3616 T3617 causeOf PKD1,regulate
R2973 T3619 T3620 themeOf HSP27,phosphorylation
R2974 T3620 T3618 themeOf phosphorylation,regulate
R2975 T3620 T3617 themeOf phosphorylation,regulate

bionlp-st-ge-2016-reference-tees

Id Subject Object Predicate Lexical cue
T3723 7-11 Protein denotes PKD3
T3724 23-27 Protein denotes PKD1
T3725 41-46 Protein denotes HSP27
T3726 118-131 Protein denotes HSP27 kinases
T3727 47-62 Phosphorylation denotes phosphorylation
T3728 32-40 Regulation denotes regulate
T3729 32-40 Regulation denotes regulate
R3033 T3723 T3728 causeOf PKD3,regulate
R3035 T3724 T3729 causeOf PKD1,regulate
R3036 T3725 T3727 themeOf HSP27,phosphorylation
R3038 T3727 T3728 themeOf phosphorylation,regulate
R3039 T3727 T3729 themeOf phosphorylation,regulate

bionlp-st-ge-2016-reference

Id Subject Object Predicate Lexical cue
T2252 7-11 Protein denotes PKD3
T2253 23-27 Protein denotes PKD1
T2254 32-40 Regulation denotes regulate
T2255 32-40 Regulation denotes regulate
T2256 41-46 Protein denotes HSP27
T2257 47-62 Phosphorylation denotes phosphorylation
T2258 118-123 Protein denotes HSP27
R1883 T2253 T2254 causeOf PKD1,regulate
R1884 T2256 T2257 themeOf HSP27,phosphorylation
R1885 T2257 T2255 themeOf phosphorylation,regulate
R1886 T2257 T2254 themeOf phosphorylation,regulate
R1882 T2252 T2255 causeOf PKD3,regulate

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T2713 7-11 Q99853 denotes PKD3
T2714 23-27 P98161 denotes PKD1
T2715 41-46 P04792 denotes HSP27
T2716 118-123 P04792 denotes HSP27

test2

Id Subject Object Predicate Lexical cue
T2170 7-11 Protein denotes PKD3
T2171 23-27 Protein denotes PKD1
T2172 32-40 Regulation denotes regulate
T2173 41-46 Protein denotes HSP27
T2174 47-62 Phosphorylation denotes phosphorylation
T2175 105-114 Negative_regulation denotes redundant
T2176 118-123 Protein denotes HSP27
R1831 T2170 T2172 causeOf PKD3,regulate
R1832 T2171 T2172 causeOf PKD1,regulate
R1833 T2173 T2174 themeOf HSP27,phosphorylation
R1834 T2174 T2172 themeOf phosphorylation,regulate