PMC:1942070 / 5012-5283 JSONTXT

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    pmc-enju-pas

    {"project":"pmc-enju-pas","denotations":[{"id":"T2369","span":{"begin":0,"end":5},"obj":"RB"},{"id":"T2370","span":{"begin":5,"end":6},"obj":"-COMMA-"},{"id":"T2371","span":{"begin":7,"end":9},"obj":"IN"},{"id":"T2372","span":{"begin":10,"end":13},"obj":"DT"},{"id":"T2373","span":{"begin":14,"end":22},"obj":"NN"},{"id":"T2374","span":{"begin":23,"end":25},"obj":"IN"},{"id":"T2375","span":{"begin":26,"end":37},"obj":"NN"},{"id":"T2376","span":{"begin":37,"end":38},"obj":"-COMMA-"},{"id":"T2377","span":{"begin":39,"end":48},"obj":"NN"},{"id":"T2378","span":{"begin":49,"end":59},"obj":"NN"},{"id":"T2379","span":{"begin":60,"end":62},"obj":"IN"},{"id":"T2380","span":{"begin":63,"end":69},"obj":"NN"},{"id":"T2381","span":{"begin":70,"end":76},"obj":"JJ"},{"id":"T2382","span":{"begin":77,"end":85},"obj":"JJ"},{"id":"T2383","span":{"begin":86,"end":91},"obj":"NN"},{"id":"T2384","span":{"begin":92,"end":94},"obj":"VB"},{"id":"T2385","span":{"begin":95,"end":105},"obj":"JJ"},{"id":"T2386","span":{"begin":106,"end":108},"obj":"TO"},{"id":"T2387","span":{"begin":109,"end":119},"obj":"JJ"},{"id":"T2388","span":{"begin":120,"end":124},"obj":"NN"},{"id":"T2389","span":{"begin":125,"end":132},"obj":"JJ"},{"id":"T2390","span":{"begin":133,"end":135},"obj":"IN"},{"id":"T2391","span":{"begin":136,"end":145},"obj":"JJ"},{"id":"T2392","span":{"begin":146,"end":150},"obj":"NN"},{"id":"T2393","span":{"begin":151,"end":156},"obj":"NN"},{"id":"T2394","span":{"begin":157,"end":160},"obj":"CC"},{"id":"T2395","span":{"begin":161,"end":168},"obj":"NN"},{"id":"T2396","span":{"begin":169,"end":171},"obj":"IN"},{"id":"T2397","span":{"begin":172,"end":183},"obj":"NN"},{"id":"T2398","span":{"begin":184,"end":188},"obj":"IN"},{"id":"T2399","span":{"begin":189,"end":192},"obj":"DT"},{"id":"T2400","span":{"begin":193,"end":200},"obj":"NN"},{"id":"T2401","span":{"begin":201,"end":206},"obj":"NN"},{"id":"T2402","span":{"begin":207,"end":210},"obj":"IN"},{"id":"T2403","span":{"begin":211,"end":212},"obj":"CD"},{"id":"T2404","span":{"begin":213,"end":217},"obj":"NN"},{"id":"T2405","span":{"begin":218,"end":225},"obj":"VB"},{"id":"T2406","span":{"begin":226,"end":228},"obj":"IN"},{"id":"T2407","span":{"begin":229,"end":230},"obj":"DT"},{"id":"T2408","span":{"begin":231,"end":241},"obj":"RB"},{"id":"T2409","span":{"begin":242,"end":246},"obj":"JJ"},{"id":"T2410","span":{"begin":247,"end":250},"obj":"NN"},{"id":"T2411","span":{"begin":251,"end":260},"obj":"NN"},{"id":"T2412","span":{"begin":261,"end":262},"obj":"-LRB-"},{"id":"T2413","span":{"begin":262,"end":266},"obj":"NN"},{"id":"T2414","span":{"begin":267,"end":269},"obj":"NN"},{"id":"T2415","span":{"begin":269,"end":270},"obj":"-RRB-"}],"relations":[{"id":"R1966","pred":"arg2Of","subj":"T2373","obj":"T2371"},{"id":"R1967","pred":"arg1Of","subj":"T2373","obj":"T2372"},{"id":"R1968","pred":"arg1Of","subj":"T2373","obj":"T2374"},{"id":"R1969","pred":"arg2Of","subj":"T2375","obj":"T2374"},{"id":"R1970","pred":"arg1Of","subj":"T2378","obj":"T2377"},{"id":"R1971","pred":"arg1Of","subj":"T2378","obj":"T2379"},{"id":"R1972","pred":"arg1Of","subj":"T2378","obj":"T2384"},{"id":"R1973","pred":"arg1Of","subj":"T2378","obj":"T2385"},{"id":"R1974","pred":"arg2Of","subj":"T2383","obj":"T2379"},{"id":"R1975","pred":"arg1Of","subj":"T2383","obj":"T2380"},{"id":"R1976","pred":"arg1Of","subj":"T2383","obj":"T2381"},{"id":"R1977","pred":"arg1Of","subj":"T2383","obj":"T2382"},{"id":"R1978","pred":"arg1Of","subj":"T2384","obj":"T2394"},{"id":"R1979","pred":"arg2Of","subj":"T2385","obj":"T2384"},{"id":"R1980","pred":"arg1Of","subj":"T2385","obj":"T2386"},{"id":"R1981","pred":"arg1Of","subj":"T2385","obj":"T2390"},{"id":"R1982","pred":"arg2Of","subj":"T2388","obj":"T2386"},{"id":"R1983","pred":"arg1Of","subj":"T2388","obj":"T2387"},{"id":"R1984","pred":"arg1Of","subj":"T2388","obj":"T2389"},{"id":"R1985","pred":"arg2Of","subj":"T2393","obj":"T2390"},{"id":"R1986","pred":"arg1Of","subj":"T2393","obj":"T2391"},{"id":"R1987","pred":"arg1Of","subj":"T2393","obj":"T2392"},{"id":"R1988","pred":"arg1Of","subj":"T2394","obj":"T2369"},{"id":"R1989","pred":"arg1Of","subj":"T2394","obj":"T2370"},{"id":"R1990","pred":"arg1Of","subj":"T2394","obj":"T2371"},{"id":"R1991","pred":"arg1Of","subj":"T2394","obj":"T2376"},{"id":"R1992","pred":"arg1Of","subj":"T2395","obj":"T2396"},{"id":"R1993","pred":"arg1Of","subj":"T2395","obj":"T2405"},{"id":"R1994","pred":"arg2Of","subj":"T2397","obj":"T2396"},{"id":"R1995","pred":"arg1Of","subj":"T2397","obj":"T2398"},{"id":"R1996","pred":"arg1Of","subj":"T2397","obj":"T2402"},{"id":"R1997","pred":"arg2Of","subj":"T2401","obj":"T2398"},{"id":"R1998","pred":"arg1Of","subj":"T2401","obj":"T2399"},{"id":"R1999","pred":"arg1Of","subj":"T2401","obj":"T2400"},{"id":"R2000","pred":"arg2Of","subj":"T2404","obj":"T2402"},{"id":"R2001","pred":"arg1Of","subj":"T2404","obj":"T2403"},{"id":"R2002","pred":"arg2Of","subj":"T2405","obj":"T2394"},{"id":"R2003","pred":"arg1Of","subj":"T2405","obj":"T2406"},{"id":"R2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in the presence of doxycycline, Flag-PKD3 expression in PKD1/3 double knockout cells is comparable to endogenous PKD3 present in wild-type DT40 cells and removal of doxycycline from the culture media for 5 days results in a completely null PKD phenotype (Fig. 1A)."}

    bionlp-st-ge-2016-spacy-parsed

    {"project":"bionlp-st-ge-2016-spacy-parsed","denotations":[{"id":"T2817","span":{"begin":0,"end":5},"obj":"RB"},{"id":"T2818","span":{"begin":5,"end":6},"obj":","},{"id":"T2819","span":{"begin":7,"end":9},"obj":"IN"},{"id":"T2820","span":{"begin":10,"end":13},"obj":"DT"},{"id":"T2821","span":{"begin":14,"end":22},"obj":"NN"},{"id":"T2822","span":{"begin":23,"end":25},"obj":"IN"},{"id":"T2823","span":{"begin":26,"end":37},"obj":"NN"},{"id":"T2824","span":{"begin":37,"end":38},"obj":","},{"id":"T2825","span":{"begin":39,"end":48},"obj":"NN"},{"id":"T2826","span":{"begin":49,"end":59},"obj":"NN"},{"id":"T2827","span":{"begin":60,"end":62},"obj":"IN"},{"id":"T2828","span":{"begin":63,"end":69},"obj":"CD"},{"id":"T2829","span":{"begin":70,"end":76},"obj":"JJ"},{"id":"T2830","span":{"begin":77,"end":85},"obj":"NN"},{"id":"T2831","span":{"begin":86,"end":91},"obj":"NNS"},{"id":"T2832","span":{"begin":92,"end":94},"obj":"VBZ"},{"id":"T2833","span":{"begin":95,"end":105},"obj":"JJ"},{"id":"T2834","span":{"begin":106,"end":108},"obj":"TO"},{"id":"T2835","span":{"begin":109,"end":119},"obj":"JJ"},{"id":"T2836","span":{"begin":120,"end":124},"obj":"JJ"},{"id":"T2837","span":{"begin":125,"end":132},"obj":"NN"},{"id":"T2838","span":{"begin":133,"end":135},"obj":"IN"},{"id":"T2839","span":{"begin":136,"end":145},"obj":"JJ"},{"id":"T2840","span":{"begin":146,"end":150},"obj":"NNP"},{"id":"T2841","span":{"begin":151,"end":156},"obj":"NNS"},{"id":"T2842","span":{"begin":157,"end":160},"obj":"CC"},{"id":"T2843","span":{"begin":161,"end":168},"obj":"NN"},{"id":"T2844","span":{"begin":169,"end":171},"obj":"IN"},{"id":"T2845","span":{"begin":172,"end":183},"obj":"NN"},{"id":"T2846","span":{"begin":184,"end":188},"obj":"IN"},{"id":"T2847","span":{"begin":189,"end":192},"obj":"DT"},{"id":"T2848","span":{"begin":193,"end":200},"obj":"NN"},{"id":"T2849","span":{"begin":201,"end":206},"obj":"NNS"},{"id":"T2850","span":{"begin":207,"end":210},"obj":"IN"},{"id":"T2851","span":{"begin":211,"end":212},"obj":"CD"},{"id":"T2852","span":{"begin":213,"end":217},"obj":"NNS"},{"id":"T2853","span":{"begin":218,"end":225},"obj":"NNS"},{"id":"T2854","span":{"begin":226,"end":228},"obj":"IN"},{"id":"T2855","span":{"begin":229,"end":230},"obj":"DT"},{"id":"T2856","span":{"begin":231,"end":241},"obj":"RB"},{"id":"T2857","span":{"begin":242,"end":246},"obj":"JJ"},{"id":"T2858","span":{"begin":247,"end":250},"obj":"NNP"},{"id":"T2859","span":{"begin":251,"end":260},"obj":"NN"},{"id":"T2860","span":{"begin":261,"end":262},"obj":"-LRB-"},{"id":"T2861","span":{"begin":262,"end":266},"obj":"NNP"},{"id":"T2862","span":{"begin":267,"end":269},"obj":"NNP"},{"id":"T2863","span":{"begin":269,"end":270},"obj":"-RRB-"},{"id":"T2864","span":{"begin":270,"end":271},"obj":"."}],"relations":[{"id":"R2366","pred":"advmod","subj":"T2817","obj":"T2832"},{"id":"R2367","pred":"punct","subj":"T2818","obj":"T2832"},{"id":"R2368","pred":"nmod","subj":"T2819","obj":"T2826"},{"id":"R2369","pred":"det","subj":"T2820","obj":"T2821"},{"id":"R2370","pred":"pobj","subj":"T2821","obj":"T2819"},{"id":"R2371","pred":"prep","subj":"T2822","obj":"T2821"},{"id":"R2372","pred":"pobj","subj":"T2823","obj":"T2822"},{"id":"R2373","pred":"punct","subj":"T2824","obj":"T2821"},{"id":"R2374","pred":"compound","subj":"T2825","obj":"T2826"},{"id":"R2375","pred":"nsubj","subj":"T2826","obj":"T2832"},{"id":"R2376","pred":"prep","subj":"T2827","obj":"T2826"},{"id":"R2377","pred":"nummod","subj":"T2828","obj":"T2831"},{"id":"R2378","pred":"amod","subj":"T2829","obj":"T2831"},{"id":"R2379","pred":"compound","subj":"T2830","obj":"T2831"},{"id":"R2380","pred":"pobj","subj":"T2831","obj":"T2827"},{"id":"R2381","pred":"ROOT","subj":"T2832","obj":"T2832"},{"id":"R2382","pred":"acomp","subj":"T2833","obj":"T2832"},{"id":"R2383","pred":"prep","subj":"T2834","obj":"T2833"},{"id":"R2384","pred":"amod","subj":"T2835","obj":"T2837"},{"id":"R2385","pred":"amod","subj":"T2836","obj":"T2837"},{"id":"R2386","pred":"pobj","subj":"T2837","obj":"T2834"},{"id":"R2387","pred":"prep","subj":"T2838","obj":"T2837"},{"id":"R2388","pred":"amod","subj":"T2839","obj":"T2841"},{"id":"R2389","pred":"compound","subj":"T2840","obj":"T2841"},{"id":"R2390","pred":"pobj","subj":"T2841","obj":"T2838"},{"id":"R2391","pred":"cc","subj":"T2842","obj":"T2837"},{"id":"R2392","pred":"conj","subj":"T2843","obj":"T2837"},{"id":"R2393","pred":"prep","subj":"T2844","obj":"T2843"},{"id":"R2394","pred":"pobj","subj":"T2845","obj":"T2844"},{"id":"R2395","pred":"prep","subj":"T2846","obj":"T2843"},{"id":"R2396","pred":"det","subj":"T2847","obj":"T2849"},{"id":"R2397","pred":"compound","subj":"T2848","obj":"T2849"},{"id":"R2398","pred":"pobj","subj":"T2849","obj":"T2846"},{"id":"R2399","pred":"prep","subj":"T2850","obj":"T2832"},{"id":"R2400","pred":"nummod","subj":"T2851","obj":"T2852"},{"id":"R2401","pred":"compound","subj":"T2852","obj":"T2853"},{"id":"R2402","pred":"pobj","subj":"T2853","obj":"T2850"},{"id":"R2403","pred":"prep","subj":"T2854","obj":"T2853"},{"id":"R2404","pred":"det","subj":"T2855","obj":"T2859"},{"id":"R2405","pred":"advmod","subj":"T2856","obj":"T2857"},{"id":"R2406","pred":"amod","subj":"T2857","obj":"T2859"},{"id":"R2407","pred":"compound","subj":"T2858","obj":"T2859"},{"id":"R2408","pred":"pobj","subj":"T2859","obj":"T2854"},{"id":"R2409","pred":"punct","subj":"T2860","obj":"T2862"},{"id":"R2410","pred":"compound","subj":"T2861","obj":"T2862"},{"id":"R2411","pred":"appos","subj":"T2862","obj":"T2859"},{"id":"R2412","pred":"punct","subj":"T2863","obj":"T2862"},{"id":"R2413","pred":"punct","subj":"T2864","obj":"T2832"}],"text":"Hence, in the presence of doxycycline, Flag-PKD3 expression in PKD1/3 double knockout cells is comparable to endogenous PKD3 present in wild-type DT40 cells and removal of doxycycline from the culture media for 5 days results in a completely null PKD phenotype (Fig. 1A)."}

    GO-CC

    {"project":"GO-CC","denotations":[{"id":"T3139","span":{"begin":86,"end":91},"obj":"http://purl.obolibrary.org/obo/GO_0005623"},{"id":"T3140","span":{"begin":151,"end":156},"obj":"http://purl.obolibrary.org/obo/GO_0005623"}],"text":"Hence, in the presence of doxycycline, Flag-PKD3 expression in PKD1/3 double knockout cells is comparable to endogenous PKD3 present in wild-type DT40 cells and removal of doxycycline from the culture media for 5 days results in a completely null PKD phenotype (Fig. 1A)."}

    sentences

    {"project":"sentences","denotations":[{"id":"T2262","span":{"begin":0,"end":271},"obj":"Sentence"},{"id":"T40","span":{"begin":0,"end":271},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"Hence, in the presence of doxycycline, Flag-PKD3 expression in PKD1/3 double knockout cells is comparable to endogenous PKD3 present in wild-type DT40 cells and removal of doxycycline from the culture media for 5 days results in a completely null PKD phenotype (Fig. 1A)."}

    events-check-again

    {"project":"events-check-again","denotations":[{"id":"T3563","span":{"begin":120,"end":124},"obj":"Protein"},{"id":"T3557","span":{"begin":44,"end":48},"obj":"Protein"},{"id":"T3558","span":{"begin":49,"end":59},"obj":"Gene_expression"},{"id":"T3559","span":{"begin":63,"end":67},"obj":"Protein"},{"id":"T3560","span":{"begin":68,"end":69},"obj":"Protein"},{"id":"T3561","span":{"begin":70,"end":85},"obj":"Negative_regulation"},{"id":"T3562","span":{"begin":70,"end":85},"obj":"Negative_regulation"}],"relations":[{"id":"R2939","pred":"themeOf","subj":"T3557","obj":"T3558"},{"id":"R2940","pred":"themeOf","subj":"T3559","obj":"T3562"},{"id":"R2943","pred":"themeOf","subj":"T3560","obj":"T3561"}],"text":"Hence, in the presence of doxycycline, Flag-PKD3 expression in PKD1/3 double knockout cells is comparable to endogenous PKD3 present in wild-type DT40 cells and removal of doxycycline from the culture media for 5 days results in a completely null PKD phenotype (Fig. 1A)."}

    bionlp-st-ge-2016-reference-tees

    {"project":"bionlp-st-ge-2016-reference-tees","denotations":[{"id":"T3648","span":{"begin":39,"end":43},"obj":"Protein"},{"id":"T3649","span":{"begin":44,"end":48},"obj":"Protein"},{"id":"T3650","span":{"begin":63,"end":69},"obj":"Protein"},{"id":"T3651","span":{"begin":120,"end":124},"obj":"Protein"},{"id":"T3652","span":{"begin":49,"end":59},"obj":"Gene_expression"},{"id":"T3653","span":{"begin":49,"end":59},"obj":"Gene_expression"}],"relations":[{"id":"R2995","pred":"themeOf","subj":"T3648","obj":"T3652"},{"id":"R2999","pred":"themeOf","subj":"T3649","obj":"T3653"}],"text":"Hence, in the presence of doxycycline, Flag-PKD3 expression in PKD1/3 double knockout cells is comparable to endogenous PKD3 present in wild-type DT40 cells and removal of doxycycline from the culture media for 5 days results in a completely null PKD phenotype (Fig. 1A)."}

    bionlp-st-ge-2016-reference

    {"project":"bionlp-st-ge-2016-reference","denotations":[{"id":"T2194","span":{"begin":44,"end":48},"obj":"Protein"},{"id":"T2195","span":{"begin":49,"end":59},"obj":"Gene_expression"},{"id":"T2196","span":{"begin":63,"end":67},"obj":"Protein"},{"id":"T2197","span":{"begin":68,"end":69},"obj":"Protein"},{"id":"T2198","span":{"begin":70,"end":85},"obj":"Negative_regulation"},{"id":"T2199","span":{"begin":70,"end":85},"obj":"Negative_regulation"},{"id":"T2200","span":{"begin":120,"end":124},"obj":"Protein"}],"relations":[{"id":"R1844","pred":"themeOf","subj":"T2194","obj":"T2195"},{"id":"R1845","pred":"themeOf","subj":"T2196","obj":"T2199"},{"id":"R1846","pred":"themeOf","subj":"T2197","obj":"T2198"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}],"text":"Hence, in the presence of doxycycline, Flag-PKD3 expression in PKD1/3 double knockout cells is comparable to endogenous PKD3 present in wild-type DT40 cells and removal of doxycycline from the culture media for 5 days results in a completely null PKD phenotype (Fig. 1A)."}

    bionlp-st-ge-2016-uniprot

    {"project":"bionlp-st-ge-2016-uniprot","denotations":[{"id":"T2684","span":{"begin":44,"end":48},"obj":"Q99853"},{"id":"T2685","span":{"begin":63,"end":67},"obj":"P98161"},{"id":"T2686","span":{"begin":120,"end":124},"obj":"Q99853"}],"namespaces":[{"prefix":"_base","uri":"http://www.uniprot.org/uniprot/"}],"text":"Hence, in the presence of doxycycline, Flag-PKD3 expression in PKD1/3 double knockout cells is comparable to endogenous PKD3 present in wild-type DT40 cells and removal of doxycycline from the culture media for 5 days results in a completely null PKD phenotype (Fig. 1A)."}

    test2

    {"project":"test2","denotations":[{"id":"T2116","span":{"begin":44,"end":48},"obj":"Protein"},{"id":"T2117","span":{"begin":49,"end":59},"obj":"Gene_expression"},{"id":"T2118","span":{"begin":63,"end":67},"obj":"Protein"},{"id":"T2119","span":{"begin":68,"end":69},"obj":"Protein"},{"id":"T2120","span":{"begin":77,"end":85},"obj":"Negative_regulation"},{"id":"T2121","span":{"begin":120,"end":124},"obj":"Protein"}],"relations":[{"id":"R1797","pred":"themeOf","subj":"T2116","obj":"T2117"},{"id":"R1798","pred":"themeOf","subj":"T2118","obj":"T2120"}],"attributes":[{"id":"M5","pred":"Speculation","subj":"T2117","obj":"true"}],"text":"Hence, in the presence of doxycycline, Flag-PKD3 expression in PKD1/3 double knockout cells is comparable to endogenous PKD3 present in wild-type DT40 cells and removal of doxycycline from the culture media for 5 days results in a completely null PKD phenotype (Fig. 1A)."}