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PMC:1942070 / 2713-3066 JSONTXT

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2_test

Id Subject Object Predicate Lexical cue
17349631-16449666-30580530 142-143 16449666 denotes 1

MyTest

Id Subject Object Predicate Lexical cue
17349631-16449666-30580530 142-143 16449666 denotes 1

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T815 0-2 TO denotes To
T816 3-14 VB denotes investigate
T817 15-18 DT denotes the
T818 19-29 JJ denotes biological
T819 30-34 NN denotes role
T820 35-37 IN denotes of
T821 38-42 NN denotes PKDs
T822 43-45 PRP denotes we
T823 46-50 VB denotes have
T824 51-60 VB denotes generated
T825 61-65 NN denotes DT40
T826 66-67 NN denotes B
T827 68-72 NN denotes cell
T828 73-78 NN denotes lines
T829 79-83 WDT denotes that
T830 84-88 VB denotes lack
T831 89-99 NN denotes expression
T832 100-102 IN denotes of
T833 103-106 CD denotes one
T834 107-109 CC denotes or
T835 110-114 JJ denotes more
T836 115-122 NN denotes members
T837 123-125 IN denotes of
T838 126-129 DT denotes the
T839 130-133 NN denotes PKD
T840 134-140 NN denotes family
T841 141-142 -LRB- denotes [
T842 142-143 CD denotes 1
T843 143-144 -RRB- denotes ]
T844 144-145 -COMMA- denotes ,
T845 146-154 VB denotes allowing
T846 155-157 PRP denotes us
T847 158-160 TO denotes to
T848 161-172 VB denotes investigate
T849 173-176 DT denotes the
T850 177-185 NN denotes function
T851 185-186 -LRB- denotes (
T852 186-187 NN denotes s
T853 187-188 -RRB- denotes )
T854 189-191 IN denotes of
T855 192-195 NN denotes PKD
T856 196-204 NN denotes isoforms
T857 205-214 VB denotes following
T858 215-216 NN denotes B
T859 217-221 NN denotes cell
T860 222-229 NN denotes antigen
T861 230-238 NN denotes receptor
T862 239-240 -LRB- denotes (
T863 240-243 NN denotes BCR
T864 243-244 -RRB- denotes )
T865 245-256 NN denotes stimulation
T866 256-257 -COMMA- denotes ,
T867 258-260 RB denotes as
T868 261-265 RB denotes well
T869 266-276 VB denotes addressing
T870 277-280 DT denotes the
T871 281-286 NN denotes issue
T872 287-289 IN denotes of
T873 290-300 JJ denotes functional
T874 301-311 NN denotes redundancy
T875 312-319 IN denotes between
T876 320-323 DT denotes the
T877 324-333 JJ denotes different
T878 334-337 NN denotes PKD
T879 338-344 NN denotes family
T880 345-352 NN denotes members
R718 T816 T815 arg1Of investigate,To
R719 T819 T816 arg2Of role,investigate
R720 T819 T817 arg1Of role,the
R721 T819 T818 arg1Of role,biological
R722 T819 T820 arg1Of role,of
R723 T821 T820 arg2Of PKDs,of
R724 T822 T816 arg1Of we,investigate
R725 T822 T823 arg1Of we,have
R726 T822 T824 arg1Of we,generated
R727 T824 T815 modOf generated,To
R728 T824 T823 arg2Of generated,have
R729 T828 T824 arg2Of lines,generated
R730 T828 T825 arg1Of lines,DT40
R731 T828 T826 arg1Of lines,B
R732 T828 T827 arg1Of lines,cell
R733 T828 T829 arg1Of lines,that
R734 T828 T830 arg1Of lines,lack
R735 T830 T844 arg1Of lack,","
R736 T830 T845 modOf lack,allowing
R737 T830 T866 arg1Of lack,","
R738 T830 T869 modOf lack,addressing
R739 T831 T830 arg2Of expression,lack
R740 T831 T832 arg1Of expression,of
R741 T833 T834 arg1Of one,or
R742 T833 T835 arg1Of one,more
R743 T836 T832 arg2Of members,of
R744 T836 T833 arg1Of members,one
R745 T836 T837 arg1Of members,of
R746 T840 T837 arg2Of family,of
R747 T840 T838 arg1Of family,the
R748 T840 T839 arg1Of family,PKD
R749 T840 T841 arg1Of family,[
R750 T842 T841 arg2Of 1,[
R751 T843 T841 arg3Of ],[
R752 T846 T845 arg2Of us,allowing
R753 T846 T848 arg1Of us,investigate
R754 T848 T845 arg3Of investigate,allowing
R755 T848 T847 arg1Of investigate,to
R756 T850 T848 arg2Of function,investigate
R757 T850 T849 arg1Of function,the
R758 T850 T851 arg1Of function,(
R759 T850 T854 arg1Of function,of
R760 T850 T857 arg1Of function,following
R761 T852 T851 arg2Of s,(
R762 T853 T851 arg3Of ),(
R763 T856 T854 arg2Of isoforms,of
R764 T856 T855 arg1Of isoforms,PKD
R765 T863 T862 arg2Of BCR,(
R766 T864 T862 arg3Of ),(
R767 T865 T857 arg2Of stimulation,following
R768 T865 T858 arg1Of stimulation,B
R769 T865 T859 arg1Of stimulation,cell
R770 T865 T860 arg1Of stimulation,antigen
R771 T865 T861 arg1Of stimulation,receptor
R772 T865 T862 arg1Of stimulation,(
R773 T869 T867 arg1Of addressing,as
R774 T869 T868 arg1Of addressing,well
R775 T871 T869 arg2Of issue,addressing
R776 T871 T870 arg1Of issue,the
R777 T871 T872 arg1Of issue,of
R778 T874 T872 arg2Of redundancy,of
R779 T874 T873 arg1Of redundancy,functional
R780 T874 T875 arg1Of redundancy,between
R781 T880 T875 arg2Of members,between
R782 T880 T876 arg1Of members,the
R783 T880 T877 arg1Of members,different
R784 T880 T878 arg1Of members,PKD
R785 T880 T879 arg1Of members,family

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T1305 0-2 TO denotes To
T1306 3-14 VB denotes investigate
T1307 15-18 DT denotes the
T1308 19-29 JJ denotes biological
T1309 30-34 NN denotes role
T1310 35-37 IN denotes of
T1311 38-42 NNS denotes PKDs
T1312 43-45 PRP denotes we
T1313 46-50 VBP denotes have
T1314 51-60 VBN denotes generated
T1315 61-65 NNP denotes DT40
T1316 66-67 NNP denotes B
T1317 68-72 NN denotes cell
T1318 73-78 NNS denotes lines
T1319 79-83 WDT denotes that
T1320 84-88 VBP denotes lack
T1321 89-99 NN denotes expression
T1322 100-102 IN denotes of
T1323 103-106 CD denotes one
T1324 107-109 CC denotes or
T1325 110-114 JJR denotes more
T1326 115-122 NNS denotes members
T1327 123-125 IN denotes of
T1328 126-129 DT denotes the
T1329 130-133 NNP denotes PKD
T1330 134-140 NN denotes family
T1331 141-142 NNP denotes [
T1332 142-143 CD denotes 1
T1333 143-144 NNP denotes ]
T1334 144-145 , denotes ,
T1335 146-154 VBG denotes allowing
T1336 155-157 PRP denotes us
T1337 158-160 TO denotes to
T1338 161-172 VB denotes investigate
T1339 173-176 DT denotes the
T1340 177-185 NN denotes function
T1341 185-186 -LRB- denotes (
T1342 186-187 PRP denotes s
T1343 187-188 -RRB- denotes )
T1344 189-191 IN denotes of
T1345 192-195 NNP denotes PKD
T1346 196-204 VBZ denotes isoforms
T1347 205-214 VBG denotes following
T1348 215-216 NNP denotes B
T1349 217-221 NN denotes cell
T1350 222-229 NN denotes antigen
T1351 230-238 NN denotes receptor
T1352 239-240 -LRB- denotes (
T1353 240-243 NNP denotes BCR
T1354 243-244 -RRB- denotes )
T1355 245-256 NN denotes stimulation
T1356 256-257 , denotes ,
T1357 258-260 RB denotes as
T1358 261-265 RB denotes well
T1359 266-276 VBG denotes addressing
T1360 277-280 DT denotes the
T1361 281-286 NN denotes issue
T1362 287-289 IN denotes of
T1363 290-300 JJ denotes functional
T1364 301-311 NN denotes redundancy
T1365 312-319 IN denotes between
T1366 320-323 DT denotes the
T1367 324-333 JJ denotes different
T1368 334-337 NNP denotes PKD
T1369 338-344 NN denotes family
T1370 345-352 NNS denotes members
T1371 352-353 . denotes .
R1196 T1310 T1309 prep of,role
R1197 T1311 T1310 pobj PKDs,of
R1198 T1312 T1314 nsubj we,generated
R1199 T1313 T1314 aux have,generated
R1200 T1314 T1314 ROOT generated,generated
R1201 T1315 T1318 compound DT40,lines
R1202 T1316 T1318 compound B,lines
R1203 T1317 T1318 compound cell,lines
R1204 T1318 T1314 dobj lines,generated
R1205 T1319 T1320 nsubj that,lack
R1206 T1320 T1318 relcl lack,lines
R1207 T1321 T1320 dobj expression,lack
R1208 T1322 T1321 prep of,expression
R1209 T1323 T1326 nummod one,members
R1210 T1324 T1323 cc or,one
R1211 T1325 T1323 conj more,one
R1212 T1326 T1322 pobj members,of
R1213 T1327 T1326 prep of,members
R1214 T1328 T1330 det the,family
R1215 T1329 T1330 compound PKD,family
R1216 T1330 T1327 pobj family,of
R1217 T1331 T1333 nmod [,]
R1218 T1332 T1333 nummod 1,]
R1219 T1333 T1326 appos ],members
R1220 T1334 T1314 punct ",",generated
R1221 T1335 T1314 advcl allowing,generated
R1222 T1336 T1338 nsubj us,investigate
R1223 T1337 T1338 aux to,investigate
R1224 T1338 T1335 ccomp investigate,allowing
R1225 T1339 T1340 det the,function
R1226 T1340 T1338 dobj function,investigate
R1227 T1341 T1340 punct (,function
R1228 T1342 T1340 appos s,function
R1229 T1343 T1340 punct ),function
R1230 T1344 T1340 prep of,function
R1231 T1345 T1344 pobj PKD,of
R1232 T1346 T1344 pobj isoforms,of
R1233 T1347 T1346 acl following,isoforms
R1234 T1348 T1350 compound B,antigen
R1235 T1349 T1350 compound cell,antigen
R1236 T1350 T1351 compound antigen,receptor
R1237 T1351 T1347 dobj receptor,following
R1238 T1352 T1353 punct (,BCR
R1239 T1353 T1351 appos BCR,receptor
R1240 T1354 T1353 punct ),BCR
R1241 T1355 T1351 conj stimulation,receptor
R1242 T1356 T1347 punct ",",following
R1243 T1357 T1359 advmod as,addressing
R1244 T1358 T1359 advmod well,addressing
R1245 T1359 T1338 advcl addressing,investigate
R1246 T1360 T1361 det the,issue
R1247 T1361 T1359 dobj issue,addressing
R1248 T1362 T1361 prep of,issue
R1249 T1363 T1364 amod functional,redundancy
R1250 T1364 T1362 pobj redundancy,of
R1251 T1365 T1364 prep between,redundancy
R1252 T1366 T1370 det the,members
R1253 T1367 T1370 amod different,members
R1254 T1368 T1370 compound PKD,members
R1255 T1369 T1370 compound family,members
R1256 T1370 T1365 pobj members,between
R1257 T1371 T1314 punct .,generated
R1191 T1305 T1306 aux To,investigate
R1192 T1306 T1314 advcl investigate,generated
R1193 T1307 T1309 det the,role
R1194 T1308 T1309 amod biological,role
R1195 T1309 T1306 dobj role,investigate

GO-CC

Id Subject Object Predicate Lexical cue
T1493 68-72 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T1494 217-221 http://purl.obolibrary.org/obo/GO_0005623 denotes cell

sentences

Id Subject Object Predicate Lexical cue
T498 0-353 Sentence denotes To investigate the biological role of PKDs we have generated DT40 B cell lines that lack expression of one or more members of the PKD family [1], allowing us to investigate the function(s) of PKD isoforms following B cell antigen receptor (BCR) stimulation, as well addressing the issue of functional redundancy between the different PKD family members.
T21 0-353 Sentence denotes To investigate the biological role of PKDs we have generated DT40 B cell lines that lack expression of one or more members of the PKD family [1], allowing us to investigate the function(s) of PKD isoforms following B cell antigen receptor (BCR) stimulation, as well addressing the issue of functional redundancy between the different PKD family members.

bionlp-st-ge-2016-reference-tees

Id Subject Object Predicate Lexical cue
T1631 38-42 Protein denotes PKDs
T1632 130-133 Protein denotes PKD
T1633 192-195 Protein denotes PKD
T1634 215-238 Protein denotes B cell antigen receptor
T1635 240-243 Protein denotes BCR
T1636 334-352 Protein denotes PKD family members

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T991 240-243 P11274 denotes BCR