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PMC:1942070 / 103-344 JSONTXT

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pmc-enju-pas

Id Subject Object Predicate Lexical cue
T49 77-84 NN denotes protein
T50 85-91 NN denotes kinase
T51 92-93 NN denotes D
T52 94-95 -LRB- denotes (
T53 95-98 NN denotes PKD
T54 98-99 -RRB- denotes )
T55 100-107 NN denotes enzymes
T56 108-110 PRP denotes we
T57 111-120 VB denotes generated
T58 121-122 DT denotes a
T59 123-131 JJ denotes PKD-null
T60 132-136 NN denotes DT40
T61 137-149 NN denotes B-lymphocyte
T62 150-154 NN denotes cell
T63 155-159 NN denotes line
T64 161-171 RB denotes Previously
T65 172-174 PRP denotes we
T66 175-179 VB denotes have
T67 180-185 VB denotes shown
T68 186-190 IN denotes that
T69 191-195 NN denotes PKDs
T70 196-200 VB denotes have
T71 201-203 DT denotes an
T72 204-213 JJ denotes essential
T73 214-218 NN denotes role
T74 219-221 IN denotes in
T75 222-232 VB denotes regulating
T76 233-238 NN denotes class
T77 239-241 CD denotes II
T40 2-10 NN denotes activity
T41 11-13 IN denotes in
T42 14-24 NN denotes vertebrate
T43 25-32 NN denotes B-cells
T44 44-46 TO denotes To
T45 47-58 VB denotes investigate
T46 59-62 DT denotes the
T47 63-73 NN denotes importance
T48 74-76 IN denotes of
R9 T51 T52 arg1Of D,(
R10 T53 T52 arg2Of PKD,(
R11 T54 T52 arg3Of ),(
R15 T56 T57 arg1Of we,generated
R17 T63 T57 arg2Of line,generated
R18 T63 T58 arg1Of line,a
R19 T63 T59 arg1Of line,PKD-null
R20 T63 T60 arg1Of line,DT40
R21 T63 T61 arg1Of line,B-lymphocyte
R22 T63 T62 arg1Of line,cell
R23 T65 T66 arg1Of we,have
R24 T65 T67 arg1Of we,shown
R25 T67 T64 arg1Of shown,Previously
R26 T67 T66 arg2Of shown,have
R27 T69 T70 arg1Of PKDs,have
R28 T70 T67 arg2Of have,shown
R29 T70 T68 arg1Of have,that
R30 T70 T74 arg1Of have,in
R31 T73 T70 arg2Of role,have
R32 T73 T71 arg1Of role,an
R33 T73 T72 arg1Of role,essential
R34 T75 T74 arg2Of regulating,in
R7 T51 T49 arg1Of D,protein
R8 T51 T50 arg1Of D,kinase
R12 T55 T48 arg2Of enzymes,of
R13 T55 T51 arg1Of enzymes,D
R14 T56 T45 arg1Of we,investigate
R16 T57 T44 modOf generated,To
R390 T43 T41 arg2Of B-cells,in
R391 T43 T42 arg1Of B-cells,vertebrate
R392 T45 T44 arg1Of investigate,To
R393 T47 T45 arg2Of importance,investigate
R394 T47 T46 arg1Of importance,the
R395 T47 T48 arg1Of importance,of

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T226 2-10 NN denotes activity
T227 11-13 IN denotes in
T228 14-24 JJ denotes vertebrate
T229 25-32 NNPS denotes B-cells
T230 44-46 TO denotes To
T231 47-58 VB denotes investigate
T232 59-62 DT denotes the
T233 63-73 NN denotes importance
T234 74-76 IN denotes of
T235 77-84 NN denotes protein
T236 85-91 NN denotes kinase
T237 92-93 NNP denotes D
T238 94-95 -LRB- denotes (
T239 95-98 NNP denotes PKD
T240 98-99 -RRB- denotes )
T241 100-107 VBZ denotes enzymes
T242 108-110 PRP denotes we
T243 111-120 VBD denotes generated
T244 121-122 DT denotes a
T245 123-131 NNP denotes PKD-null
T246 132-136 NNP denotes DT40
T247 137-149 NNP denotes B-lymphocyte
T248 150-154 NN denotes cell
T249 155-159 NN denotes line
T250 159-160 . denotes .
T251 161-171 RB denotes Previously
T252 172-174 PRP denotes we
T253 175-179 VBP denotes have
T254 180-185 VBN denotes shown
T255 186-190 IN denotes that
T256 191-195 NNS denotes PKDs
T257 196-200 VBP denotes have
T258 201-203 DT denotes an
T259 204-213 JJ denotes essential
T260 214-218 NN denotes role
T261 219-221 IN denotes in
T262 222-232 VBG denotes regulating
T263 233-238 NN denotes class
T264 239-241 NNP denotes II
R204 T241 T231 dobj enzymes,investigate
R205 T242 T243 nsubj we,generated
R206 T243 T241 relcl generated,enzymes
R207 T244 T249 det a,line
R208 T245 T249 compound PKD-null,line
R209 T246 T247 compound DT40,B-lymphocyte
R210 T247 T249 compound B-lymphocyte,line
R211 T248 T249 compound cell,line
R212 T249 T243 dobj line,generated
R214 T251 T254 advmod Previously,shown
R215 T252 T254 nsubj we,shown
R216 T253 T254 aux have,shown
R217 T254 T254 ROOT shown,shown
R218 T255 T257 mark that,have
R219 T256 T257 nsubj PKDs,have
R220 T257 T254 ccomp have,shown
R221 T258 T260 det an,role
R222 T259 T260 amod essential,role
R223 T260 T257 dobj role,have
R224 T261 T260 prep in,role
R225 T262 T261 pcomp regulating,in
R190 T227 T226 prep in,activity
R191 T228 T229 amod vertebrate,B-cells
R192 T229 T227 pobj B-cells,in
R193 T230 T231 aux To,investigate
R195 T232 T233 det the,importance
R196 T233 T231 dobj importance,investigate
R197 T234 T233 prep of,importance
R198 T235 T234 pobj protein,of
R199 T236 T237 compound kinase,D
R200 T237 T235 appos D,protein
R201 T238 T237 punct (,D
R202 T239 T237 appos PKD,D
R203 T240 T237 punct ),D

UBERON-AE

Id Subject Object Predicate Lexical cue
T9 14-24 http://purl.obolibrary.org/obo/UBERON_3010224 denotes vertebrate

GO-CC

Id Subject Object Predicate Lexical cue
T399 27-32 http://purl.obolibrary.org/obo/GO_0005623 denotes cells

sentences

Id Subject Object Predicate Lexical cue
T15 44-160 Sentence denotes To investigate the importance of protein kinase D (PKD) enzymes we generated a PKD-null DT40 B-lymphocyte cell line.
T2 35-43 Sentence denotes Abstract
T3 44-160 Sentence denotes To investigate the importance of protein kinase D (PKD) enzymes we generated a PKD-null DT40 B-lymphocyte cell line.

bionlp-st-ge-2016-reference-tees

Id Subject Object Predicate Lexical cue
T432 77-93 Protein denotes protein kinase D
T433 95-98 Protein denotes PKD
T434 123-126 Protein denotes PKD
T435 191-195 Protein denotes PKDs