Id |
Subject |
Object |
Predicate |
Lexical cue |
T8526 |
0-5 |
CD |
denotes |
Three |
T8527 |
6-13 |
NNS |
denotes |
primers |
T8528 |
19-23 |
VBN |
denotes |
used |
T8529 |
14-18 |
VBD |
denotes |
were |
T8530 |
24-26 |
TO |
denotes |
to |
T8531 |
27-38 |
VB |
denotes |
distinguish |
T8532 |
39-43 |
JJ |
denotes |
wild |
T8533 |
44-48 |
NN |
denotes |
type |
T8534 |
43-44 |
HYPH |
denotes |
- |
T8535 |
60-67 |
NNS |
denotes |
alleles |
T8536 |
49-52 |
CC |
denotes |
and |
T8537 |
53-59 |
NN |
denotes |
mutant |
T8538 |
68-70 |
IN |
denotes |
of |
T8539 |
71-77 |
NN |
denotes |
Trip13 |
T8540 |
77-79 |
: |
denotes |
: |
T8541 |
79-85 |
NN |
denotes |
primer |
T8542 |
86-87 |
CD |
denotes |
1 |
T8543 |
87-89 |
, |
denotes |
, |
T8544 |
89-90 |
CD |
denotes |
5 |
T8545 |
92-113 |
NN |
denotes |
CGTCGCTCCATTGCTTTGTGC |
T8546 |
90-91 |
SYM |
denotes |
′ |
T8547 |
91-92 |
HYPH |
denotes |
- |
T8548 |
113-114 |
HYPH |
denotes |
- |
T8549 |
114-115 |
CD |
denotes |
3 |
T8550 |
115-116 |
SYM |
denotes |
′ |
T8551 |
116-117 |
: |
denotes |
; |
T8552 |
118-124 |
NN |
denotes |
primer |
T8553 |
125-126 |
CD |
denotes |
2 |
T8554 |
126-128 |
, |
denotes |
, |
T8555 |
128-129 |
CD |
denotes |
5 |
T8556 |
131-164 |
NN |
denotes |
AGTAGTGGTACACTGTATTTTTGCTTTCATTGA |
T8557 |
129-130 |
SYM |
denotes |
′ |
T8558 |
130-131 |
HYPH |
denotes |
- |
T8559 |
164-165 |
HYPH |
denotes |
- |
T8560 |
165-166 |
CD |
denotes |
3 |
T8561 |
166-167 |
SYM |
denotes |
′ |
T8562 |
167-168 |
: |
denotes |
; |
T8563 |
169-172 |
CC |
denotes |
and |
T8564 |
173-179 |
NN |
denotes |
primer |
T8565 |
180-181 |
CD |
denotes |
3 |
T8566 |
181-183 |
, |
denotes |
, |
T8567 |
183-184 |
CD |
denotes |
5 |
T8568 |
186-209 |
NN |
denotes |
GTAGATCCCGGCGCTCTTACCAA |
T8569 |
184-185 |
SYM |
denotes |
′ |
T8570 |
185-186 |
HYPH |
denotes |
- |
T8571 |
209-210 |
HYPH |
denotes |
- |
T8572 |
210-211 |
CD |
denotes |
3 |
T8573 |
211-212 |
SYM |
denotes |
′ |
T8574 |
212-213 |
. |
denotes |
. |
T8575 |
213-328 |
sentence |
denotes |
Primers 1 and 2 are located upstream and downstream, respectively, of the gene trap insertion within the intron 3. |
T8576 |
214-221 |
NNS |
denotes |
Primers |
T8577 |
222-223 |
CD |
denotes |
1 |
T8578 |
234-241 |
VBN |
denotes |
located |
T8579 |
224-227 |
CC |
denotes |
and |
T8580 |
228-229 |
CD |
denotes |
2 |
T8581 |
230-233 |
VBP |
denotes |
are |
T8582 |
242-250 |
RB |
denotes |
upstream |
T8583 |
251-254 |
CC |
denotes |
and |
T8584 |
255-265 |
RB |
denotes |
downstream |
T8585 |
265-267 |
, |
denotes |
, |
T8586 |
267-279 |
RB |
denotes |
respectively |
T8587 |
279-281 |
, |
denotes |
, |
T8588 |
281-283 |
IN |
denotes |
of |
T8589 |
284-287 |
DT |
denotes |
the |
T8590 |
298-307 |
NN |
denotes |
insertion |
T8591 |
288-292 |
NN |
denotes |
gene |
T8592 |
293-297 |
NN |
denotes |
trap |
T8593 |
308-314 |
IN |
denotes |
within |
T8594 |
315-318 |
DT |
denotes |
the |
T8595 |
319-325 |
NN |
denotes |
intron |
T8596 |
326-327 |
CD |
denotes |
3 |
T8597 |
327-328 |
. |
denotes |
. |
T8598 |
328-369 |
sentence |
denotes |
Primer 3 corresponds to pGTlxf sequence. |
T8599 |
329-335 |
NN |
denotes |
Primer |
T8600 |
338-349 |
VBZ |
denotes |
corresponds |
T8601 |
336-337 |
CD |
denotes |
3 |
T8602 |
350-352 |
IN |
denotes |
to |
T8603 |
353-359 |
NN |
denotes |
pGTlxf |
T8604 |
360-368 |
NN |
denotes |
sequence |
T8605 |
368-369 |
. |
denotes |
. |
T8606 |
369-496 |
sentence |
denotes |
Primers 1 and 2 amplify a 700-bp band from a wild-type allele; primers 1 and 3 amplify a 540-bp fragment from a mutant allele. |
T8607 |
370-377 |
NNS |
denotes |
Primers |
T8608 |
378-379 |
CD |
denotes |
1 |
T8609 |
386-393 |
VBP |
denotes |
amplify |
T8610 |
380-383 |
CC |
denotes |
and |
T8611 |
384-385 |
CD |
denotes |
2 |
T8612 |
449-456 |
VBP |
denotes |
amplify |
T8613 |
394-395 |
DT |
denotes |
a |
T8614 |
403-407 |
NN |
denotes |
band |
T8615 |
396-399 |
CD |
denotes |
700 |
T8616 |
400-402 |
NN |
denotes |
bp |
T8617 |
399-400 |
HYPH |
denotes |
- |
T8618 |
408-412 |
IN |
denotes |
from |
T8619 |
413-414 |
DT |
denotes |
a |
T8620 |
425-431 |
NN |
denotes |
allele |
T8621 |
415-419 |
JJ |
denotes |
wild |
T8622 |
420-424 |
NN |
denotes |
type |
T8623 |
419-420 |
HYPH |
denotes |
- |
T8624 |
431-432 |
: |
denotes |
; |
T8625 |
433-440 |
NNS |
denotes |
primers |
T8626 |
441-442 |
CD |
denotes |
1 |
T8627 |
443-446 |
CC |
denotes |
and |
T8628 |
447-448 |
CD |
denotes |
3 |
T8629 |
457-458 |
DT |
denotes |
a |
T8630 |
466-474 |
NN |
denotes |
fragment |
T8631 |
459-462 |
CD |
denotes |
540 |
T8632 |
463-465 |
NN |
denotes |
bp |
T8633 |
462-463 |
HYPH |
denotes |
- |
T8634 |
475-479 |
IN |
denotes |
from |
T8635 |
480-481 |
DT |
denotes |
a |
T8636 |
489-495 |
NN |
denotes |
allele |
T8637 |
482-488 |
NN |
denotes |
mutant |
T8638 |
495-496 |
. |
denotes |
. |
T8639 |
496-594 |
sentence |
denotes |
Separate reactions were used to assay the presence or absence of each amplicon from a DNA sample. |
T8640 |
497-505 |
JJ |
denotes |
Separate |
T8641 |
506-515 |
NNS |
denotes |
reactions |
T8642 |
521-525 |
VBN |
denotes |
used |
T8643 |
516-520 |
VBD |
denotes |
were |
T8644 |
526-528 |
TO |
denotes |
to |
T8645 |
529-534 |
VB |
denotes |
assay |
T8646 |
535-538 |
DT |
denotes |
the |
T8647 |
539-547 |
NN |
denotes |
presence |
T8648 |
548-550 |
CC |
denotes |
or |
T8649 |
551-558 |
NN |
denotes |
absence |
T8650 |
559-561 |
IN |
denotes |
of |
T8651 |
562-566 |
DT |
denotes |
each |
T8652 |
567-575 |
NN |
denotes |
amplicon |
T8653 |
576-580 |
IN |
denotes |
from |
T8654 |
581-582 |
DT |
denotes |
a |
T8655 |
587-593 |
NN |
denotes |
sample |
T8656 |
583-586 |
NN |
denotes |
DNA |
T8657 |
593-594 |
. |
denotes |
. |
T8658 |
594-705 |
sentence |
denotes |
The cycling conditions were: 94 °C 2 min; 35 cycles of 94 °C 30 s, 57 °C 45 s, and 72°C 50 s; and 72 °C 2 min. |
T8659 |
595-598 |
DT |
denotes |
The |
T8660 |
607-617 |
NNS |
denotes |
conditions |
T8661 |
599-606 |
NN |
denotes |
cycling |
T8662 |
618-622 |
VBD |
denotes |
were |
T8663 |
622-624 |
: |
denotes |
: |
T8664 |
624-626 |
CD |
denotes |
94 |
T8665 |
627-629 |
NN |
denotes |
°C |
T8666 |
630-631 |
CD |
denotes |
2 |
T8667 |
632-635 |
NN |
denotes |
min |
T8668 |
635-636 |
: |
denotes |
; |
T8669 |
637-639 |
CD |
denotes |
35 |
T8670 |
640-646 |
NNS |
denotes |
cycles |
T8671 |
647-649 |
IN |
denotes |
of |
T8672 |
650-652 |
CD |
denotes |
94 |
T8673 |
653-655 |
NN |
denotes |
°C |
T8674 |
656-658 |
CD |
denotes |
30 |
T8675 |
659-660 |
NN |
denotes |
s |
T8676 |
660-662 |
, |
denotes |
, |
T8677 |
662-664 |
CD |
denotes |
57 |
T8678 |
665-667 |
NN |
denotes |
°C |
T8679 |
668-670 |
CD |
denotes |
45 |
T8680 |
671-672 |
NN |
denotes |
s |
T8681 |
672-674 |
, |
denotes |
, |
T8682 |
674-677 |
CC |
denotes |
and |
T8683 |
678-680 |
CD |
denotes |
72 |
T8684 |
680-682 |
NN |
denotes |
°C |
T8685 |
683-685 |
CD |
denotes |
50 |
T8686 |
686-687 |
NN |
denotes |
s |
T8687 |
687-688 |
: |
denotes |
; |
T8688 |
689-692 |
CC |
denotes |
and |
T8689 |
693-695 |
CD |
denotes |
72 |
T8690 |
696-698 |
NN |
denotes |
°C |
T8691 |
699-700 |
CD |
denotes |
2 |
T8692 |
701-704 |
NN |
denotes |
min |
T8693 |
704-705 |
. |
denotes |
. |
R5713 |
T8526 |
T8527 |
nummod |
Three,primers |
R5714 |
T8527 |
T8528 |
nsubjpass |
primers,used |
R5715 |
T8529 |
T8528 |
auxpass |
were,used |
R5716 |
T8530 |
T8531 |
aux |
to,distinguish |
R5717 |
T8531 |
T8528 |
advcl |
distinguish,used |
R5718 |
T8532 |
T8533 |
amod |
wild,type |
R5719 |
T8533 |
T8535 |
nmod |
type,alleles |
R5720 |
T8534 |
T8533 |
punct |
-,type |
R5721 |
T8535 |
T8531 |
dobj |
alleles,distinguish |
R5722 |
T8536 |
T8533 |
cc |
and,type |
R5723 |
T8537 |
T8533 |
conj |
mutant,type |
R5724 |
T8538 |
T8535 |
prep |
of,alleles |
R5725 |
T8539 |
T8538 |
pobj |
Trip13,of |
R5726 |
T8540 |
T8535 |
punct |
: ,alleles |
R5727 |
T8541 |
T8535 |
appos |
primer,alleles |
R5728 |
T8542 |
T8541 |
nummod |
1,primer |
R5729 |
T8543 |
T8541 |
punct |
", ",primer |
R5730 |
T8544 |
T8545 |
nummod |
5,CGTCGCTCCATTGCTTTGTGC |
R5731 |
T8545 |
T8541 |
appos |
CGTCGCTCCATTGCTTTGTGC,primer |
R5732 |
T8546 |
T8544 |
punct |
′,5 |
R5733 |
T8547 |
T8545 |
punct |
-,CGTCGCTCCATTGCTTTGTGC |
R5734 |
T8548 |
T8545 |
punct |
-,CGTCGCTCCATTGCTTTGTGC |
R5735 |
T8549 |
T8545 |
nummod |
3,CGTCGCTCCATTGCTTTGTGC |
R5736 |
T8550 |
T8545 |
punct |
′,CGTCGCTCCATTGCTTTGTGC |
R5737 |
T8551 |
T8541 |
punct |
;,primer |
R5738 |
T8552 |
T8541 |
conj |
primer,primer |
R5739 |
T8553 |
T8552 |
nummod |
2,primer |
R5740 |
T8554 |
T8552 |
punct |
", ",primer |
R5741 |
T8555 |
T8556 |
nummod |
5,AGTAGTGGTACACTGTATTTTTGCTTTCATTGA |
R5742 |
T8556 |
T8552 |
appos |
AGTAGTGGTACACTGTATTTTTGCTTTCATTGA,primer |
R5743 |
T8557 |
T8555 |
punct |
′,5 |
R5744 |
T8558 |
T8556 |
punct |
-,AGTAGTGGTACACTGTATTTTTGCTTTCATTGA |
R5745 |
T8559 |
T8556 |
punct |
-,AGTAGTGGTACACTGTATTTTTGCTTTCATTGA |
R5746 |
T8560 |
T8556 |
nummod |
3,AGTAGTGGTACACTGTATTTTTGCTTTCATTGA |
R5747 |
T8561 |
T8556 |
punct |
′,AGTAGTGGTACACTGTATTTTTGCTTTCATTGA |
R5748 |
T8562 |
T8552 |
punct |
;,primer |
R5749 |
T8563 |
T8552 |
cc |
and,primer |
R5750 |
T8564 |
T8552 |
conj |
primer,primer |
R5751 |
T8565 |
T8564 |
nummod |
3,primer |
R5752 |
T8566 |
T8564 |
punct |
", ",primer |
R5753 |
T8567 |
T8568 |
nummod |
5,GTAGATCCCGGCGCTCTTACCAA |
R5754 |
T8568 |
T8564 |
appos |
GTAGATCCCGGCGCTCTTACCAA,primer |
R5755 |
T8569 |
T8567 |
punct |
′,5 |
R5756 |
T8570 |
T8568 |
punct |
-,GTAGATCCCGGCGCTCTTACCAA |
R5757 |
T8571 |
T8568 |
punct |
-,GTAGATCCCGGCGCTCTTACCAA |
R5758 |
T8572 |
T8568 |
nummod |
3,GTAGATCCCGGCGCTCTTACCAA |
R5759 |
T8573 |
T8568 |
punct |
′,GTAGATCCCGGCGCTCTTACCAA |
R5760 |
T8574 |
T8528 |
punct |
.,used |
R5761 |
T8576 |
T8577 |
nmod |
Primers,1 |
R5762 |
T8577 |
T8578 |
nsubjpass |
1,located |
R5763 |
T8579 |
T8577 |
cc |
and,1 |
R5764 |
T8580 |
T8577 |
conj |
2,1 |
R5765 |
T8581 |
T8578 |
auxpass |
are,located |
R5766 |
T8582 |
T8578 |
advmod |
upstream,located |
R5767 |
T8583 |
T8582 |
cc |
and,upstream |
R5768 |
T8584 |
T8582 |
conj |
downstream,upstream |
R5769 |
T8585 |
T8584 |
punct |
", ",downstream |
R5770 |
T8586 |
T8584 |
conj |
respectively,downstream |
R5771 |
T8587 |
T8586 |
punct |
", ",respectively |
R5772 |
T8588 |
T8586 |
conj |
of,respectively |
R5773 |
T8589 |
T8590 |
det |
the,insertion |
R5774 |
T8590 |
T8588 |
pobj |
insertion,of |
R5775 |
T8591 |
T8592 |
compound |
gene,trap |
R5776 |
T8592 |
T8590 |
compound |
trap,insertion |
R5777 |
T8593 |
T8590 |
prep |
within,insertion |
R5778 |
T8594 |
T8595 |
det |
the,intron |
R5779 |
T8595 |
T8593 |
pobj |
intron,within |
R5780 |
T8596 |
T8595 |
nummod |
3,intron |
R5781 |
T8597 |
T8578 |
punct |
.,located |
R5782 |
T8599 |
T8600 |
nsubj |
Primer,corresponds |
R5783 |
T8601 |
T8599 |
nummod |
3,Primer |
R5784 |
T8602 |
T8600 |
prep |
to,corresponds |
R5785 |
T8603 |
T8604 |
compound |
pGTlxf,sequence |
R5786 |
T8604 |
T8602 |
pobj |
sequence,to |
R5787 |
T8605 |
T8600 |
punct |
.,corresponds |
R5788 |
T8607 |
T8608 |
nmod |
Primers,1 |
R5789 |
T8608 |
T8609 |
nsubj |
1,amplify |
R5790 |
T8609 |
T8612 |
ccomp |
amplify,amplify |
R5791 |
T8610 |
T8608 |
cc |
and,1 |
R5792 |
T8611 |
T8608 |
conj |
2,1 |
R5793 |
T8613 |
T8614 |
det |
a,band |
R5794 |
T8614 |
T8609 |
dobj |
band,amplify |
R5795 |
T8615 |
T8616 |
nummod |
700,bp |
R5796 |
T8616 |
T8614 |
compound |
bp,band |
R5797 |
T8617 |
T8616 |
punct |
-,bp |
R5798 |
T8618 |
T8614 |
prep |
from,band |
R5799 |
T8619 |
T8620 |
det |
a,allele |
R5800 |
T8620 |
T8618 |
pobj |
allele,from |
R5801 |
T8621 |
T8622 |
amod |
wild,type |
R5802 |
T8622 |
T8620 |
compound |
type,allele |
R5803 |
T8623 |
T8622 |
punct |
-,type |
R5804 |
T8624 |
T8612 |
punct |
;,amplify |
R5805 |
T8625 |
T8626 |
nmod |
primers,1 |
R5806 |
T8626 |
T8612 |
nsubj |
1,amplify |
R5807 |
T8627 |
T8626 |
cc |
and,1 |
R5808 |
T8628 |
T8626 |
conj |
3,1 |
R5809 |
T8629 |
T8630 |
det |
a,fragment |
R5810 |
T8630 |
T8612 |
dobj |
fragment,amplify |
R5811 |
T8631 |
T8632 |
nummod |
540,bp |
R5812 |
T8632 |
T8630 |
compound |
bp,fragment |
R5813 |
T8633 |
T8632 |
punct |
-,bp |
R5814 |
T8634 |
T8630 |
prep |
from,fragment |
R5815 |
T8635 |
T8636 |
det |
a,allele |
R5816 |
T8636 |
T8634 |
pobj |
allele,from |
R5817 |
T8637 |
T8636 |
compound |
mutant,allele |
R5818 |
T8638 |
T8612 |
punct |
.,amplify |
R5819 |
T8640 |
T8641 |
amod |
Separate,reactions |
R5820 |
T8641 |
T8642 |
nsubjpass |
reactions,used |
R5821 |
T8643 |
T8642 |
auxpass |
were,used |
R5822 |
T8644 |
T8645 |
aux |
to,assay |
R5823 |
T8645 |
T8642 |
advcl |
assay,used |
R5824 |
T8646 |
T8647 |
det |
the,presence |
R5825 |
T8647 |
T8645 |
dobj |
presence,assay |
R5826 |
T8648 |
T8647 |
cc |
or,presence |
R5827 |
T8649 |
T8647 |
conj |
absence,presence |
R5828 |
T8650 |
T8647 |
prep |
of,presence |
R5829 |
T8651 |
T8652 |
det |
each,amplicon |
R5830 |
T8652 |
T8650 |
pobj |
amplicon,of |
R5831 |
T8653 |
T8645 |
prep |
from,assay |
R5832 |
T8654 |
T8655 |
det |
a,sample |
R5833 |
T8655 |
T8653 |
pobj |
sample,from |
R5834 |
T8656 |
T8655 |
compound |
DNA,sample |
R5835 |
T8657 |
T8642 |
punct |
.,used |
R5836 |
T8659 |
T8660 |
det |
The,conditions |
R5837 |
T8660 |
T8662 |
nsubj |
conditions,were |
R5838 |
T8661 |
T8660 |
compound |
cycling,conditions |
R5839 |
T8663 |
T8662 |
punct |
: ,were |
R5840 |
T8664 |
T8665 |
nummod |
94,°C |
R5841 |
T8665 |
T8662 |
attr |
°C,were |
R5842 |
T8666 |
T8667 |
nummod |
2,min |
R5843 |
T8667 |
T8665 |
npadvmod |
min,°C |
R5844 |
T8668 |
T8665 |
punct |
;,°C |
R5845 |
T8669 |
T8670 |
nummod |
35,cycles |
R5846 |
T8670 |
T8665 |
conj |
cycles,°C |
R5847 |
T8671 |
T8670 |
prep |
of,cycles |
R5848 |
T8672 |
T8673 |
nummod |
94,°C |
R5849 |
T8673 |
T8671 |
pobj |
°C,of |
R5850 |
T8674 |
T8675 |
nummod |
30,s |
R5851 |
T8675 |
T8670 |
npadvmod |
s,cycles |
R5852 |
T8676 |
T8670 |
punct |
", ",cycles |
R5853 |
T8677 |
T8678 |
nummod |
57,°C |
R5854 |
T8678 |
T8670 |
conj |
°C,cycles |
R5855 |
T8679 |
T8680 |
nummod |
45,s |
R5856 |
T8680 |
T8678 |
npadvmod |
s,°C |
R5857 |
T8681 |
T8678 |
punct |
", ",°C |
R5858 |
T8682 |
T8678 |
cc |
and,°C |
R5859 |
T8683 |
T8684 |
nummod |
72,°C |
R5860 |
T8684 |
T8678 |
conj |
°C,°C |
R5861 |
T8685 |
T8686 |
nummod |
50,s |
R5862 |
T8686 |
T8684 |
npadvmod |
s,°C |
R5863 |
T8687 |
T8670 |
punct |
;,cycles |
R5864 |
T8688 |
T8670 |
cc |
and,cycles |
R5865 |
T8689 |
T8690 |
nummod |
72,°C |
R5866 |
T8690 |
T8670 |
conj |
°C,cycles |
R5867 |
T8691 |
T8692 |
nummod |
2,min |
R5868 |
T8692 |
T8690 |
npadvmod |
min,°C |
R5869 |
T8693 |
T8662 |
punct |
.,were |