PMC:1941754 / 40077-40169 JSON TXT

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Id	Subject	Object	Predicate	Lexical cue
T8394	0-92	sentence	denotes	The gene-trapped locus creates a fusion transcript containing exons 1–3 of Trip13 and βgeo.
T8395	1-4	DT	denotes	The
T8396	18-23	NN	denotes	locus
T8397	5-9	NN	denotes	gene
T8398	10-17	VBN	denotes	trapped
T8399	9-10	HYPH	denotes	-
T8400	24-31	VBZ	denotes	creates
T8401	32-33	DT	denotes	a
T8402	41-51	NN	denotes	transcript
T8403	34-40	NN	denotes	fusion
T8404	52-62	VBG	denotes	containing
T8405	63-68	NNS	denotes	exons
T8406	71-72	CD	denotes	3
T8407	69-70	CD	denotes	1
T8408	70-71	SYM	denotes	–
T8409	73-75	IN	denotes	of
T8410	76-82	NN	denotes	Trip13
T8411	83-86	CC	denotes	and
T8412	87-91	NN	denotes	βgeo
T8413	91-92	.	denotes	.
R5632	T8395	T8396	det	The,locus
R5633	T8396	T8400	nsubj	locus,creates
R5634	T8397	T8398	npadvmod	gene,trapped
R5635	T8398	T8396	amod	trapped,locus
R5636	T8399	T8398	punct	-,trapped
R5637	T8401	T8402	det	a,transcript
R5638	T8402	T8400	dobj	transcript,creates
R5639	T8403	T8402	compound	fusion,transcript
R5640	T8404	T8402	acl	containing,transcript
R5641	T8405	T8406	nmod	exons,3
R5642	T8406	T8404	dobj	3,containing
R5643	T8407	T8406	nummod	1,3
R5644	T8408	T8406	punct	–,3
R5645	T8409	T8406	prep	of,3
R5646	T8410	T8409	pobj	Trip13,of
R5647	T8411	T8410	cc	and,Trip13
R5648	T8412	T8410	conj	βgeo,Trip13
R5649	T8413	T8400	punct	.,creates

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id	Subject	Object	Predicate	Lexical cue
T8257	5-9	SO:0000704	denotes	gene
T8258	34-51	SO:0001886	denotes	fusion transcript
T8259	63-68	SO:0000147	denotes	exons
T8260	76-82	PR:000016672	denotes	Trip13

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id	Subject	Object	Predicate	Lexical cue
T8292	5-17	SO_EXT:gene_trapping_process	denotes	gene-trapped
T8293	34-51	SO_EXT:0001886	denotes	fusion transcript
T8294	63-68	SO_EXT:0000147	denotes	exons
T8295	76-82	PR_EXT:000016672	denotes	Trip13
T8296	87-91	GO_EXT:beta_geo	denotes	βgeo