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PMC:1941754 / 38068-38327 JSONTXT

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craft-sa-dev

Id Subject Object Predicate Lexical cue
T7918 0-259 sentence denotes One possible candidate is Dot1 (PCH1 in yeast), a histone methyltransferase silencing factor that is required for pachytene arrest of zip1 and dmc1 mutants in yeast [58], and for preventing RAD54-mediated recombinational DSB repair between sister chromatids.
T7919 1-4 CD denotes One
T7920 14-23 NN denotes candidate
T7921 5-13 JJ denotes possible
T7922 24-26 VBZ denotes is
T7923 27-31 NN denotes Dot1
T7924 32-33 -LRB- denotes (
T7925 33-37 NN denotes PCH1
T7926 38-40 IN denotes in
T7927 41-46 NN denotes yeast
T7928 46-47 -RRB- denotes )
T7929 47-49 , denotes ,
T7930 49-50 DT denotes a
T7931 87-93 NN denotes factor
T7932 51-58 NN denotes histone
T7933 59-76 NN denotes methyltransferase
T7934 77-86 NN denotes silencing
T7935 94-98 WDT denotes that
T7936 102-110 VBN denotes required
T7937 99-101 VBZ denotes is
T7938 111-114 IN denotes for
T7939 115-124 NN denotes pachytene
T7940 125-131 NN denotes arrest
T7941 132-134 IN denotes of
T7942 135-139 NN denotes zip1
T7943 149-156 NNS denotes mutants
T7944 140-143 CC denotes and
T7945 144-148 NN denotes dmc1
T7946 157-159 IN denotes in
T7947 160-165 NN denotes yeast
T7948 166-167 -LRB- denotes [
T7949 167-169 CD denotes 58
T7950 169-170 -RRB- denotes ]
T7951 170-172 , denotes ,
T7952 172-175 CC denotes and
T7953 176-179 IN denotes for
T7954 180-190 VBG denotes preventing
T7955 191-196 NN denotes RAD54
T7956 197-205 VBN denotes mediated
T7957 196-197 HYPH denotes -
T7958 226-232 NN denotes repair
T7959 206-221 JJ denotes recombinational
T7960 222-225 NN denotes DSB
T7961 233-240 IN denotes between
T7962 241-247 NN denotes sister
T7963 248-258 NNS denotes chromatids
T7964 258-259 . denotes .
R5284 T7919 T7920 nummod One,candidate
R5286 T7920 T7922 nsubj candidate,is
R5288 T7921 T7920 amod possible,candidate
R5291 T7923 T7922 attr Dot1,is
R5295 T7924 T7923 punct (,Dot1
R5299 T7925 T7923 appos PCH1,Dot1
R5302 T7926 T7925 prep in,PCH1
R5304 T7927 T7926 pobj yeast,in
R5306 T7928 T7923 punct ),Dot1
R5310 T7929 T7923 punct ", ",Dot1
R5314 T7930 T7931 det a,factor
R5317 T7931 T7923 appos factor,Dot1
R5321 T7932 T7933 compound histone,methyltransferase
R5325 T7933 T7934 compound methyltransferase,silencing
R5327 T7934 T7931 compound silencing,factor
R5331 T7935 T7936 dep that,required
R5333 T7936 T7931 relcl required,factor
R5335 T7937 T7936 auxpass is,required
R5341 T7938 T7936 prep for,required
R5342 T7939 T7940 compound pachytene,arrest
R5344 T7940 T7938 pobj arrest,for
R5348 T7941 T7940 prep of,arrest
R5352 T7942 T7943 nmod zip1,mutants
R5355 T7943 T7941 pobj mutants,of
R5359 T7944 T7942 cc and,zip1
R5361 T7945 T7942 conj dmc1,zip1
R5364 T7946 T7940 prep in,arrest
R5367 T7947 T7946 pobj yeast,in
R5371 T7948 T7949 punct [,58
R5374 T7949 T7940 parataxis 58,arrest
R5377 T7950 T7949 punct ],58
R5380 T7951 T7938 punct ", ",for
R5384 T7952 T7938 cc and,for
R5387 T7953 T7938 conj for,for
R5394 T7954 T7953 pcomp preventing,for
R5398 T7955 T7956 npadvmod RAD54,mediated
R5401 T7956 T7958 amod mediated,repair
R5402 T7957 T7956 punct -,mediated
R5403 T7958 T7954 dobj repair,preventing
R5404 T7959 T7960 amod recombinational,DSB
R5406 T7960 T7958 compound DSB,repair
R5409 T7961 T7958 prep between,repair
R5413 T7962 T7963 compound sister,chromatids
R5416 T7963 T7961 pobj chromatids,between
R5419 T7964 T7922 punct .,is

craft-ca-core-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T6189 27-31 PR:Q9SIH2 denotes Dot1
T6190 33-37 PR:Q04089 denotes PCH1
T6191 51-58 PR:000043452 denotes histone
T6192 51-58 CHEBI:15358 denotes histone
T6193 77-86 GO:0016458 denotes silencing
T6194 115-124 GO:0000239 denotes pachytene
T6195 135-139 PR:P31111 denotes zip1
T6196 144-148 PR:000006536 denotes dmc1
T6197 191-196 PR:000013680 denotes RAD54
T6198 206-221 _FRAGMENT denotes recombinational
T6199 226-232 GO:0000725 denotes repair
T6200 222-232 GO:0006302 denotes DSB repair
R3996 T6199 T6198 _lexicallyChainedTo repair,recombinational

2_test

Id Subject Object Predicate Lexical cue
17696610-11029058-85497953 167-169 11029058 denotes 58
T54062 167-169 11029058 denotes 58

craft-ca-core-ex-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T6518 27-31 PR_EXT:Q9SIH2 denotes Dot1
T6519 33-37 PR_EXT:Q04089 denotes PCH1
T6520 41-46 NCBITaxon_EXT:yeast denotes yeast
T6521 51-58 PR_EXT:000043452 denotes histone
T6522 51-58 CHEBI:15358 denotes histone
T6523 51-76 GO_EXT:0042054 denotes histone methyltransferase
T6524 77-86 GO:0016458 denotes silencing
T6525 115-124 GO:0000239 denotes pachytene
T6526 135-139 PR_EXT:P31111 denotes zip1
T6527 144-148 PR_EXT:000006536 denotes dmc1
T6528 149-156 SO_EXT:sequence_altered_entity denotes mutants
T6529 160-165 NCBITaxon_EXT:yeast denotes yeast
T6530 191-196 PR_EXT:000013680 denotes RAD54
T6531 206-221 GO_SO_EXT:sequence_rearrangement_process denotes recombinational
T6532 206-221 _FRAGMENT denotes recombinational
T6533 226-232 GO:0000725 denotes repair
T6534 222-232 GO:0006302 denotes DSB repair
R4004 T6533 T6532 _lexicallyChainedTo repair,recombinational