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PMC:1941754 / 26434-26774 JSONTXT

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craft-sa-dev

Id Subject Object Predicate Lexical cue
T5120 0-340 sentence denotes In contrast to the complete synapsis in Trip13Gt/Gt pachytene spermatocytes (Figure 5A), in which SPO11 is available in leptonema to initiate (via DSB induction, Figure S2A and S2B) a recombination-driven homolog search, chromosome synapsis in doubly mutant spermatocytes was highly disrupted as in Spo11 single mutants (Figure 5B and 5C).
T5121 1-3 IN denotes In
T5122 284-293 VBN denotes disrupted
T5123 4-12 NN denotes contrast
T5124 13-15 IN denotes to
T5125 16-19 DT denotes the
T5126 29-37 NN denotes synapsis
T5127 20-28 JJ denotes complete
T5128 38-40 IN denotes in
T5129 41-49 NN denotes Trip13Gt
T5130 50-52 NN denotes Gt
T5131 49-50 HYPH denotes /
T5132 53-62 NN denotes pachytene
T5133 63-76 NNS denotes spermatocytes
T5134 77-78 -LRB- denotes (
T5135 85-87 NN denotes 5A
T5136 78-84 NN denotes Figure
T5137 87-88 -RRB- denotes )
T5138 88-90 , denotes ,
T5139 90-92 IN denotes in
T5140 105-107 VBZ denotes is
T5141 93-98 WDT denotes which
T5142 99-104 NN denotes SPO11
T5143 108-117 JJ denotes available
T5144 118-120 IN denotes in
T5145 121-130 NN denotes leptonema
T5146 131-133 TO denotes to
T5147 134-142 VB denotes initiate
T5148 143-144 -LRB- denotes (
T5149 170-173 NN denotes S2A
T5150 144-147 IN denotes via
T5151 148-151 NN denotes DSB
T5152 152-161 NN denotes induction
T5153 161-163 , denotes ,
T5154 163-169 NN denotes Figure
T5155 174-177 CC denotes and
T5156 178-181 NN denotes S2B
T5157 181-182 -RRB- denotes )
T5158 183-184 DT denotes a
T5159 214-220 NN denotes search
T5160 185-198 NN denotes recombination
T5161 199-205 VBN denotes driven
T5162 198-199 HYPH denotes -
T5163 206-213 NN denotes homolog
T5164 220-222 , denotes ,
T5165 222-232 NN denotes chromosome
T5166 233-241 NN denotes synapsis
T5167 242-244 IN denotes in
T5168 245-251 RB denotes doubly
T5169 252-258 JJ denotes mutant
T5170 259-272 NNS denotes spermatocytes
T5171 273-276 VBD denotes was
T5172 277-283 RB denotes highly
T5173 294-296 IN denotes as
T5174 297-299 IN denotes in
T5175 300-305 NN denotes Spo11
T5176 313-320 NNS denotes mutants
T5177 306-312 JJ denotes single
T5178 321-322 -LRB- denotes (
T5179 329-331 NN denotes 5B
T5180 322-328 NN denotes Figure
T5181 332-335 CC denotes and
T5182 336-338 NN denotes 5C
T5183 338-339 -RRB- denotes )
T5184 339-340 . denotes .
R3259 T5121 T5122 prep In,disrupted
R3260 T5123 T5121 pobj contrast,In
R3261 T5124 T5123 prep to,contrast
R3262 T5125 T5126 det the,synapsis
R3263 T5126 T5124 pobj synapsis,to
R3264 T5127 T5126 amod complete,synapsis
R3265 T5128 T5126 prep in,synapsis
R3266 T5129 T5130 compound Trip13Gt,Gt
R3267 T5130 T5132 compound Gt,pachytene
R3268 T5131 T5130 punct /,Gt
R3269 T5132 T5133 compound pachytene,spermatocytes
R3270 T5133 T5128 pobj spermatocytes,in
R3271 T5134 T5135 punct (,5A
R3272 T5135 T5126 parataxis 5A,synapsis
R3273 T5136 T5135 compound Figure,5A
R3274 T5137 T5135 punct ),5A
R3275 T5138 T5126 punct ", ",synapsis
R3276 T5139 T5140 prep in,is
R3277 T5140 T5126 relcl is,synapsis
R3278 T5141 T5139 pobj which,in
R3279 T5142 T5140 nsubj SPO11,is
R3280 T5143 T5140 acomp available,is
R3281 T5144 T5140 prep in,is
R3282 T5145 T5144 pobj leptonema,in
R3283 T5146 T5147 aux to,initiate
R3284 T5147 T5140 advcl initiate,is
R3285 T5148 T5149 punct (,S2A
R3286 T5149 T5147 parataxis S2A,initiate
R3287 T5150 T5149 prep via,S2A
R3288 T5151 T5152 compound DSB,induction
R3289 T5152 T5150 pobj induction,via
R3290 T5153 T5149 punct ", ",S2A
R3291 T5154 T5149 compound Figure,S2A
R3292 T5155 T5149 cc and,S2A
R3293 T5156 T5149 conj S2B,S2A
R3294 T5157 T5149 punct ),S2A
R3295 T5158 T5159 det a,search
R3296 T5159 T5147 dobj search,initiate
R3297 T5160 T5161 npadvmod recombination,driven
R3298 T5161 T5159 amod driven,search
R3299 T5162 T5161 punct -,driven
R3300 T5163 T5159 compound homolog,search
R3301 T5164 T5122 punct ", ",disrupted
R3302 T5165 T5166 compound chromosome,synapsis
R3303 T5166 T5122 nsubjpass synapsis,disrupted
R3304 T5167 T5166 prep in,synapsis
R3305 T5168 T5169 advmod doubly,mutant
R3306 T5169 T5170 amod mutant,spermatocytes
R3307 T5170 T5167 pobj spermatocytes,in
R3308 T5171 T5122 auxpass was,disrupted
R3309 T5172 T5122 advmod highly,disrupted
R3310 T5173 T5122 prep as,disrupted
R3311 T5174 T5173 prep in,as
R3312 T5175 T5176 nmod Spo11,mutants
R3313 T5176 T5174 pobj mutants,in
R3314 T5177 T5176 amod single,mutants
R3315 T5178 T5179 punct (,5B
R3317 T5180 T5179 compound Figure,5B
R3316 T5179 T5122 parataxis 5B,disrupted
R3318 T5181 T5179 cc and,5B
R3319 T5182 T5179 conj 5C,5B
R3320 T5183 T5179 punct ),5B
R3321 T5184 T5122 punct .,disrupted

craft-ca-core-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T4621 29-37 GO:0007129 denotes synapsis
T4622 41-47 PR:000016672 denotes Trip13
T4623 53-62 GO:0000239 denotes pachytene
T4624 63-76 CL:0000017 denotes spermatocytes
T4625 99-104 PR:000015553 denotes SPO11
T4626 121-130 GO:0000237 denotes leptonema
T4627 222-241 GO:0007129 denotes chromosome synapsis
T4628 259-272 CL:0000017 denotes spermatocytes
T4629 300-305 PR:000015553 denotes Spo11

craft-ca-core-ex-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T4773 29-37 GO:0007129 denotes synapsis
T4774 41-47 PR_EXT:000016672 denotes Trip13
T4775 53-62 GO:0000239 denotes pachytene
T4776 63-76 CL:0000017 denotes spermatocytes
T4777 99-104 PR_EXT:000015553 denotes SPO11
T4778 121-130 GO:0000237 denotes leptonema
T4779 185-198 GO_SO_EXT:sequence_rearrangement_process denotes recombination
T4780 222-232 GO_SO_EXT:chromosome denotes chromosome
T4781 222-241 GO:0007129 denotes chromosome synapsis
T4782 252-258 SO_EXT:sequence_altered_entity_or_alteration_process denotes mutant
T4783 259-272 CL:0000017 denotes spermatocytes
T4784 300-305 PR_EXT:000015553 denotes Spo11
T4785 313-320 SO_EXT:sequence_altered_entity denotes mutants