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PMC:1941754 / 13044-13771 JSONTXT

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Id Subject Object Predicate Lexical cue
T2315 0-11 NNS denotes Homozygotes
T2316 26-29 VBD denotes had
T2317 12-14 IN denotes of
T2318 15-19 DT denotes both
T2319 20-25 NNS denotes sexes
T2320 30-35 JJ denotes small
T2321 36-42 NNS denotes gonads
T2322 43-44 -LRB- denotes (
T2323 51-53 NN denotes 2C
T2324 44-50 NN denotes Figure
T2325 53-54 : denotes ;
T2326 55-58 VB denotes see
T2327 59-64 RB denotes below
T2328 64-65 -RRB- denotes )
T2329 66-69 CC denotes and
T2330 70-74 VBD denotes were
T2331 75-85 RB denotes invariably
T2332 86-93 JJ denotes sterile
T2333 93-94 . denotes .
T2334 94-204 sentence denotes Ovaries of adult Trip13Gt/Gt females were severely dysmorphic and had few or no follicles (Figure 3A and 3B).
T2335 95-102 NNS denotes Ovaries
T2336 132-136 VBD denotes were
T2337 103-105 IN denotes of
T2338 106-111 JJ denotes adult
T2339 124-131 NNS denotes females
T2340 112-120 NN denotes Trip13Gt
T2341 121-123 NN denotes Gt
T2342 120-121 HYPH denotes /
T2343 137-145 RB denotes severely
T2344 146-156 JJ denotes dysmorphic
T2345 157-160 CC denotes and
T2346 161-164 VBD denotes had
T2347 165-168 JJ denotes few
T2348 175-184 NNS denotes follicles
T2349 169-171 CC denotes or
T2350 172-174 DT denotes no
T2351 185-186 -LRB- denotes (
T2352 193-195 NN denotes 3A
T2353 186-192 NN denotes Figure
T2354 196-199 CC denotes and
T2355 200-202 NN denotes 3B
T2356 202-203 -RRB- denotes )
T2357 203-204 . denotes .
T2358 204-456 sentence denotes The majority of oocyte loss occurred in late embryogenesis or early in postnatal development, since 2 d postpartum ovaries were markedly smaller than those of control littermates, and were lacking oocytes or newly forming follicles (Figure 3C and 3D).
T2359 205-208 DT denotes The
T2360 209-217 NN denotes majority
T2361 233-241 VBD denotes occurred
T2362 218-220 IN denotes of
T2363 221-227 NN denotes oocyte
T2364 228-232 NN denotes loss
T2365 242-244 IN denotes in
T2366 245-249 JJ denotes late
T2367 250-263 NN denotes embryogenesis
T2368 264-266 CC denotes or
T2369 267-272 RB denotes early
T2370 273-275 IN denotes in
T2371 276-285 JJ denotes postnatal
T2372 286-297 NN denotes development
T2373 297-299 , denotes ,
T2374 299-304 IN denotes since
T2375 328-332 VBD denotes were
T2376 305-306 CD denotes 2
T2377 307-308 NN denotes d
T2378 320-327 NNS denotes ovaries
T2379 309-319 RB denotes postpartum
T2380 333-341 RB denotes markedly
T2381 342-349 JJR denotes smaller
T2382 350-354 IN denotes than
T2383 355-360 DT denotes those
T2384 361-363 IN denotes of
T2385 364-371 NN denotes control
T2386 372-383 NNS denotes littermates
T2387 383-385 , denotes ,
T2388 385-388 CC denotes and
T2389 389-393 VBD denotes were
T2390 394-401 VBG denotes lacking
T2391 402-409 NNS denotes oocytes
T2392 410-412 CC denotes or
T2393 413-418 RB denotes newly
T2394 419-426 VBG denotes forming
T2395 427-436 NNS denotes follicles
T2396 437-438 -LRB- denotes (
T2397 445-447 NN denotes 3C
T2398 438-444 NN denotes Figure
T2399 448-451 CC denotes and
T2400 452-454 NN denotes 3D
T2401 454-455 -RRB- denotes )
T2402 455-456 . denotes .
T2403 456-522 sentence denotes Thus, oocytes failed to progress to the dictyate (resting) phase.
T2404 457-461 RB denotes Thus
T2405 471-477 VBD denotes failed
T2406 461-463 , denotes ,
T2407 463-470 NNS denotes oocytes
T2408 478-480 TO denotes to
T2409 481-489 VB denotes progress
T2410 490-492 IN denotes to
T2411 493-496 DT denotes the
T2412 516-521 NN denotes phase
T2413 497-505 NN denotes dictyate
T2414 506-507 -LRB- denotes (
T2415 507-514 VBG denotes resting
T2416 514-515 -RRB- denotes )
T2417 521-522 . denotes .
T2418 522-727 sentence denotes Since we observed oocytes with pachytene stage chromosomes in 17.5 d Trip13Gt/Gt embryonic ovaries (unpublished data), this indicates that oocytes were eliminated somewhere between pachynema and dictyate.
T2419 523-528 IN denotes Since
T2420 532-540 VBD denotes observed
T2421 529-531 PRP denotes we
T2422 647-656 VBZ denotes indicates
T2423 541-548 NNS denotes oocytes
T2424 549-553 IN denotes with
T2425 554-563 NN denotes pachytene
T2426 564-569 NN denotes stage
T2427 570-581 NNS denotes chromosomes
T2428 582-584 IN denotes in
T2429 585-589 CD denotes 17.5
T2430 590-591 NN denotes d
T2431 614-621 NNS denotes ovaries
T2432 592-600 NN denotes Trip13Gt
T2433 601-603 NN denotes Gt
T2434 600-601 HYPH denotes /
T2435 604-613 JJ denotes embryonic
T2436 622-623 -LRB- denotes (
T2437 635-639 NNS denotes data
T2438 623-634 JJ denotes unpublished
T2439 639-640 -RRB- denotes )
T2440 640-642 , denotes ,
T2441 642-646 DT denotes this
T2442 657-661 IN denotes that
T2443 675-685 VBN denotes eliminated
T2444 662-669 NNS denotes oocytes
T2445 670-674 VBD denotes were
T2446 686-695 RB denotes somewhere
T2447 696-703 IN denotes between
T2448 704-713 NN denotes pachynema
T2449 714-717 CC denotes and
T2450 718-726 NN denotes dictyate
T2451 726-727 . denotes .
R1483 T2315 T2316 nsubj Homozygotes,had
R1484 T2317 T2315 prep of,Homozygotes
R1485 T2318 T2319 det both,sexes
R1486 T2319 T2317 pobj sexes,of
R1487 T2320 T2321 amod small,gonads
R1488 T2321 T2316 dobj gonads,had
R1489 T2322 T2323 punct (,2C
R1490 T2323 T2316 parataxis 2C,had
R1491 T2324 T2323 compound Figure,2C
R1492 T2325 T2323 punct ;,2C
R1493 T2326 T2323 advcl see,2C
R1494 T2327 T2326 advmod below,see
R1495 T2328 T2323 punct ),2C
R1496 T2329 T2316 cc and,had
R1497 T2330 T2316 conj were,had
R1498 T2331 T2332 advmod invariably,sterile
R1499 T2332 T2330 acomp sterile,were
R1500 T2333 T2316 punct .,had
R1501 T2335 T2336 nsubj Ovaries,were
R1502 T2337 T2335 prep of,Ovaries
R1503 T2338 T2339 amod adult,females
R1504 T2339 T2337 pobj females,of
R1505 T2340 T2341 compound Trip13Gt,Gt
R1506 T2341 T2339 compound Gt,females
R1507 T2342 T2341 punct /,Gt
R1508 T2343 T2344 advmod severely,dysmorphic
R1509 T2344 T2336 acomp dysmorphic,were
R1510 T2345 T2336 cc and,were
R1511 T2346 T2336 conj had,were
R1512 T2347 T2348 amod few,follicles
R1513 T2348 T2346 dobj follicles,had
R1514 T2349 T2348 cc or,follicles
R1515 T2350 T2348 det no,follicles
R1516 T2351 T2352 punct (,3A
R1517 T2352 T2346 parataxis 3A,had
R1518 T2353 T2352 compound Figure,3A
R1519 T2354 T2352 cc and,3A
R1520 T2355 T2352 conj 3B,3A
R1521 T2356 T2352 punct ),3A
R1522 T2357 T2336 punct .,were
R1523 T2359 T2360 det The,majority
R1524 T2360 T2361 nsubj majority,occurred
R1525 T2362 T2360 prep of,majority
R1526 T2363 T2364 compound oocyte,loss
R1527 T2364 T2362 pobj loss,of
R1528 T2365 T2361 prep in,occurred
R1529 T2366 T2367 amod late,embryogenesis
R1530 T2367 T2365 pobj embryogenesis,in
R1531 T2368 T2365 cc or,in
R1532 T2369 T2370 advmod early,in
R1533 T2370 T2365 conj in,in
R1534 T2371 T2372 amod postnatal,development
R1535 T2372 T2370 pobj development,in
R1536 T2373 T2361 punct ", ",occurred
R1537 T2374 T2375 mark since,were
R1538 T2375 T2361 advcl were,occurred
R1539 T2376 T2377 nummod 2,d
R1540 T2377 T2378 nmod d,ovaries
R1541 T2378 T2375 nsubj ovaries,were
R1542 T2379 T2378 advmod postpartum,ovaries
R1543 T2380 T2381 advmod markedly,smaller
R1544 T2381 T2375 acomp smaller,were
R1545 T2382 T2381 prep than,smaller
R1546 T2383 T2382 pobj those,than
R1547 T2384 T2383 prep of,those
R1548 T2385 T2386 compound control,littermates
R1549 T2386 T2384 pobj littermates,of
R1550 T2387 T2375 punct ", ",were
R1551 T2388 T2375 cc and,were
R1552 T2389 T2390 aux were,lacking
R1553 T2390 T2375 conj lacking,were
R1554 T2391 T2390 dobj oocytes,lacking
R1555 T2392 T2391 cc or,oocytes
R1556 T2393 T2394 advmod newly,forming
R1557 T2394 T2395 amod forming,follicles
R1585 T2426 T2427 compound stage,chromosomes
R1586 T2427 T2424 pobj chromosomes,with
R1587 T2428 T2427 prep in,chromosomes
R1588 T2429 T2430 nummod 17.5,d
R1589 T2430 T2431 nmod d,ovaries
R1590 T2431 T2428 pobj ovaries,in
R1591 T2432 T2433 nmod Trip13Gt,Gt
R1592 T2433 T2431 nmod Gt,ovaries
R1593 T2434 T2433 punct /,Gt
R1594 T2435 T2431 amod embryonic,ovaries
R1595 T2436 T2437 punct (,data
R1596 T2437 T2420 meta data,observed
R1597 T2438 T2437 amod unpublished,data
R1598 T2439 T2437 punct ),data
R1599 T2440 T2422 punct ", ",indicates
R1600 T2441 T2422 nsubj this,indicates
R1601 T2442 T2443 mark that,eliminated
R1602 T2443 T2422 ccomp eliminated,indicates
R1603 T2444 T2443 nsubjpass oocytes,eliminated
R1604 T2445 T2443 auxpass were,eliminated
R1605 T2446 T2443 advmod somewhere,eliminated
R1606 T2447 T2446 prep between,somewhere
R1607 T2448 T2447 pobj pachynema,between
R1608 T2449 T2448 cc and,pachynema
R1609 T2450 T2448 conj dictyate,pachynema
R1610 T2451 T2422 punct .,indicates
R1558 T2395 T2391 conj follicles,oocytes
R1559 T2396 T2397 punct (,3C
R1560 T2397 T2361 parataxis 3C,occurred
R1561 T2398 T2397 compound Figure,3C
R1562 T2399 T2397 cc and,3C
R1563 T2400 T2397 conj 3D,3C
R1564 T2401 T2397 punct ),3C
R1565 T2402 T2361 punct .,occurred
R1566 T2404 T2405 advmod Thus,failed
R1567 T2406 T2405 punct ", ",failed
R1568 T2407 T2405 nsubj oocytes,failed
R1569 T2408 T2409 aux to,progress
R1570 T2409 T2405 xcomp progress,failed
R1571 T2410 T2409 prep to,progress
R1572 T2411 T2412 det the,phase
R1573 T2412 T2410 pobj phase,to
R1574 T2413 T2412 nmod dictyate,phase
R1575 T2414 T2415 punct (,resting
R1576 T2415 T2413 parataxis resting,dictyate
R1577 T2416 T2415 punct ),resting
R1578 T2417 T2405 punct .,failed
R1579 T2419 T2420 mark Since,observed
R1580 T2420 T2422 advcl observed,indicates
R1581 T2421 T2420 nsubj we,observed
R1582 T2423 T2420 dobj oocytes,observed
R1583 T2424 T2423 prep with,oocytes
R1584 T2425 T2426 compound pachytene,stage

craft-ca-core-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T2209 36-42 UBERON:0000991 denotes gonads
T2210 95-102 UBERON:0000992 denotes Ovaries
T2211 106-111 UBERON:0007023 denotes adult
T2212 112-118 PR:000016672 denotes Trip13
T2213 221-227 CL:0000023 denotes oocyte
T2214 250-263 GO:0009790 denotes embryogenesis
T2215 280-285 GO:0007567 denotes natal
T2216 313-319 GO:0007567 denotes partum
T2217 320-327 UBERON:0000992 denotes ovaries
T2218 402-409 CL:0000023 denotes oocytes
T2219 463-470 CL:0000023 denotes oocytes
T2220 541-548 CL:0000023 denotes oocytes
T2221 554-563 GO:0000239 denotes pachytene
T2222 592-598 PR:000016672 denotes Trip13
T2223 604-613 UBERON:0000922 denotes embryonic
T2224 614-621 UBERON:0000992 denotes ovaries
T2225 662-669 CL:0000023 denotes oocytes
T2226 704-713 GO:0000239 denotes pachynema

craft-ca-core-ex-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T2263 402-409 CL:0000023 denotes oocytes
T2264 427-436 UBERON_EXT:follicle denotes follicles
T2252 36-42 UBERON:0000991 denotes gonads
T2253 95-102 UBERON:0000992 denotes Ovaries
T2254 106-111 UBERON:0007023 denotes adult
T2255 112-118 PR_EXT:000016672 denotes Trip13
T2256 124-131 PATO_UBERON_EXT:female_or_bearer_of_femaleness denotes females
T2257 175-184 UBERON_EXT:follicle denotes follicles
T2258 221-227 CL:0000023 denotes oocyte
T2259 250-263 GO:0009790 denotes embryogenesis
T2260 280-285 GO:0007567 denotes natal
T2261 313-319 GO:0007567 denotes partum
T2262 320-327 UBERON:0000992 denotes ovaries
T2265 463-470 CL:0000023 denotes oocytes
T2266 541-548 CL:0000023 denotes oocytes
T2267 554-563 GO:0000239 denotes pachytene
T2268 570-581 GO_SO_EXT:chromosome denotes chromosomes
T2269 592-598 PR_EXT:000016672 denotes Trip13
T2270 604-613 UBERON:0000922 denotes embryonic
T2271 614-621 UBERON:0000992 denotes ovaries
T2272 662-669 CL:0000023 denotes oocytes
T2273 675-685 GO_EXT:killing denotes eliminated
T2274 704-713 GO:0000239 denotes pachynema