PMC:1920263 / 79-282
Annnotations
test2
Id | Subject | Object | Predicate | Lexical cue | Negation |
---|---|---|---|---|---|
T27 | 0-8 | Protein | denotes | APOBEC3G | true |
T28 | 10-13 | Protein | denotes | A3G | |
T29 | 92-101 | Gene_expression | denotes | expressed | |
R20 | T27 | T29 | themeOf | APOBEC3G,expressed | |
R21 | T28 | T27 | equivalentTo | A3G,APOBEC3G |
UBERON-AE
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T42 | 116-121 | http://purl.obolibrary.org/obo/UBERON_0000178 | denotes | blood |
bionlp-st-ge-2016-spacy-parsed
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T329 | 0-8 | NNP | denotes | APOBEC3G |
T330 | 9-10 | -LRB- | denotes | ( |
T331 | 10-13 | NNP | denotes | A3G |
T332 | 13-14 | -RRB- | denotes | ) |
T333 | 14-15 | , | denotes | , |
T334 | 16-17 | DT | denotes | a |
T335 | 18-24 | NN | denotes | member |
T336 | 25-27 | IN | denotes | of |
T337 | 28-31 | DT | denotes | the |
T338 | 32-40 | RB | denotes | recently |
T339 | 41-51 | VBN | denotes | discovered |
T340 | 52-58 | NN | denotes | family |
T341 | 59-61 | IN | denotes | of |
T342 | 62-67 | JJ | denotes | human |
T343 | 68-76 | NN | denotes | cytidine |
T344 | 77-87 | NNS | denotes | deaminases |
T345 | 87-88 | , | denotes | , |
T346 | 89-91 | VBZ | denotes | is |
T347 | 92-101 | VBN | denotes | expressed |
T348 | 102-104 | IN | denotes | in |
T349 | 105-115 | JJ | denotes | peripheral |
T350 | 116-121 | NN | denotes | blood |
T351 | 122-133 | NNS | denotes | lymphocytes |
T352 | 134-137 | CC | denotes | and |
T353 | 138-141 | VBZ | denotes | has |
T354 | 142-146 | VBN | denotes | been |
T355 | 147-152 | VBN | denotes | shown |
T356 | 153-155 | TO | denotes | to |
T357 | 156-158 | VB | denotes | be |
T358 | 159-165 | JJ | denotes | active |
T359 | 166-173 | IN | denotes | against |
T360 | 174-179 | NNP | denotes | HIV-1 |
T361 | 180-183 | CC | denotes | and |
T362 | 184-189 | JJ | denotes | other |
T363 | 190-202 | NNS | denotes | retroviruses |
T364 | 202-203 | . | denotes | . |
R278 | T330 | T331 | punct | (,A3G |
R279 | T331 | T329 | appos | A3G,APOBEC3G |
R280 | T332 | T329 | punct | ),APOBEC3G |
R282 | T334 | T335 | det | a,member |
R284 | T336 | T335 | prep | of,member |
R285 | T337 | T340 | det | the,family |
R286 | T338 | T339 | advmod | recently,discovered |
R287 | T339 | T340 | amod | discovered,family |
R288 | T340 | T336 | pobj | family,of |
R289 | T341 | T340 | prep | of,family |
R290 | T342 | T344 | amod | human,deaminases |
R291 | T343 | T344 | compound | cytidine,deaminases |
R292 | T344 | T341 | pobj | deaminases,of |
R293 | T345 | T347 | punct | ",",expressed |
R294 | T346 | T347 | auxpass | is,expressed |
R295 | T347 | T347 | ROOT | expressed,expressed |
R296 | T348 | T347 | prep | in,expressed |
R297 | T349 | T351 | amod | peripheral,lymphocytes |
R298 | T350 | T351 | compound | blood,lymphocytes |
R299 | T351 | T348 | pobj | lymphocytes,in |
R300 | T352 | T347 | cc | and,expressed |
R301 | T353 | T355 | aux | has,shown |
R302 | T354 | T355 | auxpass | been,shown |
R303 | T355 | T347 | conj | shown,expressed |
R304 | T356 | T357 | aux | to,be |
R305 | T357 | T355 | xcomp | be,shown |
R306 | T358 | T357 | acomp | active,be |
R307 | T359 | T358 | prep | against,active |
R308 | T360 | T359 | pobj | HIV-1,against |
R309 | T361 | T360 | cc | and,HIV-1 |
R310 | T362 | T363 | amod | other,retroviruses |
R311 | T363 | T360 | conj | retroviruses,HIV-1 |
R312 | T364 | T347 | punct | .,expressed |
sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T65 | 0-203 | Sentence | denotes | APOBEC3G (A3G), a member of the recently discovered family of human cytidine deaminases, is expressed in peripheral blood lymphocytes and has been shown to be active against HIV-1 and other retroviruses. |
T3 | 0-203 | Sentence | denotes | APOBEC3G (A3G), a member of the recently discovered family of human cytidine deaminases, is expressed in peripheral blood lymphocytes and has been shown to be active against HIV-1 and other retroviruses. |
pmc-enju-pas
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T87 | 0-8 | NN | denotes | APOBEC3G |
T88 | 9-10 | -LRB- | denotes | ( |
T89 | 10-13 | NN | denotes | A3G |
T90 | 13-14 | -RRB- | denotes | ) |
T91 | 14-15 | -COMMA- | denotes | , |
T92 | 16-17 | DT | denotes | a |
T93 | 18-24 | NN | denotes | member |
T94 | 25-27 | IN | denotes | of |
T95 | 28-31 | DT | denotes | the |
T96 | 32-40 | RB | denotes | recently |
T97 | 41-51 | VB | denotes | discovered |
T98 | 52-58 | NN | denotes | family |
T99 | 59-61 | IN | denotes | of |
T100 | 62-67 | JJ | denotes | human |
T101 | 68-76 | NN | denotes | cytidine |
T102 | 77-87 | NN | denotes | deaminases |
T103 | 87-88 | -COMMA- | denotes | , |
T104 | 89-91 | VB | denotes | is |
T105 | 92-101 | VB | denotes | expressed |
T106 | 102-104 | IN | denotes | in |
T107 | 105-115 | JJ | denotes | peripheral |
T108 | 116-121 | NN | denotes | blood |
T109 | 122-133 | NN | denotes | lymphocytes |
T110 | 134-137 | CC | denotes | and |
T111 | 138-141 | VB | denotes | has |
T112 | 142-146 | VB | denotes | been |
T113 | 147-152 | VB | denotes | shown |
T114 | 153-155 | TO | denotes | to |
T115 | 156-158 | VB | denotes | be |
T116 | 159-165 | JJ | denotes | active |
T117 | 166-173 | IN | denotes | against |
T118 | 174-179 | NN | denotes | HIV-1 |
T119 | 180-183 | CC | denotes | and |
T120 | 184-189 | JJ | denotes | other |
T121 | 190-202 | NN | denotes | retroviruses |
R52 | T87 | T88 | arg1Of | APOBEC3G,( |
R53 | T87 | T91 | arg1Of | APOBEC3G,"," |
R54 | T87 | T104 | arg1Of | APOBEC3G,is |
R55 | T87 | T105 | arg2Of | APOBEC3G,expressed |
R56 | T87 | T111 | arg1Of | APOBEC3G,has |
R57 | T87 | T112 | arg1Of | APOBEC3G,been |
R58 | T87 | T113 | arg2Of | APOBEC3G,shown |
R59 | T87 | T115 | arg1Of | APOBEC3G,be |
R60 | T87 | T116 | arg1Of | APOBEC3G,active |
R61 | T89 | T88 | arg2Of | A3G,( |
R62 | T90 | T88 | arg3Of | ),( |
R63 | T93 | T91 | arg2Of | member,"," |
R64 | T93 | T92 | arg1Of | member,a |
R65 | T93 | T94 | arg1Of | member,of |
R66 | T97 | T96 | arg1Of | discovered,recently |
R67 | T98 | T94 | arg2Of | family,of |
R68 | T98 | T95 | arg1Of | family,the |
R69 | T98 | T97 | arg1Of | family,discovered |
R70 | T98 | T99 | arg1Of | family,of |
R71 | T102 | T99 | arg2Of | deaminases,of |
R72 | T102 | T100 | arg1Of | deaminases,human |
R73 | T102 | T101 | arg1Of | deaminases,cytidine |
R74 | T105 | T104 | arg2Of | expressed,is |
R75 | T105 | T106 | arg1Of | expressed,in |
R76 | T105 | T110 | arg1Of | expressed,and |
R77 | T109 | T106 | arg2Of | lymphocytes,in |
R78 | T109 | T107 | arg1Of | lymphocytes,peripheral |
R79 | T109 | T108 | arg1Of | lymphocytes,blood |
R80 | T110 | T103 | arg1Of | and,"," |
R81 | T113 | T110 | arg2Of | shown,and |
R82 | T113 | T111 | arg2Of | shown,has |
R83 | T113 | T112 | arg2Of | shown,been |
R84 | T115 | T113 | arg3Of | be,shown |
R85 | T115 | T114 | arg1Of | be,to |
R86 | T116 | T115 | arg2Of | active,be |
R87 | T116 | T117 | arg1Of | active,against |
R88 | T118 | T119 | arg1Of | HIV-1,and |
R89 | T119 | T117 | arg2Of | and,against |
R90 | T121 | T119 | arg2Of | retroviruses,and |
R91 | T121 | T120 | arg1Of | retroviruses,other |
bionlp-st-ge-2016-coref
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T294 | 0-8 | Antecedent | denotes | APOBEC3G |
events-check-again
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T663 | 0-8 | Protein | denotes | APOBEC3G |
T664 | 10-13 | Protein | denotes | A3G |
T665 | 92-101 | Gene_expression | denotes | expressed |
R551 | T663 | T665 | themeOf | APOBEC3G,expressed |
R552 | T664 | T663 | equivalentTo | A3G,APOBEC3G |
bionlp-st-ge-2016-reference-tees
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T684 | 0-8 | Protein | denotes | APOBEC3G |
T685 | 10-13 | Protein | denotes | A3G |
T686 | 52-87 | Protein | denotes | family of human cytidine deaminases |
T687 | 92-101 | Gene_expression | denotes | expressed |
T688 | 92-101 | Gene_expression | denotes | expressed |
R565 | T684 | T687 | themeOf | APOBEC3G,expressed |
R566 | T685 | T688 | themeOf | A3G,expressed |
bionlp-st-ge-2016-reference
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T49 | 0-8 | Protein | denotes | APOBEC3G |
T50 | 10-13 | Protein | denotes | A3G |
T51 | 92-101 | Gene_expression | denotes | expressed |
R33 | T49 | T51 | themeOf | APOBEC3G,expressed |
R34 | T50 | T49 | equivalentTo | A3G,APOBEC3G |
bionlp-st-ge-2016-uniprot
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T298 | 0-8 | Q9HC16 | denotes | APOBEC3G |
T299 | 10-13 | Q9HC16 | denotes | A3G |