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PMC:1920263 / 79-282 JSONTXT

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test2

Id Subject Object Predicate Lexical cue Negation
T27 0-8 Protein denotes APOBEC3G true
T28 10-13 Protein denotes A3G
T29 92-101 Gene_expression denotes expressed
R20 T27 T29 themeOf APOBEC3G,expressed
R21 T28 T27 equivalentTo A3G,APOBEC3G

UBERON-AE

Id Subject Object Predicate Lexical cue
T42 116-121 http://purl.obolibrary.org/obo/UBERON_0000178 denotes blood

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T329 0-8 NNP denotes APOBEC3G
T330 9-10 -LRB- denotes (
T331 10-13 NNP denotes A3G
T332 13-14 -RRB- denotes )
T333 14-15 , denotes ,
T334 16-17 DT denotes a
T335 18-24 NN denotes member
T336 25-27 IN denotes of
T337 28-31 DT denotes the
T338 32-40 RB denotes recently
T339 41-51 VBN denotes discovered
T340 52-58 NN denotes family
T341 59-61 IN denotes of
T342 62-67 JJ denotes human
T343 68-76 NN denotes cytidine
T344 77-87 NNS denotes deaminases
T345 87-88 , denotes ,
T346 89-91 VBZ denotes is
T347 92-101 VBN denotes expressed
T348 102-104 IN denotes in
T349 105-115 JJ denotes peripheral
T350 116-121 NN denotes blood
T351 122-133 NNS denotes lymphocytes
T352 134-137 CC denotes and
T353 138-141 VBZ denotes has
T354 142-146 VBN denotes been
T355 147-152 VBN denotes shown
T356 153-155 TO denotes to
T357 156-158 VB denotes be
T358 159-165 JJ denotes active
T359 166-173 IN denotes against
T360 174-179 NNP denotes HIV-1
T361 180-183 CC denotes and
T362 184-189 JJ denotes other
T363 190-202 NNS denotes retroviruses
T364 202-203 . denotes .
R278 T330 T331 punct (,A3G
R279 T331 T329 appos A3G,APOBEC3G
R280 T332 T329 punct ),APOBEC3G
R282 T334 T335 det a,member
R284 T336 T335 prep of,member
R285 T337 T340 det the,family
R286 T338 T339 advmod recently,discovered
R287 T339 T340 amod discovered,family
R288 T340 T336 pobj family,of
R289 T341 T340 prep of,family
R290 T342 T344 amod human,deaminases
R291 T343 T344 compound cytidine,deaminases
R292 T344 T341 pobj deaminases,of
R293 T345 T347 punct ",",expressed
R294 T346 T347 auxpass is,expressed
R295 T347 T347 ROOT expressed,expressed
R296 T348 T347 prep in,expressed
R297 T349 T351 amod peripheral,lymphocytes
R298 T350 T351 compound blood,lymphocytes
R299 T351 T348 pobj lymphocytes,in
R300 T352 T347 cc and,expressed
R301 T353 T355 aux has,shown
R302 T354 T355 auxpass been,shown
R303 T355 T347 conj shown,expressed
R304 T356 T357 aux to,be
R305 T357 T355 xcomp be,shown
R306 T358 T357 acomp active,be
R307 T359 T358 prep against,active
R308 T360 T359 pobj HIV-1,against
R309 T361 T360 cc and,HIV-1
R310 T362 T363 amod other,retroviruses
R311 T363 T360 conj retroviruses,HIV-1
R312 T364 T347 punct .,expressed

sentences

Id Subject Object Predicate Lexical cue
T65 0-203 Sentence denotes APOBEC3G (A3G), a member of the recently discovered family of human cytidine deaminases, is expressed in peripheral blood lymphocytes and has been shown to be active against HIV-1 and other retroviruses.
T3 0-203 Sentence denotes APOBEC3G (A3G), a member of the recently discovered family of human cytidine deaminases, is expressed in peripheral blood lymphocytes and has been shown to be active against HIV-1 and other retroviruses.

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T87 0-8 NN denotes APOBEC3G
T88 9-10 -LRB- denotes (
T89 10-13 NN denotes A3G
T90 13-14 -RRB- denotes )
T91 14-15 -COMMA- denotes ,
T92 16-17 DT denotes a
T93 18-24 NN denotes member
T94 25-27 IN denotes of
T95 28-31 DT denotes the
T96 32-40 RB denotes recently
T97 41-51 VB denotes discovered
T98 52-58 NN denotes family
T99 59-61 IN denotes of
T100 62-67 JJ denotes human
T101 68-76 NN denotes cytidine
T102 77-87 NN denotes deaminases
T103 87-88 -COMMA- denotes ,
T104 89-91 VB denotes is
T105 92-101 VB denotes expressed
T106 102-104 IN denotes in
T107 105-115 JJ denotes peripheral
T108 116-121 NN denotes blood
T109 122-133 NN denotes lymphocytes
T110 134-137 CC denotes and
T111 138-141 VB denotes has
T112 142-146 VB denotes been
T113 147-152 VB denotes shown
T114 153-155 TO denotes to
T115 156-158 VB denotes be
T116 159-165 JJ denotes active
T117 166-173 IN denotes against
T118 174-179 NN denotes HIV-1
T119 180-183 CC denotes and
T120 184-189 JJ denotes other
T121 190-202 NN denotes retroviruses
R52 T87 T88 arg1Of APOBEC3G,(
R53 T87 T91 arg1Of APOBEC3G,","
R54 T87 T104 arg1Of APOBEC3G,is
R55 T87 T105 arg2Of APOBEC3G,expressed
R56 T87 T111 arg1Of APOBEC3G,has
R57 T87 T112 arg1Of APOBEC3G,been
R58 T87 T113 arg2Of APOBEC3G,shown
R59 T87 T115 arg1Of APOBEC3G,be
R60 T87 T116 arg1Of APOBEC3G,active
R61 T89 T88 arg2Of A3G,(
R62 T90 T88 arg3Of ),(
R63 T93 T91 arg2Of member,","
R64 T93 T92 arg1Of member,a
R65 T93 T94 arg1Of member,of
R66 T97 T96 arg1Of discovered,recently
R67 T98 T94 arg2Of family,of
R68 T98 T95 arg1Of family,the
R69 T98 T97 arg1Of family,discovered
R70 T98 T99 arg1Of family,of
R71 T102 T99 arg2Of deaminases,of
R72 T102 T100 arg1Of deaminases,human
R73 T102 T101 arg1Of deaminases,cytidine
R74 T105 T104 arg2Of expressed,is
R75 T105 T106 arg1Of expressed,in
R76 T105 T110 arg1Of expressed,and
R77 T109 T106 arg2Of lymphocytes,in
R78 T109 T107 arg1Of lymphocytes,peripheral
R79 T109 T108 arg1Of lymphocytes,blood
R80 T110 T103 arg1Of and,","
R81 T113 T110 arg2Of shown,and
R82 T113 T111 arg2Of shown,has
R83 T113 T112 arg2Of shown,been
R84 T115 T113 arg3Of be,shown
R85 T115 T114 arg1Of be,to
R86 T116 T115 arg2Of active,be
R87 T116 T117 arg1Of active,against
R88 T118 T119 arg1Of HIV-1,and
R89 T119 T117 arg2Of and,against
R90 T121 T119 arg2Of retroviruses,and
R91 T121 T120 arg1Of retroviruses,other

bionlp-st-ge-2016-coref

Id Subject Object Predicate Lexical cue
T294 0-8 Antecedent denotes APOBEC3G

events-check-again

Id Subject Object Predicate Lexical cue
T663 0-8 Protein denotes APOBEC3G
T664 10-13 Protein denotes A3G
T665 92-101 Gene_expression denotes expressed
R551 T663 T665 themeOf APOBEC3G,expressed
R552 T664 T663 equivalentTo A3G,APOBEC3G

bionlp-st-ge-2016-reference-tees

Id Subject Object Predicate Lexical cue
T684 0-8 Protein denotes APOBEC3G
T685 10-13 Protein denotes A3G
T686 52-87 Protein denotes family of human cytidine deaminases
T687 92-101 Gene_expression denotes expressed
T688 92-101 Gene_expression denotes expressed
R565 T684 T687 themeOf APOBEC3G,expressed
R566 T685 T688 themeOf A3G,expressed

bionlp-st-ge-2016-reference

Id Subject Object Predicate Lexical cue
T49 0-8 Protein denotes APOBEC3G
T50 10-13 Protein denotes A3G
T51 92-101 Gene_expression denotes expressed
R33 T49 T51 themeOf APOBEC3G,expressed
R34 T50 T49 equivalentTo A3G,APOBEC3G

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T298 0-8 Q9HC16 denotes APOBEC3G
T299 10-13 Q9HC16 denotes A3G