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PMC:1920263 / 7467-7699 JSONTXT

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bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T3159 0-4 DT denotes This
T3160 5-8 NNP denotes PCR
T3161 9-12 VBD denotes was
T3162 13-22 VBN denotes performed
T3163 23-27 IN denotes with
T3164 28-30 DT denotes an
T3165 31-40 NN denotes annealing
T3166 41-52 NN denotes temperature
T3167 53-55 IN denotes of
T3168 56-58 CD denotes 65
T3169 58-59 CD denotes °
T3170 59-61 NNP denotes C.
T3171 62-72 NNP denotes pGL3promE1
T3172 73-74 -LRB- denotes (
T3173 74-84 VBG denotes containing
T3174 85-96 NNS denotes nucleotides
T3175 97-98 VBP denotes −
T3176 98-101 CD denotes 114
T3177 101-102 CD denotes /
T3178 102-103 NN denotes −
T3179 103-105 CD denotes 85
T3180 105-106 -RRB- denotes )
T3181 107-110 CC denotes and
T3182 111-121 NNP denotes pGL3promE2
T3183 122-123 -LRB- denotes (
T3184 123-133 VBG denotes containing
T3185 134-145 NNS denotes nucleotides
T3186 146-147 VBP denotes −
T3187 147-149 CD denotes 92
T3188 149-150 CD denotes /
T3189 150-151 NN denotes −
T3190 151-153 CD denotes 63
T3191 153-154 -RRB- denotes )
T3192 155-159 VBD denotes were
T3193 160-171 VBN denotes constructed
T3194 172-174 IN denotes by
T3195 175-184 VBG denotes annealing
T3196 185-188 DT denotes the
T3197 189-198 VBG denotes following
T3198 199-214 JJ denotes single-stranded
T3199 215-231 NNS denotes oligonucleotides
T3200 231-232 : denotes :
R2575 T3159 T3160 det This,PCR
R2576 T3160 T3162 nsubjpass PCR,performed
R2577 T3161 T3162 auxpass was,performed
R2578 T3162 T3162 ROOT performed,performed
R2579 T3163 T3162 prep with,performed
R2580 T3164 T3166 det an,temperature
R2581 T3165 T3166 compound annealing,temperature
R2582 T3166 T3163 pobj temperature,with
R2583 T3167 T3166 prep of,temperature
R2584 T3168 T3171 nummod 65,pGL3promE1
R2585 T3169 T3171 nummod °,pGL3promE1
R2586 T3170 T3171 compound C.,pGL3promE1
R2587 T3171 T3167 pobj pGL3promE1,of
R2588 T3172 T3173 punct (,containing
R2589 T3173 T3171 acl containing,pGL3promE1
R2590 T3174 T3173 dobj nucleotides,containing
R2591 T3175 T3178 nmod −,−
R2592 T3176 T3177 compound 114,/
R2593 T3177 T3178 punct /,−
R2594 T3178 T3193 nsubjpass −,constructed
R2595 T3179 T3178 nummod 85,−
R2596 T3180 T3178 punct ),−
R2597 T3181 T3178 cc and,−
R2598 T3182 T3178 conj pGL3promE2,−
R2599 T3183 T3184 punct (,containing
R2600 T3184 T3193 nsubjpass containing,constructed
R2601 T3185 T3184 dobj nucleotides,containing
R2602 T3186 T3184 prep −,containing
R2603 T3187 T3189 nummod 92,−
R2604 T3188 T3189 punct /,−
R2605 T3189 T3186 appos −,−
R2606 T3190 T3189 nummod 63,−
R2607 T3191 T3189 punct ),−
R2608 T3192 T3193 auxpass were,constructed
R2609 T3193 T3162 conj constructed,performed
R2610 T3194 T3193 agent by,constructed
R2611 T3195 T3194 pcomp annealing,by
R2612 T3196 T3199 det the,oligonucleotides
R2613 T3197 T3199 amod following,oligonucleotides
R2614 T3198 T3199 amod single-stranded,oligonucleotides
R2615 T3199 T3195 dobj oligonucleotides,annealing
R2616 T3200 T3199 punct :,oligonucleotides

sentences

Id Subject Object Predicate Lexical cue
T2654 0-232 Sentence denotes This PCR was performed with an annealing temperature of 65°C. pGL3promE1 (containing nucleotides −114/−85) and pGL3promE2 (containing nucleotides −92/−63) were constructed by annealing the following single-stranded oligonucleotides:
T50 0-232 Sentence denotes This PCR was performed with an annealing temperature of 65°C. pGL3promE1 (containing nucleotides −114/−85) and pGL3promE2 (containing nucleotides −92/−63) were constructed by annealing the following single-stranded oligonucleotides: