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PMC:1920263 / 44-242 JSONTXT

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test2

Id Subject Object Predicate Lexical cue Negation
T26 10-18 Protein denotes APOBEC3G
T27 35-43 Protein denotes APOBEC3G true
T28 45-48 Protein denotes A3G
T29 127-136 Gene_expression denotes expressed
R20 T27 T29 themeOf APOBEC3G,expressed
R21 T28 T27 equivalentTo A3G,APOBEC3G

UBERON-AE

Id Subject Object Predicate Lexical cue
T42 151-156 http://purl.obolibrary.org/obo/UBERON_0000178 denotes blood

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T325 0-3 DT denotes the
T326 4-9 JJ denotes human
T327 10-18 NNP denotes APOBEC3G
T328 19-23 NN denotes gene
T329 35-43 NNP denotes APOBEC3G
T330 44-45 -LRB- denotes (
T331 45-48 NNP denotes A3G
T332 48-49 -RRB- denotes )
T333 49-50 , denotes ,
T334 51-52 DT denotes a
T335 53-59 NN denotes member
T336 60-62 IN denotes of
T337 63-66 DT denotes the
T338 67-75 RB denotes recently
T339 76-86 VBN denotes discovered
T340 87-93 NN denotes family
T341 94-96 IN denotes of
T342 97-102 JJ denotes human
T343 103-111 NN denotes cytidine
T344 112-122 NNS denotes deaminases
T345 122-123 , denotes ,
T346 124-126 VBZ denotes is
T347 127-136 VBN denotes expressed
T348 137-139 IN denotes in
T349 140-150 JJ denotes peripheral
T350 151-156 NN denotes blood
T351 157-168 NNS denotes lymphocytes
T352 169-172 CC denotes and
T353 173-176 VBZ denotes has
T354 177-181 VBN denotes been
T355 182-187 VBN denotes shown
T356 188-190 TO denotes to
T357 191-193 VB denotes be
R273 T325 T328 det the,gene
R274 T326 T328 amod human,gene
R275 T327 T328 compound APOBEC3G,gene
R277 T329 T328 appos APOBEC3G,gene
R278 T330 T331 punct (,A3G
R279 T331 T329 appos A3G,APOBEC3G
R280 T332 T329 punct ),APOBEC3G
R281 T333 T328 punct ",",gene
R282 T334 T335 det a,member
R283 T335 T328 appos member,gene
R284 T336 T335 prep of,member
R285 T337 T340 det the,family
R286 T338 T339 advmod recently,discovered
R287 T339 T340 amod discovered,family
R288 T340 T336 pobj family,of
R289 T341 T340 prep of,family
R290 T342 T344 amod human,deaminases
R291 T343 T344 compound cytidine,deaminases
R292 T344 T341 pobj deaminases,of
R293 T345 T347 punct ",",expressed
R294 T346 T347 auxpass is,expressed
R295 T347 T347 ROOT expressed,expressed
R296 T348 T347 prep in,expressed
R297 T349 T351 amod peripheral,lymphocytes
R298 T350 T351 compound blood,lymphocytes
R299 T351 T348 pobj lymphocytes,in
R300 T352 T347 cc and,expressed
R301 T353 T355 aux has,shown
R302 T354 T355 auxpass been,shown
R303 T355 T347 conj shown,expressed
R304 T356 T357 aux to,be
R305 T357 T355 xcomp be,shown

sentences

Id Subject Object Predicate Lexical cue
T2 26-34 Sentence denotes Abstract

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T83 0-3 DT denotes the
T84 4-9 JJ denotes human
T85 10-18 NN denotes APOBEC3G
T86 19-23 NN denotes gene
T87 35-43 NN denotes APOBEC3G
T88 44-45 -LRB- denotes (
T89 45-48 NN denotes A3G
T90 48-49 -RRB- denotes )
T91 49-50 -COMMA- denotes ,
T92 51-52 DT denotes a
T93 53-59 NN denotes member
T94 60-62 IN denotes of
T95 63-66 DT denotes the
T96 67-75 RB denotes recently
T97 76-86 VB denotes discovered
T98 87-93 NN denotes family
T99 94-96 IN denotes of
T100 97-102 JJ denotes human
T101 103-111 NN denotes cytidine
T102 112-122 NN denotes deaminases
T103 122-123 -COMMA- denotes ,
T104 124-126 VB denotes is
T105 127-136 VB denotes expressed
T106 137-139 IN denotes in
T107 140-150 JJ denotes peripheral
T108 151-156 NN denotes blood
T109 157-168 NN denotes lymphocytes
T110 169-172 CC denotes and
T111 173-176 VB denotes has
T112 177-181 VB denotes been
T113 182-187 VB denotes shown
T114 188-190 TO denotes to
T115 191-193 VB denotes be
R49 T86 T83 arg1Of gene,the
R50 T86 T84 arg1Of gene,human
R51 T86 T85 arg1Of gene,APOBEC3G
R52 T87 T88 arg1Of APOBEC3G,(
R53 T87 T91 arg1Of APOBEC3G,","
R54 T87 T104 arg1Of APOBEC3G,is
R55 T87 T105 arg2Of APOBEC3G,expressed
R56 T87 T111 arg1Of APOBEC3G,has
R57 T87 T112 arg1Of APOBEC3G,been
R58 T87 T113 arg2Of APOBEC3G,shown
R59 T87 T115 arg1Of APOBEC3G,be
R61 T89 T88 arg2Of A3G,(
R62 T90 T88 arg3Of ),(
R63 T93 T91 arg2Of member,","
R64 T93 T92 arg1Of member,a
R65 T93 T94 arg1Of member,of
R66 T97 T96 arg1Of discovered,recently
R67 T98 T94 arg2Of family,of
R68 T98 T95 arg1Of family,the
R69 T98 T97 arg1Of family,discovered
R70 T98 T99 arg1Of family,of
R71 T102 T99 arg2Of deaminases,of
R72 T102 T100 arg1Of deaminases,human
R73 T102 T101 arg1Of deaminases,cytidine
R74 T105 T104 arg2Of expressed,is
R75 T105 T106 arg1Of expressed,in
R76 T105 T110 arg1Of expressed,and
R77 T109 T106 arg2Of lymphocytes,in
R78 T109 T107 arg1Of lymphocytes,peripheral
R79 T109 T108 arg1Of lymphocytes,blood
R80 T110 T103 arg1Of and,","
R81 T113 T110 arg2Of shown,and
R82 T113 T111 arg2Of shown,has
R83 T113 T112 arg2Of shown,been
R84 T115 T113 arg3Of be,shown
R85 T115 T114 arg1Of be,to

bionlp-st-ge-2016-coref

Id Subject Object Predicate Lexical cue
T294 35-43 Antecedent denotes APOBEC3G

events-check-again

Id Subject Object Predicate Lexical cue
T662 10-18 Protein denotes APOBEC3G
T663 35-43 Protein denotes APOBEC3G
T664 45-48 Protein denotes A3G
T665 127-136 Gene_expression denotes expressed
R551 T663 T665 themeOf APOBEC3G,expressed
R552 T664 T663 equivalentTo A3G,APOBEC3G

bionlp-st-ge-2016-reference-tees

Id Subject Object Predicate Lexical cue
T680 4-23 Protein denotes human APOBEC3G gene
T684 35-43 Protein denotes APOBEC3G
T685 45-48 Protein denotes A3G
T686 87-122 Protein denotes family of human cytidine deaminases
T687 127-136 Gene_expression denotes expressed
T688 127-136 Gene_expression denotes expressed
R565 T684 T687 themeOf APOBEC3G,expressed
R566 T685 T688 themeOf A3G,expressed

bionlp-st-ge-2016-reference

Id Subject Object Predicate Lexical cue
T48 10-18 Protein denotes APOBEC3G
T49 35-43 Protein denotes APOBEC3G
T50 45-48 Protein denotes A3G
T51 127-136 Gene_expression denotes expressed
R33 T49 T51 themeOf APOBEC3G,expressed
R34 T50 T49 equivalentTo A3G,APOBEC3G

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T297 10-18 Q9HC16 denotes APOBEC3G
T298 35-43 Q9HC16 denotes APOBEC3G
T299 45-48 Q9HC16 denotes A3G