PMC:1920263 / 3604-3760
Annnotations
test2
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T784 | 67-78 | Positive_regulation | denotes | upregulates |
| T785 | 79-82 | Protein | denotes | A3G |
| R627 | T785 | T784 | themeOf | A3G,upregulates |
GO-CC
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1987 | 61-66 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
bionlp-st-ge-2016-spacy-parsed
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1844 | 0-5 | EX | denotes | There |
| T1845 | 6-8 | VBZ | denotes | is |
| T1846 | 9-10 | DT | denotes | a |
| T1847 | 11-17 | NN | denotes | report |
| T1848 | 18-28 | VBG | denotes | describing |
| T1849 | 29-33 | IN | denotes | that |
| T1850 | 34-43 | JJ | denotes | mitogenic |
| T1851 | 44-55 | NN | denotes | stimulation |
| T1852 | 56-58 | IN | denotes | of |
| T1853 | 59-60 | NNP | denotes | T |
| T1854 | 61-66 | NNS | denotes | cells |
| T1855 | 67-78 | VBZ | denotes | upregulates |
| T1856 | 79-82 | NNP | denotes | A3G |
| T1857 | 83-87 | NNP | denotes | mRNA |
| T1858 | 88-94 | NNS | denotes | levels |
| T1859 | 94-95 | , | denotes | , |
| T1860 | 96-99 | CC | denotes | but |
| T1861 | 100-104 | DT | denotes | this |
| T1862 | 105-108 | VBD | denotes | was |
| T1863 | 109-112 | RB | denotes | not |
| T1864 | 113-121 | VBN | denotes | analyzed |
| T1865 | 122-124 | IN | denotes | on |
| T1866 | 125-128 | DT | denotes | the |
| T1867 | 129-144 | JJ | denotes | transcriptional |
| T1868 | 145-150 | NN | denotes | level |
| T1869 | 151-152 | -LRB- | denotes | ( |
| T1870 | 152-154 | CD | denotes | 33 |
| T1871 | 154-155 | -RRB- | denotes | ) |
| T1872 | 155-156 | . | denotes | . |
| R1516 | T1844 | T1845 | expl | There,is |
| R1519 | T1845 | T1845 | ROOT | is,is |
| R1523 | T1846 | T1847 | det | a,report |
| R1526 | T1847 | T1845 | attr | report,is |
| R1530 | T1848 | T1847 | acl | describing,report |
| R1535 | T1849 | T1851 | det | that,stimulation |
| R1538 | T1850 | T1851 | amod | mitogenic,stimulation |
| R1542 | T1851 | T1848 | dobj | stimulation,describing |
| R1546 | T1852 | T1851 | prep | of,stimulation |
| R1549 | T1853 | T1854 | compound | T,cells |
| R1553 | T1854 | T1852 | pobj | cells,of |
| R1561 | T1855 | T1845 | dep | upregulates,is |
| R1565 | T1856 | T1857 | compound | A3G,mRNA |
| R1570 | T1857 | T1858 | compound | mRNA,levels |
| R1573 | T1858 | T1855 | dobj | levels,upregulates |
| R1577 | T1859 | T1845 | punct | ",",is |
| R1580 | T1860 | T1845 | cc | but,is |
| R1582 | T1861 | T1864 | nsubjpass | this,analyzed |
| R1585 | T1862 | T1864 | auxpass | was,analyzed |
| R1589 | T1863 | T1864 | neg | not,analyzed |
| R1592 | T1864 | T1845 | conj | analyzed,is |
| R1596 | T1865 | T1864 | prep | on,analyzed |
| R1598 | T1866 | T1868 | det | the,level |
| R1603 | T1867 | T1868 | amod | transcriptional,level |
| R1611 | T1868 | T1865 | pobj | level,on |
| R1615 | T1869 | T1868 | punct | (,level |
| R1619 | T1870 | T1868 | appos | 33,level |
| R1620 | T1871 | T1868 | punct | ),level |
| R1621 | T1872 | T1864 | punct | .,analyzed |
sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T861 | 0-156 | Sentence | denotes | There is a report describing that mitogenic stimulation of T cells upregulates A3G mRNA levels, but this was not analyzed on the transcriptional level (33). |
| T25 | 0-156 | Sentence | denotes | There is a report describing that mitogenic stimulation of T cells upregulates A3G mRNA levels, but this was not analyzed on the transcriptional level (33). |
2_test
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| 17517765-15297452-77155598 | 152-154 | 15297452 | denotes | 33 |
pmc-enju-pas
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1262 | 0-5 | EX | denotes | There |
| T1263 | 6-8 | VB | denotes | is |
| T1264 | 9-10 | DT | denotes | a |
| T1265 | 11-17 | NN | denotes | report |
| T1266 | 18-28 | VB | denotes | describing |
| T1267 | 29-33 | IN | denotes | that |
| T1268 | 34-43 | JJ | denotes | mitogenic |
| T1269 | 44-55 | NN | denotes | stimulation |
| T1270 | 56-58 | IN | denotes | of |
| T1271 | 59-60 | NN | denotes | T |
| T1272 | 61-66 | NN | denotes | cells |
| T1273 | 67-78 | VB | denotes | upregulates |
| T1274 | 79-82 | NN | denotes | A3G |
| T1275 | 83-87 | NN | denotes | mRNA |
| T1276 | 88-94 | NN | denotes | levels |
| T1277 | 94-95 | -COMMA- | denotes | , |
| T1278 | 96-99 | CC | denotes | but |
| T1279 | 100-104 | DT | denotes | this |
| T1280 | 105-108 | VB | denotes | was |
| T1281 | 109-112 | RB | denotes | not |
| T1282 | 113-121 | VB | denotes | analyzed |
| T1283 | 122-124 | IN | denotes | on |
| T1284 | 125-128 | DT | denotes | the |
| T1285 | 129-144 | JJ | denotes | transcriptional |
| T1286 | 145-150 | NN | denotes | level |
| T1287 | 151-152 | -LRB- | denotes | ( |
| T1288 | 152-154 | CD | denotes | 33 |
| T1289 | 154-155 | -RRB- | denotes | ) |
| R1054 | T1262 | T1263 | arg1Of | There,is |
| R1055 | T1263 | T1266 | modOf | is,describing |
| R1056 | T1263 | T1278 | arg1Of | is,but |
| R1057 | T1265 | T1264 | arg1Of | report,a |
| R1058 | T1265 | T1266 | arg1Of | report,describing |
| R1059 | T1269 | T1266 | arg2Of | stimulation,describing |
| R1060 | T1269 | T1267 | arg1Of | stimulation,that |
| R1061 | T1269 | T1268 | arg1Of | stimulation,mitogenic |
| R1062 | T1269 | T1270 | arg1Of | stimulation,of |
| R1063 | T1272 | T1270 | arg2Of | cells,of |
| R1064 | T1272 | T1271 | arg1Of | cells,T |
| R1065 | T1276 | T1263 | arg2Of | levels,is |
| R1066 | T1276 | T1273 | arg1Of | levels,upregulates |
| R1067 | T1276 | T1274 | arg1Of | levels,A3G |
| R1068 | T1276 | T1275 | arg1Of | levels,mRNA |
| R1069 | T1278 | T1277 | arg1Of | but,"," |
| R1070 | T1279 | T1280 | arg1Of | this,was |
| R1071 | T1279 | T1282 | arg2Of | this,analyzed |
| R1072 | T1282 | T1278 | arg2Of | analyzed,but |
| R1073 | T1282 | T1280 | arg2Of | analyzed,was |
| R1074 | T1282 | T1281 | arg1Of | analyzed,not |
| R1075 | T1282 | T1283 | arg1Of | analyzed,on |
| R1076 | T1286 | T1283 | arg2Of | level,on |
| R1077 | T1286 | T1284 | arg1Of | level,the |
| R1078 | T1286 | T1285 | arg1Of | level,transcriptional |
| R1079 | T1286 | T1287 | arg1Of | level,( |
| R1080 | T1288 | T1287 | arg2Of | 33,( |
| R1081 | T1289 | T1287 | arg3Of | ),( |
events-check-again
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T2266 | 67-78 | Positive_regulation | denotes | upregulates |
| T2267 | 79-82 | Protein | denotes | A3G |
| T2268 | 83-94 | Gene_expression | denotes | mRNA levels |
| R1848 | T2267 | T2268 | themeOf | A3G,mRNA levels |
| R1849 | T2268 | T2266 | themeOf | mRNA levels,upregulates |
bionlp-st-ge-2016-reference-tees
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T2298 | 79-87 | Protein | denotes | A3G mRNA |
| T2299 | 67-78 | Positive_regulation | denotes | upregulates |
| R1853 | T2298 | T2299 | themeOf | A3G mRNA,upregulates |
bionlp-st-ge-2016-reference
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T833 | 67-78 | Positive_regulation | denotes | upregulates |
| T834 | 79-82 | Protein | denotes | A3G |
| T835 | 83-94 | Gene_expression | denotes | mRNA levels |
| R649 | T834 | T835 | themeOf | A3G,mRNA levels |
| R650 | T835 | T833 | themeOf | mRNA levels,upregulates |
bionlp-st-ge-2016-uniprot
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1420 | 79-82 | Q9HC16 | denotes | A3G |