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PMC:1920263 / 2347-2752 JSONTXT

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test2

Id Subject Object Predicate Lexical cue
T767 89-92 Protein denotes A3G
T768 337-340 Protein denotes A3G

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T1614 6-8 VBZ denotes is
T1615 9-13 JJ denotes able
T1616 14-16 TO denotes to
T1617 17-25 VB denotes complete
T1618 26-29 DT denotes the
T1619 30-41 NN denotes replication
T1620 42-47 NN denotes cycle
T1621 47-48 . denotes .
T1622 49-51 IN denotes In
T1623 52-60 NN denotes addition
T1624 61-63 TO denotes to
T1625 64-67 DT denotes the
T1626 68-78 NN denotes inhibition
T1627 79-81 IN denotes of
T1628 82-87 NNP denotes HIV-1
T1629 87-88 , denotes ,
T1630 89-92 NNP denotes A3G
T1631 93-102 VBZ denotes restricts
T1632 103-114 NN denotes replication
T1633 115-117 IN denotes of
T1634 118-123 JJ denotes other
T1635 124-136 NNS denotes lentiviruses
T1636 136-137 , denotes ,
T1637 138-155 NNS denotes gammaretroviruses
T1638 155-156 , denotes ,
T1639 157-174 NNS denotes deltaretroviruses
T1640 174-175 , denotes ,
T1641 176-188 NNS denotes spumaviruses
T1642 188-189 , denotes ,
T1643 190-210 NN denotes long-terminal-repeat
T1644 211-212 -LRB- denotes (
T1645 212-215 NNP denotes LTR
T1646 215-216 -RRB- denotes )
T1647 216-217 : denotes -
T1648 217-233 NNS denotes retrotransposons
T1649 233-234 , denotes ,
T1650 235-254 NNS denotes orthohepadnaviruses
T1651 255-258 CC denotes and
T1652 259-276 NNS denotes avihepadnaviruses
T1653 277-278 -LRB- denotes (
T1654 278-279 CD denotes 9
T1655 280-282 CD denotes 21
T1656 282-283 -RRB- denotes )
T1657 283-284 . denotes .
T1658 285-298 RB denotes Interestingly
T1659 298-299 , denotes ,
T1660 300-311 NN denotes deamination
T1661 312-317 VBZ denotes seems
T1662 318-321 RB denotes not
T1663 322-324 TO denotes to
T1664 325-327 VB denotes be
T1665 328-331 DT denotes the
T1666 332-336 JJ denotes only
T1667 337-349 JJ denotes A3G-mediated
T1668 350-359 JJ denotes antiviral
T1669 360-369 NN denotes mechanism
T1670 369-370 : denotes ;
T1671 371-373 IN denotes in
T1672 374-377 DT denotes the
T1673 378-382 NN denotes case
T1674 383-385 IN denotes of
T1675 386-395 NNP denotes hepatitis
T1676 396-397 NNP denotes B
T1677 398-403 NN denotes virus
T1678 404-405 -LRB- denotes (
R1340 T1647 T1648 punct -,retrotransposons
R1342 T1648 T1643 conj retrotransposons,long-terminal-repeat
R1343 T1649 T1648 punct ",",retrotransposons
R1345 T1650 T1648 conj orthohepadnaviruses,retrotransposons
R1346 T1651 T1650 cc and,orthohepadnaviruses
R1349 T1652 T1650 conj avihepadnaviruses,orthohepadnaviruses
R1351 T1653 T1655 punct (,21
R1352 T1654 T1655 nummod 9,21
R1354 T1655 T1652 appos 21,avihepadnaviruses
R1355 T1656 T1652 punct ),avihepadnaviruses
R1357 T1657 T1631 punct .,restricts
R1358 T1658 T1661 advmod Interestingly,seems
R1359 T1659 T1661 punct ",",seems
R1361 T1660 T1661 nsubj deamination,seems
R1363 T1662 T1664 neg not,be
R1365 T1663 T1664 aux to,be
R1366 T1664 T1661 xcomp be,seems
R1368 T1665 T1669 det the,mechanism
R1385 T1672 T1673 det the,case
R1387 T1673 T1671 pobj case,in
R1388 T1674 T1673 prep of,case
R1389 T1675 T1676 compound hepatitis,B
R1391 T1676 T1677 compound B,virus
R1392 T1677 T1674 pobj virus,of
R1399 T1614 T1614 ROOT is,is
R1402 T1615 T1614 acomp able,is
R1410 T1616 T1617 aux to,complete
R1414 T1617 T1615 xcomp complete,able
R1418 T1618 T1620 det the,cycle
R1422 T1619 T1620 compound replication,cycle
R1426 T1620 T1617 dobj cycle,complete
R1429 T1621 T1614 punct .,is
R1433 T1622 T1631 prep In,restricts
R1437 T1623 T1622 pobj addition,In
R1441 T1624 T1623 prep to,addition
R1445 T1625 T1626 det the,inhibition
R1449 T1626 T1624 pobj inhibition,to
R1453 T1627 T1626 prep of,inhibition
R1460 T1628 T1627 pobj HIV-1,of
R1464 T1629 T1631 punct ",",restricts
R1468 T1630 T1631 nsubj A3G,restricts
R1470 T1631 T1631 ROOT restricts,restricts
R1472 T1632 T1631 dobj replication,restricts
R1475 T1633 T1632 prep of,replication
R1479 T1634 T1635 amod other,lentiviruses
R1482 T1635 T1633 pobj lentiviruses,of
R1485 T1636 T1635 punct ",",lentiviruses
R1486 T1637 T1635 conj gammaretroviruses,lentiviruses
R1487 T1638 T1637 punct ",",gammaretroviruses
R1488 T1639 T1637 conj deltaretroviruses,gammaretroviruses
R1489 T1640 T1639 punct ",",deltaretroviruses
R1491 T1641 T1639 conj spumaviruses,deltaretroviruses
R1494 T1642 T1641 punct ",",spumaviruses
R1496 T1643 T1641 conj long-terminal-repeat,spumaviruses
R1500 T1644 T1645 punct (,LTR
R1504 T1645 T1643 appos LTR,long-terminal-repeat
R1512 T1646 T1645 punct ),LTR
R1371 T1666 T1669 amod only,mechanism
R1374 T1667 T1669 amod A3G-mediated,mechanism
R1377 T1668 T1669 amod antiviral,mechanism
R1380 T1669 T1664 attr mechanism,be

sentences

Id Subject Object Predicate Lexical cue
T854 49-284 Sentence denotes In addition to the inhibition of HIV-1, A3G restricts replication of other lentiviruses, gammaretroviruses, deltaretroviruses, spumaviruses, long-terminal-repeat (LTR)-retrotransposons, orthohepadnaviruses and avihepadnaviruses (9–21).
T18 49-284 Sentence denotes In addition to the inhibition of HIV-1, A3G restricts replication of other lentiviruses, gammaretroviruses, deltaretroviruses, spumaviruses, long-terminal-repeat (LTR)-retrotransposons, orthohepadnaviruses and avihepadnaviruses (9–21).

2_test

Id Subject Object Predicate Lexical cue
17517765-15956565-77155581 280-282 15956565 denotes 21
17517765-15994766-77155581 280-282 15994766 denotes 21
17517765-15911774-77155581 280-282 15911774 denotes 21
17517765-15943885-77155581 280-282 15943885 denotes 21
17517765-16025511-77155581 280-282 16025511 denotes 21
17517765-16000409-77155581 280-282 16000409 denotes 21
17517765-16378963-77155581 280-282 16378963 denotes 21
17517765-15823539-77155581 280-282 15823539 denotes 21
17517765-15674295-77155581 280-282 15674295 denotes 21
17517765-15031497-77155581 280-282 15031497 denotes 21
17517765-15353783-77155581 280-282 15353783 denotes 21
17517765-15479843-77155581 280-282 15479843 denotes 21
17517765-12809610-77155581 280-282 12809610 denotes 21

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T1043 6-8 VB denotes is
T1044 9-13 JJ denotes able
T1045 14-16 TO denotes to
T1046 17-25 VB denotes complete
T1047 26-29 DT denotes the
T1048 30-41 NN denotes replication
T1049 42-47 NN denotes cycle
T1050 49-51 IN denotes In
T1051 52-60 NN denotes addition
T1052 61-63 TO denotes to
T1053 64-67 DT denotes the
T1054 68-78 NN denotes inhibition
T1055 79-81 IN denotes of
T1056 82-87 NN denotes HIV-1
T1057 87-88 -COMMA- denotes ,
T1058 89-92 NN denotes A3G
T1059 93-102 VB denotes restricts
T1060 103-114 NN denotes replication
T1061 115-117 IN denotes of
T1062 118-123 JJ denotes other
T1063 124-136 NN denotes lentiviruses
T1064 136-137 -COMMA- denotes ,
T1065 138-155 NN denotes gammaretroviruses
T1066 155-156 -COMMA- denotes ,
T1067 157-174 NN denotes deltaretroviruses
T1068 174-175 -COMMA- denotes ,
T1069 176-188 NN denotes spumaviruses
T1070 188-189 -COMMA- denotes ,
T1071 190-210 NN denotes long-terminal-repeat
T1072 211-212 -LRB- denotes (
T1073 212-215 NN denotes LTR
T1074 215-216 -RRB- denotes )
T1075 216-233 NN denotes -retrotransposons
T1076 233-234 -COMMA- denotes ,
T1077 235-254 NN denotes orthohepadnaviruses
T1078 255-258 CC denotes and
T1079 259-276 NN denotes avihepadnaviruses
T1080 277-278 -LRB- denotes (
T1081 278-282 CD denotes 9–21
T1082 282-283 -RRB- denotes )
T1083 285-298 RB denotes Interestingly
T1084 298-299 -COMMA- denotes ,
T1085 300-311 NN denotes deamination
T1086 312-317 VB denotes seems
T1087 318-321 RB denotes not
T1088 322-324 TO denotes to
T1089 325-327 VB denotes be
T1090 328-331 DT denotes the
T1091 332-336 JJ denotes only
T1092 337-349 JJ denotes A3G-mediated
T1093 350-359 JJ denotes antiviral
T1094 360-369 NN denotes mechanism
T1095 369-370 -COLON- denotes ;
T1096 371-373 IN denotes in
T1097 374-377 DT denotes the
T1098 378-382 NN denotes case
T1099 383-385 IN denotes of
T1100 386-395 NN denotes hepatitis
T1101 396-397 NN denotes B
T1102 398-403 NN denotes virus
T1103 404-405 -LRB- denotes (
R828 T1044 T1043 arg2Of able,is
R829 T1046 T1044 arg2Of complete,able
R830 T1046 T1045 arg1Of complete,to
R831 T1049 T1046 arg2Of cycle,complete
R832 T1049 T1047 arg1Of cycle,the
R833 T1049 T1048 arg1Of cycle,replication
R834 T1050 T1052 arg1Of In,to
R835 T1051 T1050 arg2Of addition,In
R836 T1054 T1050 arg3Of inhibition,In
R837 T1054 T1053 arg1Of inhibition,the
R838 T1054 T1055 arg1Of inhibition,of
R839 T1056 T1055 arg2Of HIV-1,of
R840 T1058 T1059 arg1Of A3G,restricts
R841 T1059 T1050 arg1Of restricts,In
R842 T1059 T1057 arg1Of restricts,","
R843 T1060 T1059 arg2Of replication,restricts
R844 T1060 T1061 arg1Of replication,of
R845 T1063 T1062 arg1Of lentiviruses,other
R846 T1063 T1064 arg1Of lentiviruses,","
R847 T1064 T1066 arg1Of ",",","
R848 T1065 T1064 arg2Of gammaretroviruses,","
R849 T1066 T1068 arg1Of ",",","
R850 T1067 T1066 arg2Of deltaretroviruses,","
R851 T1068 T1061 arg2Of ",",of
R852 T1068 T1070 arg1Of ",",","
R853 T1069 T1068 arg2Of spumaviruses,","
R854 T1071 T1070 arg2Of long-terminal-repeat,","
R855 T1071 T1072 arg1Of long-terminal-repeat,(
R856 T1073 T1072 arg2Of LTR,(
R857 T1074 T1072 arg3Of ),(
R858 T1075 T1076 arg1Of -retrotransposons,","
R859 T1076 T1078 arg1Of ",",and
R860 T1077 T1076 arg2Of orthohepadnaviruses,","
R861 T1078 T1059 arg3Of and,restricts
R862 T1078 T1080 arg1Of and,(
R863 T1079 T1078 arg2Of avihepadnaviruses,and
R864 T1081 T1080 arg2Of 9–21,(
R865 T1082 T1080 arg3Of ),(
R866 T1085 T1086 arg1Of deamination,seems
R867 T1085 T1089 arg1Of deamination,be
R868 T1086 T1083 arg1Of seems,Interestingly
R869 T1086 T1084 arg1Of seems,","
R870 T1086 T1095 arg1Of seems,;
R871 T1089 T1086 arg2Of be,seems
R872 T1089 T1087 arg1Of be,not
R873 T1089 T1088 arg1Of be,to
R874 T1094 T1089 arg2Of mechanism,be
R875 T1094 T1090 arg1Of mechanism,the
R876 T1094 T1091 arg1Of mechanism,only
R877 T1094 T1092 arg1Of mechanism,A3G-mediated
R878 T1094 T1093 arg1Of mechanism,antiviral
R879 T1098 T1096 arg2Of case,in
R880 T1098 T1097 arg1Of case,the
R881 T1098 T1099 arg1Of case,of
R882 T1102 T1100 arg1Of virus,hepatitis
R883 T1102 T1101 arg1Of virus,B
R884 T1102 T1103 arg1Of virus,(

events-check-again

Id Subject Object Predicate Lexical cue
T2246 89-92 Protein denotes A3G
T2247 337-340 Protein denotes A3G

bionlp-st-ge-2016-reference

Id Subject Object Predicate Lexical cue
T813 89-92 Protein denotes A3G
T814 337-340 Protein denotes A3G

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T1407 9-13 P00519 denotes able
T1408 89-92 Q9HC16 denotes A3G
T1409 337-340 Q9HC16 denotes A3G