PMC:1920263 / 23468-23708 JSONTXT

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    test2

    {"project":"test2","denotations":[{"id":"T8722","span":{"begin":76,"end":79},"obj":"Protein"},{"id":"T8723","span":{"begin":109,"end":118},"obj":"Gene_expression"},{"id":"T8724","span":{"begin":125,"end":128},"obj":"Protein"},{"id":"T8725","span":{"begin":142,"end":145},"obj":"Protein"}],"relations":[{"id":"R7163","pred":"themeOf","subj":"T8724","obj":"T8723"},{"id":"R7164","pred":"themeOf","subj":"T8725","obj":"T8723"}],"attributes":[{"id":"M40","pred":"Negation","subj":"T8725","obj":"true"}],"text":"To investigate whether the overexpression of HIV-1 proteins also influences A3G promoter activity, we either expressed HIV-1 Vif or the HIV-1 Tat protein, the latter has been shown to activate different viral and cellular promoters (44,45)."}

    GO-BP

    {"project":"GO-BP","denotations":[{"id":"T8859","span":{"begin":213,"end":221},"obj":"http://purl.obolibrary.org/obo/GO_0007349"}],"text":"To investigate whether the overexpression of HIV-1 proteins also influences A3G promoter activity, we either expressed HIV-1 Vif or the HIV-1 Tat protein, the latter has been shown to activate different viral and cellular promoters (44,45)."}

    bionlp-st-ge-2016-spacy-parsed

    {"project":"bionlp-st-ge-2016-spacy-parsed","denotations":[{"id":"T9421","span":{"begin":0,"end":2},"obj":"TO"},{"id":"T9422","span":{"begin":3,"end":14},"obj":"VB"},{"id":"T9423","span":{"begin":15,"end":22},"obj":"IN"},{"id":"T9424","span":{"begin":23,"end":26},"obj":"DT"},{"id":"T9425","span":{"begin":27,"end":41},"obj":"NN"},{"id":"T9426","span":{"begin":42,"end":44},"obj":"IN"},{"id":"T9427","span":{"begin":45,"end":50},"obj":"JJ"},{"id":"T9428","span":{"begin":51,"end":59},"obj":"NNS"},{"id":"T9429","span":{"begin":60,"end":64},"obj":"RB"},{"id":"T9430","span":{"begin":65,"end":75},"obj":"VBZ"},{"id":"T9431","span":{"begin":76,"end":79},"obj":"CD"},{"id":"T9432","span":{"begin":80,"end":88},"obj":"NN"},{"id":"T9433","span":{"begin":89,"end":97},"obj":"NN"},{"id":"T9434","span":{"begin":97,"end":98},"obj":","},{"id":"T9435","span":{"begin":99,"end":101},"obj":"PRP"},{"id":"T9436","span":{"begin":102,"end":108},"obj":"RB"},{"id":"T9437","span":{"begin":109,"end":118},"obj":"VBD"},{"id":"T9438","span":{"begin":119,"end":124},"obj":"NNP"},{"id":"T9439","span":{"begin":125,"end":128},"obj":"NNP"},{"id":"T9440","span":{"begin":129,"end":131},"obj":"CC"},{"id":"T9441","span":{"begin":132,"end":135},"obj":"DT"},{"id":"T9442","span":{"begin":136,"end":141},"obj":"NNP"},{"id":"T9443","span":{"begin":142,"end":145},"obj":"NNP"},{"id":"T9444","span":{"begin":146,"end":153},"obj":"NN"},{"id":"T9445","span":{"begin":153,"end":154},"obj":","},{"id":"T9446","span":{"begin":155,"end":158},"obj":"DT"},{"id":"T9447","span":{"begin":159,"end":165},"obj":"NN"},{"id":"T9448","span":{"begin":166,"end":169},"obj":"VBZ"},{"id":"T9449","span":{"begin":170,"end":174},"obj":"VBN"},{"id":"T9450","span":{"begin":175,"end":180},"obj":"VBN"},{"id":"T9451","span":{"begin":181,"end":183},"obj":"TO"},{"id":"T9452","span":{"begin":184,"end":192},"obj":"VB"},{"id":"T9453","span":{"begin":193,"end":202},"obj":"JJ"},{"id":"T9454","span":{"begin":203,"end":208},"obj":"JJ"},{"id":"T9455","span":{"begin":209,"end":212},"obj":"CC"},{"id":"T9456","span":{"begin":213,"end":221},"obj":"JJ"},{"id":"T9457","span":{"begin":222,"end":231},"obj":"NNS"},{"id":"T9458","span":{"begin":232,"end":233},"obj":"-LRB-"},{"id":"T9459","span":{"begin":233,"end":238},"obj":"CD"},{"id":"T9460","span":{"begin":238,"end":239},"obj":"-RRB-"},{"id":"T9461","span":{"begin":239,"end":240},"obj":"."}],"relations":[{"id":"R7762","pred":"aux","subj":"T9421","obj":"T9422"},{"id":"R7763","pred":"advcl","subj":"T9422","obj":"T9437"},{"id":"R7764","pred":"mark","subj":"T9423","obj":"T9430"},{"id":"R7765","pred":"det","subj":"T9424","obj":"T9425"},{"id":"R7766","pred":"nsubj","subj":"T9425","obj":"T9430"},{"id":"R7767","pred":"prep","subj":"T9426","obj":"T9425"},{"id":"R7768","pred":"compound","subj":"T9427","obj":"T9428"},{"id":"R7769","pred":"pobj","subj":"T9428","obj":"T9426"},{"id":"R7770","pred":"advmod","subj":"T9429","obj":"T9430"},{"id":"R7771","pred":"advcl","subj":"T9430","obj":"T9437"},{"id":"R7772","pred":"nummod","subj":"T9431","obj":"T9433"},{"id":"R7773","pred":"compound","subj":"T9432","obj":"T9433"},{"id":"R7774","pred":"dobj","subj":"T9433","obj":"T9430"},{"id":"R7775","pred":"punct","subj":"T9434","obj":"T9437"},{"id":"R7776","pred":"nsubj","subj":"T9435","obj":"T9437"},{"id":"R7777","pred":"preconj","subj":"T9436","obj":"T9437"},{"id":"R7778","pred":"ROOT","subj":"T9437","obj":"T9437"},{"id":"R7779","pred":"compound","subj":"T9438","obj":"T9439"},{"id":"R7780","pred":"dobj","subj":"T9439","obj":"T9437"},{"id":"R7781","pred":"cc","subj":"T9440","obj":"T9439"},{"id":"R7782","pred":"det","subj":"T9441","obj":"T9444"},{"id":"R7783","pred":"compound","subj":"T9442","obj":"T9443"},{"id":"R7784","pred":"compound","subj":"T9443","obj":"T9444"},{"id":"R7785","pred":"conj","subj":"T9444","obj":"T9439"},{"id":"R7786","pred":"punct","subj":"T9445","obj":"T9450"},{"id":"R7787","pred":"det","subj":"T9446","obj":"T9447"},{"id":"R7788","pred":"nsubjpass","subj":"T9447","obj":"T9450"},{"id":"R7789","pred":"aux","subj":"T9448","obj":"T9450"},{"id":"R7790","pred":"auxpass","subj":"T9449","obj":"T9450"},{"id":"R7791","pred":"conj","subj":"T9450","obj":"T9437"},{"id":"R7792","pred":"aux","subj":"T9451","obj":"T9452"},{"id":"R7793","pred":"xcomp","subj":"T9452","obj":"T9450"},{"id":"R7794","pred":"amod","subj":"T9453","obj":"T9457"},{"id":"R7795","pred":"amod","subj":"T9454","obj":"T9457"},{"id":"R7796","pred":"cc","subj":"T9455","obj":"T9454"},{"id":"R7797","pred":"conj","subj":"T9456","obj":"T9454"},{"id":"R7798","pred":"dobj","subj":"T9457","obj":"T9452"},{"id":"R7799","pred":"punct","subj":"T9458","obj":"T9457"},{"id":"R7800","pred":"appos","subj":"T9459","obj":"T9457"},{"id":"R7801","pred":"punct","subj":"T9460","obj":"T9457"},{"id":"R7802","pred":"punct","subj":"T9461","obj":"T9450"}],"text":"To investigate whether the overexpression of HIV-1 proteins also influences A3G promoter activity, we either expressed HIV-1 Vif or the HIV-1 Tat protein, the latter has been shown to activate different viral and cellular promoters (44,45)."}

    sentences

    {"project":"sentences","denotations":[{"id":"T8845","span":{"begin":0,"end":240},"obj":"Sentence"},{"id":"T172","span":{"begin":0,"end":240},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"To investigate whether the overexpression of HIV-1 proteins also influences A3G promoter activity, we either expressed HIV-1 Vif or the HIV-1 Tat protein, the latter has been shown to activate different viral and cellular promoters (44,45)."}

    2_test

    {"project":"2_test","denotations":[{"id":"17517765-14981150-77155605","span":{"begin":233,"end":235},"obj":"14981150"},{"id":"17517765-9045614-77155606","span":{"begin":236,"end":238},"obj":"9045614"}],"text":"To investigate whether the overexpression of HIV-1 proteins also influences A3G promoter activity, we either expressed HIV-1 Vif or the HIV-1 Tat protein, the latter has been shown to activate different viral and cellular promoters (44,45)."}

    pmc-enju-pas

    {"project":"pmc-enju-pas","denotations":[{"id":"T8929","span":{"begin":0,"end":2},"obj":"TO"},{"id":"T8930","span":{"begin":3,"end":14},"obj":"VB"},{"id":"T8931","span":{"begin":15,"end":22},"obj":"IN"},{"id":"T8932","span":{"begin":23,"end":26},"obj":"DT"},{"id":"T8933","span":{"begin":27,"end":41},"obj":"NN"},{"id":"T8934","span":{"begin":42,"end":44},"obj":"IN"},{"id":"T8935","span":{"begin":45,"end":50},"obj":"NN"},{"id":"T8936","span":{"begin":51,"end":59},"obj":"NN"},{"id":"T8937","span":{"begin":60,"end":64},"obj":"RB"},{"id":"T8938","span":{"begin":65,"end":75},"obj":"VB"},{"id":"T8939","span":{"begin":76,"end":79},"obj":"NN"},{"id":"T8940","span":{"begin":80,"end":88},"obj":"NN"},{"id":"T8941","span":{"begin":89,"end":97},"obj":"NN"},{"id":"T8942","span":{"begin":97,"end":98},"obj":"-COMMA-"},{"id":"T8943","span":{"begin":99,"end":101},"obj":"PRP"},{"id":"T8944","span":{"begin":102,"end":108},"obj":"CC"},{"id":"T8945","span":{"begin":109,"end":118},"obj":"VB"},{"id":"T8946","span":{"begin":119,"end":124},"obj":"NN"},{"id":"T8947","span":{"begin":125,"end":128},"obj":"NN"},{"id":"T8948","span":{"begin":129,"end":131},"obj":"CC"},{"id":"T8949","span":{"begin":132,"end":135},"obj":"DT"},{"id":"T8950","span":{"begin":136,"end":141},"obj":"NN"},{"id":"T8951","span":{"begin":142,"end":145},"obj":"NN"},{"id":"T8952","span":{"begin":146,"end":153},"obj":"NN"},{"id":"T8953","span":{"begin":153,"end":154},"obj":"-COMMA-"},{"id":"T8954","span":{"begin":155,"end":158},"obj":"DT"},{"id":"T8955","span":{"begin":159,"end":165},"obj":"JJ"},{"id":"T8956","span":{"begin":166,"end":169},"obj":"VB"},{"id":"T8957","span":{"begin":170,"end":174},"obj":"VB"},{"id":"T8958","span":{"begin":175,"end":180},"obj":"VB"},{"id":"T8959","span":{"begin":181,"end":183},"obj":"TO"},{"id":"T8960","span":{"begin":184,"end":192},"obj":"VB"},{"id":"T8961","span":{"begin":193,"end":202},"obj":"JJ"},{"id":"T8962","span":{"begin":203,"end":208},"obj":"JJ"},{"id":"T8963","span":{"begin":209,"end":212},"obj":"CC"},{"id":"T8964","span":{"begin":213,"end":221},"obj":"JJ"},{"id":"T8965","span":{"begin":222,"end":231},"obj":"NN"},{"id":"T8966","span":{"begin":232,"end":233},"obj":"-LRB-"},{"id":"T8967","span":{"begin":233,"end":238},"obj":"CD"},{"id":"T8968","span":{"begin":238,"end":239},"obj":"-RRB-"}],"relations":[{"id":"R7295","pred":"arg1Of","subj":"T8930","obj":"T8929"},{"id":"R7296","pred":"arg1Of","subj":"T8933","obj":"T8932"},{"id":"R7297","pred":"arg1Of","subj":"T8933","obj":"T8934"},{"id":"R7298","pred":"arg1Of","subj":"T8933","obj":"T8938"},{"id":"R7299","pred":"arg2Of","subj":"T8936","obj":"T8934"},{"id":"R7300","pred":"arg1Of","subj":"T8936","obj":"T8935"},{"id":"R7301","pred":"arg2Of","subj":"T8938","obj":"T8930"},{"id":"R7302","pred":"arg1Of","subj":"T8938","obj":"T8931"},{"id":"R7303","pred":"arg1Of","subj":"T8938","obj":"T8937"},{"id":"R7304","pred":"arg2Of","subj":"T8941","obj":"T8938"},{"id":"R7305","pred":"arg1Of","subj":"T8941","obj":"T8939"},{"id":"R7306","pred":"arg1Of","subj":"T8941","obj":"T8940"},{"id":"R7307","pred":"arg1Of","subj":"T8943","obj":"T8930"},{"id":"R7308","pred":"arg1Of","subj":"T8943","obj":"T8945"},{"id":"R7309","pred":"arg1Of","subj":"T8945","obj":"T8944"},{"id":"R7310","pred":"arg1Of","subj":"T8945","obj":"T8953"},{"id":"R7311","pred":"arg1Of","subj":"T8947","obj":"T8946"},{"id":"R7312","pred":"arg1Of","subj":"T8947","obj":"T8948"},{"id":"R7313","pred":"arg2Of","subj":"T8948","obj":"T8945"},{"id":"R7314","pred":"arg2Of","subj":"T8952","obj":"T8948"},{"id":"R7315","pred":"arg1Of","subj":"T8952","obj":"T8949"},{"id":"R7316","pred":"arg1Of","subj":"T8952","obj":"T8950"},{"id":"R7317","pred":"arg1Of","subj":"T8952","obj":"T8951"},{"id":"R7318","pred":"modOf","subj":"T8953","obj":"T8929"},{"id":"R7319","pred":"arg1Of","subj":"T8953","obj":"T8942"},{"id":"R7320","pred":"arg1Of","subj":"T8955","obj":"T8954"},{"id":"R7321","pred":"arg1Of","subj":"T8955","obj":"T8956"},{"id":"R7322","pred":"arg1Of","subj":"T8955","obj":"T8957"},{"id":"R7323","pred":"arg2Of","subj":"T8955","obj":"T8958"},{"id":"R7324","pred":"arg1Of","subj":"T8955","obj":"T8960"},{"id":"R7325","pred":"arg2Of","subj":"T8958","obj":"T8953"},{"id":"R7326","pred":"arg2Of","subj":"T8958","obj":"T8956"},{"id":"R7327","pred":"arg2Of","subj":"T8958","obj":"T8957"},{"id":"R7328","pred":"arg3Of","subj":"T8960","obj":"T8958"},{"id":"R7329","pred":"arg1Of","subj":"T8960","obj":"T8959"},{"id":"R7330","pred":"arg1Of","subj":"T8962","obj":"T8963"},{"id":"R7331","pred":"arg2Of","subj":"T8964","obj":"T8963"},{"id":"R7332","pred":"arg2Of","subj":"T8965","obj":"T8960"},{"id":"R7333","pred":"arg1Of","subj":"T8965","obj":"T8961"},{"id":"R7334","pred":"arg1Of","subj":"T8965","obj":"T8962"},{"id":"R7335","pred":"arg1Of","subj":"T8965","obj":"T8964"},{"id":"R7336","pred":"arg1Of","subj":"T8965","obj":"T8966"},{"id":"R7337","pred":"arg2Of","subj":"T8967","obj":"T8966"},{"id":"R7338","pred":"arg3Of","subj":"T8968","obj":"T8966"}],"namespaces":[{"prefix":"_base","uri":"http://kmcs.nii.ac.jp/enju/"}],"text":"To investigate whether the overexpression of HIV-1 proteins also influences A3G promoter activity, we either expressed HIV-1 Vif or the HIV-1 Tat protein, the latter has been shown to activate different viral and cellular promoters (44,45)."}

    events-check-again

    {"project":"events-check-again","denotations":[{"id":"T10151","span":{"begin":76,"end":79},"obj":"Protein"},{"id":"T10152","span":{"begin":109,"end":118},"obj":"Gene_expression"},{"id":"T10153","span":{"begin":109,"end":118},"obj":"Gene_expression"},{"id":"T10154","span":{"begin":125,"end":128},"obj":"Protein"},{"id":"T10155","span":{"begin":142,"end":145},"obj":"Protein"}],"relations":[{"id":"R8327","pred":"themeOf","subj":"T10154","obj":"T10152"},{"id":"R8328","pred":"themeOf","subj":"T10155","obj":"T10153"}],"text":"To investigate whether the overexpression of HIV-1 proteins also influences A3G promoter activity, we either expressed HIV-1 Vif or the HIV-1 Tat protein, the latter has been shown to activate different viral and cellular promoters (44,45)."}

    bionlp-st-ge-2016-reference-tees

    {"project":"bionlp-st-ge-2016-reference-tees","denotations":[{"id":"T10198","span":{"begin":76,"end":88},"obj":"Protein"},{"id":"T10199","span":{"begin":119,"end":128},"obj":"Protein"},{"id":"T10200","span":{"begin":136,"end":153},"obj":"Protein"},{"id":"T10201","span":{"begin":109,"end":118},"obj":"Gene_expression"},{"id":"T10202","span":{"begin":109,"end":118},"obj":"Gene_expression"}],"relations":[{"id":"R8346","pred":"themeOf","subj":"T10199","obj":"T10201"},{"id":"R8347","pred":"themeOf","subj":"T10200","obj":"T10202"}],"text":"To investigate whether the overexpression of HIV-1 proteins also influences A3G promoter activity, we either expressed HIV-1 Vif or the HIV-1 Tat protein, the latter has been shown to activate different viral and cellular promoters (44,45)."}

    bionlp-st-ge-2016-reference

    {"project":"bionlp-st-ge-2016-reference","denotations":[{"id":"T8777","span":{"begin":76,"end":79},"obj":"Protein"},{"id":"T8778","span":{"begin":109,"end":118},"obj":"Gene_expression"},{"id":"T8779","span":{"begin":109,"end":118},"obj":"Gene_expression"},{"id":"T8780","span":{"begin":125,"end":128},"obj":"Protein"},{"id":"T8781","span":{"begin":142,"end":145},"obj":"Protein"}],"relations":[{"id":"R7190","pred":"themeOf","subj":"T8780","obj":"T8778"},{"id":"R7191","pred":"themeOf","subj":"T8781","obj":"T8779"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}],"text":"To investigate whether the overexpression of HIV-1 proteins also influences A3G promoter activity, we either expressed HIV-1 Vif or the HIV-1 Tat protein, the latter has been shown to activate different viral and cellular promoters (44,45)."}

    bionlp-st-ge-2016-uniprot

    {"project":"bionlp-st-ge-2016-uniprot","denotations":[{"id":"T9349","span":{"begin":76,"end":79},"obj":"Q9HC16"},{"id":"T9350","span":{"begin":125,"end":128},"obj":"P12504"},{"id":"T9351","span":{"begin":142,"end":145},"obj":"P04608"},{"id":"T9352","span":{"begin":142,"end":145},"obj":"P04610"},{"id":"T9353","span":{"begin":142,"end":145},"obj":"Q8UMQ1"},{"id":"T9354","span":{"begin":142,"end":145},"obj":"P04605"}],"namespaces":[{"prefix":"_base","uri":"http://www.uniprot.org/uniprot/"}],"text":"To investigate whether the overexpression of HIV-1 proteins also influences A3G promoter activity, we either expressed HIV-1 Vif or the HIV-1 Tat protein, the latter has been shown to activate different viral and cellular promoters (44,45)."}