
PMC:1920263 / 22225-23087
Annnotations
test2
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T18804 | 10-20 | Protein | denotes | Luciferase |
T18805 | 35-38 | Protein | denotes | A3G |
T18806 | 88-91 | Protein | denotes | A3G |
T18807 | 171-181 | Protein | denotes | luciferase |
T18808 | 358-361 | Protein | denotes | A3G |
T18809 | 441-444 | Protein | denotes | A3G |
T18810 | 475-478 | Protein | denotes | A3G |
T18811 | 602-605 | Protein | denotes | A3G |
T18812 | 669-679 | Protein | denotes | luciferase |
T18813 | 695-705 | Protein | denotes | luciferase |
T18814 | 736-747 | Gene_expression | denotes | coexpressed |
T18815 | 756-766 | Protein | denotes | luciferase |
R15292 | T18813 | T18814 | themeOf | luciferase,coexpressed |
R15293 | T18815 | T18814 | themeOf | luciferase,coexpressed |
GO-CC
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T19182 | 72-76 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cell |
T19183 | 540-544 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cell |
T19184 | 644-649 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
GO-MF
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T19167 | 10-31 | http://purl.obolibrary.org/obo/GO_0045289 | denotes | Luciferase activities |
T19168 | 695-716 | http://purl.obolibrary.org/obo/GO_0045289 | denotes | luciferase activities |
T19169 | 756-777 | http://purl.obolibrary.org/obo/GO_0045289 | denotes | luciferase activities |
T19170 | 10-31 | http://purl.obolibrary.org/obo/GO_0047077 | denotes | Luciferase activities |
T19171 | 695-716 | http://purl.obolibrary.org/obo/GO_0047077 | denotes | luciferase activities |
T19172 | 756-777 | http://purl.obolibrary.org/obo/GO_0047077 | denotes | luciferase activities |
T19173 | 10-31 | http://purl.obolibrary.org/obo/GO_0047712 | denotes | Luciferase activities |
T19174 | 695-716 | http://purl.obolibrary.org/obo/GO_0047712 | denotes | luciferase activities |
T19175 | 756-777 | http://purl.obolibrary.org/obo/GO_0047712 | denotes | luciferase activities |
T19176 | 10-31 | http://purl.obolibrary.org/obo/GO_0050248 | denotes | Luciferase activities |
T19177 | 695-716 | http://purl.obolibrary.org/obo/GO_0050248 | denotes | luciferase activities |
T19178 | 756-777 | http://purl.obolibrary.org/obo/GO_0050248 | denotes | luciferase activities |
T19179 | 10-31 | http://purl.obolibrary.org/obo/GO_0050397 | denotes | Luciferase activities |
T19180 | 695-716 | http://purl.obolibrary.org/obo/GO_0050397 | denotes | luciferase activities |
T19181 | 756-777 | http://purl.obolibrary.org/obo/GO_0050397 | denotes | luciferase activities |
GO-BP
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T18838 | 10-31 | http://purl.obolibrary.org/obo/GO_0045289 | denotes | Luciferase activities |
T18839 | 695-716 | http://purl.obolibrary.org/obo/GO_0045289 | denotes | luciferase activities |
T18840 | 756-777 | http://purl.obolibrary.org/obo/GO_0045289 | denotes | luciferase activities |
T18841 | 10-31 | http://purl.obolibrary.org/obo/GO_0047077 | denotes | Luciferase activities |
T18842 | 695-716 | http://purl.obolibrary.org/obo/GO_0047077 | denotes | luciferase activities |
T18843 | 756-777 | http://purl.obolibrary.org/obo/GO_0047077 | denotes | luciferase activities |
T18844 | 10-31 | http://purl.obolibrary.org/obo/GO_0047712 | denotes | Luciferase activities |
T18845 | 695-716 | http://purl.obolibrary.org/obo/GO_0047712 | denotes | luciferase activities |
T18846 | 756-777 | http://purl.obolibrary.org/obo/GO_0047712 | denotes | luciferase activities |
T18847 | 10-31 | http://purl.obolibrary.org/obo/GO_0050248 | denotes | Luciferase activities |
T18848 | 695-716 | http://purl.obolibrary.org/obo/GO_0050248 | denotes | luciferase activities |
T18849 | 756-777 | http://purl.obolibrary.org/obo/GO_0050248 | denotes | luciferase activities |
T18850 | 10-31 | http://purl.obolibrary.org/obo/GO_0050397 | denotes | Luciferase activities |
T18851 | 695-716 | http://purl.obolibrary.org/obo/GO_0050397 | denotes | luciferase activities |
T18852 | 756-777 | http://purl.obolibrary.org/obo/GO_0050397 | denotes | luciferase activities |
bionlp-st-ge-2016-spacy-parsed
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T19012 | 10-20 | NNP | denotes | Luciferase |
T19013 | 21-31 | NNS | denotes | activities |
T19014 | 32-34 | IN | denotes | of |
T19015 | 35-38 | NNP | denotes | A3G |
T19016 | 39-47 | NN | denotes | promoter |
T19017 | 48-58 | NNS | denotes | constructs |
T19018 | 59-61 | IN | denotes | in |
T19019 | 62-71 | JJ | denotes | different |
T19020 | 72-76 | NN | denotes | cell |
T19021 | 77-82 | NNS | denotes | lines |
T19022 | 82-83 | . | denotes | . |
T19023 | 84-85 | -LRB- | denotes | ( |
T19024 | 85-86 | NNP | denotes | A |
T19025 | 86-87 | -RRB- | denotes | ) |
T19026 | 88-91 | NNP | denotes | A3G |
T19027 | 92-100 | NN | denotes | promoter |
T19028 | 101-102 | CD | denotes | 5 |
T19029 | 102-103 | NN | denotes | ′ |
T19030 | 104-112 | NN | denotes | deletion |
T19031 | 113-123 | NNS | denotes | constructs |
T19032 | 124-126 | IN | denotes | of |
T19033 | 127-136 | JJ | denotes | different |
T19034 | 137-142 | NNS | denotes | sizes |
T19035 | 143-147 | VBD | denotes | were |
T19036 | 148-154 | VBN | denotes | cloned |
T19037 | 155-159 | IN | denotes | into |
T19038 | 160-170 | JJ | denotes | pGL3-Basic |
T19039 | 171-181 | NN | denotes | luciferase |
T19040 | 182-190 | NN | denotes | reporter |
T19041 | 191-199 | NNS | denotes | plasmids |
T19042 | 199-200 | . | denotes | . |
T19043 | 201-210 | VBG | denotes | Numbering |
T19044 | 211-213 | VBZ | denotes | is |
T19045 | 214-222 | JJ | denotes | relative |
T19046 | 223-225 | TO | denotes | to |
T19047 | 226-229 | DT | denotes | the |
T19048 | 230-235 | JJ | denotes | major |
T19049 | 236-239 | NNP | denotes | TSS |
T19050 | 239-240 | . | denotes | . |
T19051 | 241-242 | DT | denotes | A |
T19052 | 243-251 | JJ | denotes | putative |
T19053 | 252-259 | JJ | denotes | Sp1/Sp3 |
T19054 | 260-269 | NN | denotes | consensus |
T19055 | 270-274 | NN | denotes | site |
T19056 | 275-276 | -LRB- | denotes | ( |
T19057 | 276-280 | JJ | denotes | gray |
T19058 | 281-287 | NN | denotes | square |
T19059 | 287-288 | -RRB- | denotes | ) |
T19060 | 289-291 | VBZ | denotes | is |
T19061 | 292-300 | VBN | denotes | depicted |
T19062 | 300-301 | . | denotes | . |
T19063 | 302-303 | -LRB- | denotes | ( |
T19064 | 303-304 | NNP | denotes | B |
T19065 | 304-305 | -RRB- | denotes | ) |
T19066 | 306-308 | NNP | denotes | A3 |
T19067 | 308-311 | CD | denotes | .01 |
T19068 | 312-313 | NNP | denotes | T |
T19069 | 314-319 | NNS | denotes | cells |
T19070 | 320-324 | VBD | denotes | were |
T19071 | 325-336 | RB | denotes | transiently |
T19072 | 337-348 | VBN | denotes | transfected |
T19073 | 349-353 | IN | denotes | with |
T19074 | 354-357 | DT | denotes | the |
T19075 | 358-361 | NNP | denotes | A3G |
T19076 | 362-370 | NN | denotes | promoter |
T19077 | 371-379 | NN | denotes | deletion |
T19078 | 380-390 | NNS | denotes | constructs |
T19079 | 390-391 | . | denotes | . |
T19080 | 392-399 | NNS | denotes | Numbers |
T19081 | 400-402 | IN | denotes | on |
T19082 | 403-406 | DT | denotes | the |
T19083 | 407-413 | JJ | denotes | x-axis |
T19084 | 414-419 | VBP | denotes | refer |
T19085 | 420-422 | TO | denotes | to |
T19086 | 423-426 | DT | denotes | the |
T19087 | 427-433 | NN | denotes | length |
T19088 | 434-436 | IN | denotes | of |
T19089 | 437-440 | DT | denotes | the |
T19090 | 441-444 | NNP | denotes | A3G |
T19091 | 445-453 | NN | denotes | promoter |
T19092 | 454-463 | NNS | denotes | fragments |
T19093 | 464-466 | IN | denotes | in |
T19094 | 467-469 | NN | denotes | bp |
T19095 | 469-470 | . | denotes | . |
T19096 | 471-472 | -LRB- | denotes | ( |
T19097 | 472-473 | NNP | denotes | C |
T19098 | 473-474 | -RRB- | denotes | ) |
T19099 | 475-478 | NNP | denotes | A3G |
T19100 | 479-487 | NN | denotes | promoter |
T19101 | 488-496 | NNS | denotes | plasmids |
T19102 | 497-501 | VBD | denotes | were |
T19103 | 502-513 | VBN | denotes | transfected |
T19104 | 514-518 | IN | denotes | into |
T19105 | 519-523 | NNP | denotes | U937 |
T19106 | 523-524 | , | denotes | , |
T19107 | 525-530 | NNP | denotes | HepG2 |
T19108 | 531-534 | CC | denotes | and |
T19109 | 535-539 | NNP | denotes | Huh7 |
T19110 | 540-544 | NN | denotes | cell |
T19111 | 545-550 | NNS | denotes | lines |
T19112 | 550-551 | . | denotes | . |
T19113 | 552-559 | NNS | denotes | Numbers |
T19114 | 560-562 | IN | denotes | in |
T19115 | 563-566 | DT | denotes | the |
T19116 | 567-574 | NNS | denotes | legends |
T19117 | 575-580 | VBP | denotes | refer |
T19118 | 581-583 | TO | denotes | to |
T19119 | 584-587 | DT | denotes | the |
T19120 | 588-594 | NN | denotes | length |
T19121 | 595-597 | IN | denotes | of |
T19122 | 598-601 | DT | denotes | the |
T19123 | 602-605 | NNP | denotes | A3G |
T19124 | 606-614 | NN | denotes | promoter |
T19125 | 615-624 | NNS | denotes | fragments |
T19126 | 625-627 | IN | denotes | in |
T19127 | 628-630 | NN | denotes | bp |
T19128 | 630-631 | . | denotes | . |
T19129 | 632-637 | IN | denotes | After |
T19130 | 638-640 | CD | denotes | 48 |
T19131 | 641-642 | NN | denotes | h |
T19132 | 642-643 | , | denotes | , |
T19133 | 644-649 | NNS | denotes | cells |
T19134 | 650-654 | VBD | denotes | were |
T19135 | 655-664 | VBN | denotes | harvested |
T19136 | 665-668 | IN | denotes | for |
T19137 | 669-679 | NN | denotes | luciferase |
T19138 | 680-685 | NN | denotes | assay |
T19139 | 685-686 | . | denotes | . |
T19140 | 687-694 | RB | denotes | Firefly |
T19141 | 695-705 | JJ | denotes | luciferase |
T19142 | 706-716 | NNS | denotes | activities |
T19143 | 717-721 | VBD | denotes | were |
T19144 | 722-732 | VBN | denotes | normalized |
T19145 | 733-735 | TO | denotes | to |
T19146 | 736-747 | VBN | denotes | coexpressed |
T19147 | 748-755 | NN | denotes | renilla |
T19148 | 756-766 | NN | denotes | luciferase |
T19149 | 767-777 | NNS | denotes | activities |
T19150 | 777-778 | . | denotes | . |
T19151 | 779-783 | VB | denotes | Mean |
T19152 | 784-790 | NNS | denotes | values |
T19153 | 791-792 | -LRB- | denotes | ( |
T19154 | 792-793 | CD | denotes | ± |
T19155 | 793-795 | NNP | denotes | SD |
T19156 | 795-796 | -RRB- | denotes | ) |
T19157 | 797-799 | IN | denotes | of |
T19158 | 800-801 | DT | denotes | a |
T19159 | 802-816 | NN | denotes | representative |
T19160 | 817-827 | NN | denotes | experiment |
T19161 | 828-837 | VBN | denotes | performed |
T19162 | 838-840 | IN | denotes | in |
T19163 | 841-851 | NN | denotes | triplicate |
T19164 | 852-855 | VBP | denotes | are |
T19165 | 856-861 | VBN | denotes | shown |
T19166 | 861-862 | . | denotes | . |
R15438 | T19012 | T19013 | compound | Luciferase,activities |
R15439 | T19013 | T19013 | ROOT | activities,activities |
R15440 | T19014 | T19013 | prep | of,activities |
R15441 | T19015 | T19016 | compound | A3G,promoter |
R15442 | T19016 | T19017 | compound | promoter,constructs |
R15443 | T19017 | T19014 | pobj | constructs,of |
R15444 | T19018 | T19013 | prep | in,activities |
R15445 | T19019 | T19021 | amod | different,lines |
R15446 | T19020 | T19021 | compound | cell,lines |
R15447 | T19021 | T19018 | pobj | lines,in |
R15448 | T19022 | T19013 | punct | .,activities |
R15449 | T19023 | T19036 | punct | (,cloned |
R15450 | T19024 | T19027 | det | A,promoter |
R15451 | T19025 | T19026 | punct | ),A3G |
R15452 | T19026 | T19027 | compound | A3G,promoter |
R15453 | T19027 | T19036 | nsubjpass | promoter,cloned |
R15454 | T19028 | T19031 | nummod | 5,constructs |
R15455 | T19029 | T19030 | compound | ′,deletion |
R15456 | T19030 | T19031 | compound | deletion,constructs |
R15457 | T19031 | T19036 | nsubjpass | constructs,cloned |
R15458 | T19032 | T19031 | prep | of,constructs |
R15459 | T19033 | T19034 | amod | different,sizes |
R15460 | T19034 | T19032 | pobj | sizes,of |
R15461 | T19035 | T19036 | auxpass | were,cloned |
R15462 | T19036 | T19036 | ROOT | cloned,cloned |
R15463 | T19037 | T19036 | prep | into,cloned |
R15464 | T19038 | T19040 | amod | pGL3-Basic,reporter |
R15465 | T19039 | T19040 | compound | luciferase,reporter |
R15466 | T19040 | T19041 | compound | reporter,plasmids |
R15467 | T19041 | T19037 | pobj | plasmids,into |
R15468 | T19042 | T19036 | punct | .,cloned |
R15469 | T19043 | T19044 | nsubj | Numbering,is |
R15470 | T19044 | T19044 | ROOT | is,is |
R15471 | T19045 | T19044 | acomp | relative,is |
R15472 | T19046 | T19045 | prep | to,relative |
R15473 | T19047 | T19049 | det | the,TSS |
R15474 | T19048 | T19049 | amod | major,TSS |
R15475 | T19049 | T19046 | pobj | TSS,to |
R15476 | T19050 | T19044 | punct | .,is |
R15477 | T19051 | T19055 | det | A,site |
R15478 | T19052 | T19055 | amod | putative,site |
R15479 | T19053 | T19055 | amod | Sp1/Sp3,site |
R15480 | T19054 | T19055 | compound | consensus,site |
R15481 | T19055 | T19061 | nsubjpass | site,depicted |
R15482 | T19056 | T19055 | punct | (,site |
R15483 | T19057 | T19058 | amod | gray,square |
R15484 | T19058 | T19055 | appos | square,site |
R15485 | T19059 | T19055 | punct | ),site |
R15486 | T19060 | T19061 | auxpass | is,depicted |
R15487 | T19061 | T19061 | ROOT | depicted,depicted |
R15488 | T19062 | T19061 | punct | .,depicted |
R15489 | T19063 | T19066 | punct | (,A3 |
R15490 | T19064 | T19066 | nmod | B,A3 |
R15491 | T19065 | T19066 | punct | ),A3 |
R15492 | T19066 | T19072 | nsubjpass | A3,transfected |
R15493 | T19067 | T19069 | nummod | .01,cells |
R15494 | T19068 | T19069 | compound | T,cells |
R15495 | T19069 | T19072 | nsubjpass | cells,transfected |
R15496 | T19070 | T19072 | auxpass | were,transfected |
R15497 | T19071 | T19072 | advmod | transiently,transfected |
R15498 | T19072 | T19072 | ROOT | transfected,transfected |
R15499 | T19073 | T19072 | prep | with,transfected |
R15500 | T19074 | T19077 | det | the,deletion |
R15501 | T19075 | T19076 | compound | A3G,promoter |
R15502 | T19076 | T19077 | compound | promoter,deletion |
R15503 | T19077 | T19078 | compound | deletion,constructs |
R15504 | T19078 | T19073 | pobj | constructs,with |
R15505 | T19079 | T19072 | punct | .,transfected |
R15506 | T19080 | T19084 | nsubj | Numbers,refer |
R15507 | T19081 | T19080 | prep | on,Numbers |
R15508 | T19082 | T19083 | det | the,x-axis |
R15509 | T19083 | T19081 | pobj | x-axis,on |
R15510 | T19084 | T19084 | ROOT | refer,refer |
R15511 | T19085 | T19084 | prep | to,refer |
R15512 | T19086 | T19087 | det | the,length |
R15513 | T19087 | T19085 | pobj | length,to |
R15514 | T19088 | T19087 | prep | of,length |
R15515 | T19089 | T19092 | det | the,fragments |
R15516 | T19090 | T19091 | compound | A3G,promoter |
R15517 | T19091 | T19092 | compound | promoter,fragments |
R15518 | T19092 | T19088 | pobj | fragments,of |
R15519 | T19093 | T19092 | prep | in,fragments |
R15520 | T19094 | T19093 | pobj | bp,in |
R15521 | T19095 | T19084 | punct | .,refer |
R15522 | T19096 | T19103 | punct | (,transfected |
R15523 | T19097 | T19101 | compound | C,plasmids |
R15524 | T19098 | T19099 | punct | ),A3G |
R15525 | T19099 | T19101 | compound | A3G,plasmids |
R15526 | T19100 | T19101 | compound | promoter,plasmids |
R15527 | T19101 | T19103 | nsubjpass | plasmids,transfected |
R15528 | T19102 | T19103 | auxpass | were,transfected |
R15529 | T19103 | T19103 | ROOT | transfected,transfected |
R15530 | T19104 | T19103 | prep | into,transfected |
R15531 | T19105 | T19111 | nmod | U937,lines |
R15532 | T19106 | T19105 | punct | ",",U937 |
R15533 | T19107 | T19105 | conj | HepG2,U937 |
R15534 | T19108 | T19107 | cc | and,HepG2 |
R15535 | T19109 | T19107 | conj | Huh7,HepG2 |
R15536 | T19110 | T19111 | compound | cell,lines |
R15537 | T19111 | T19104 | pobj | lines,into |
R15538 | T19112 | T19103 | punct | .,transfected |
R15539 | T19113 | T19117 | nsubj | Numbers,refer |
R15540 | T19114 | T19113 | prep | in,Numbers |
R15541 | T19115 | T19116 | det | the,legends |
R15542 | T19116 | T19114 | pobj | legends,in |
R15543 | T19117 | T19117 | ROOT | refer,refer |
R15544 | T19118 | T19117 | prep | to,refer |
R15545 | T19119 | T19120 | det | the,length |
R15546 | T19120 | T19118 | pobj | length,to |
R15547 | T19121 | T19120 | prep | of,length |
R15548 | T19122 | T19125 | det | the,fragments |
R15549 | T19123 | T19124 | compound | A3G,promoter |
R15550 | T19124 | T19125 | compound | promoter,fragments |
R15551 | T19125 | T19121 | pobj | fragments,of |
R15552 | T19126 | T19125 | prep | in,fragments |
R15553 | T19127 | T19126 | pobj | bp,in |
R15554 | T19128 | T19117 | punct | .,refer |
R15555 | T19129 | T19135 | prep | After,harvested |
R15556 | T19130 | T19131 | nummod | 48,h |
R15557 | T19131 | T19129 | pobj | h,After |
R15558 | T19132 | T19135 | punct | ",",harvested |
R15559 | T19133 | T19135 | nsubjpass | cells,harvested |
R15560 | T19134 | T19135 | auxpass | were,harvested |
R15561 | T19135 | T19135 | ROOT | harvested,harvested |
R15562 | T19136 | T19135 | prep | for,harvested |
R15563 | T19137 | T19138 | compound | luciferase,assay |
R15564 | T19138 | T19136 | pobj | assay,for |
R15565 | T19139 | T19135 | punct | .,harvested |
R15566 | T19140 | T19144 | advmod | Firefly,normalized |
R15567 | T19141 | T19142 | amod | luciferase,activities |
R15568 | T19142 | T19144 | nsubjpass | activities,normalized |
R15569 | T19143 | T19144 | auxpass | were,normalized |
R15570 | T19144 | T19144 | ROOT | normalized,normalized |
R15571 | T19145 | T19144 | prep | to,normalized |
R15572 | T19146 | T19149 | amod | coexpressed,activities |
R15573 | T19147 | T19149 | amod | renilla,activities |
R15574 | T19148 | T19149 | compound | luciferase,activities |
R15575 | T19149 | T19145 | pobj | activities,to |
R15576 | T19150 | T19144 | punct | .,normalized |
R15577 | T19151 | T19152 | amod | Mean,values |
R15578 | T19152 | T19165 | nsubjpass | values,shown |
R15579 | T19153 | T19155 | punct | (,SD |
R15580 | T19154 | T19155 | nummod | ±,SD |
R15581 | T19155 | T19152 | appos | SD,values |
R15582 | T19156 | T19155 | punct | ),SD |
R15583 | T19157 | T19155 | prep | of,SD |
R15584 | T19158 | T19160 | det | a,experiment |
R15585 | T19159 | T19160 | compound | representative,experiment |
R15586 | T19160 | T19157 | pobj | experiment,of |
R15587 | T19161 | T19160 | acl | performed,experiment |
R15588 | T19162 | T19161 | prep | in,performed |
R15589 | T19163 | T19162 | pobj | triplicate,in |
R15590 | T19164 | T19165 | auxpass | are,shown |
R15591 | T19165 | T19165 | ROOT | shown,shown |
R15592 | T19166 | T19165 | punct | .,shown |
sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T18831 | 10-200 | Sentence | denotes | Luciferase activities of A3G promoter constructs in different cell lines. (A) A3G promoter 5′ deletion constructs of different sizes were cloned into pGL3-Basic luciferase reporter plasmids. |
T18832 | 201-240 | Sentence | denotes | Numbering is relative to the major TSS. |
T18833 | 241-391 | Sentence | denotes | A putative Sp1/Sp3 consensus site (gray square) is depicted. (B) A3.01 T cells were transiently transfected with the A3G promoter deletion constructs. |
T18834 | 392-551 | Sentence | denotes | Numbers on the x-axis refer to the length of the A3G promoter fragments in bp. (C) A3G promoter plasmids were transfected into U937, HepG2 and Huh7 cell lines. |
T18835 | 552-686 | Sentence | denotes | Numbers in the legends refer to the length of the A3G promoter fragments in bp. After 48 h, cells were harvested for luciferase assay. |
T18836 | 687-778 | Sentence | denotes | Firefly luciferase activities were normalized to coexpressed renilla luciferase activities. |
T18837 | 779-862 | Sentence | denotes | Mean values (±SD) of a representative experiment performed in triplicate are shown. |
T160 | 0-9 | Sentence | denotes | Figure 3. |
T161 | 10-200 | Sentence | denotes | Luciferase activities of A3G promoter constructs in different cell lines. (A) A3G promoter 5′ deletion constructs of different sizes were cloned into pGL3-Basic luciferase reporter plasmids. |
T162 | 201-240 | Sentence | denotes | Numbering is relative to the major TSS. |
T163 | 241-391 | Sentence | denotes | A putative Sp1/Sp3 consensus site (gray square) is depicted. (B) A3.01 T cells were transiently transfected with the A3G promoter deletion constructs. |
T164 | 392-551 | Sentence | denotes | Numbers on the x-axis refer to the length of the A3G promoter fragments in bp. (C) A3G promoter plasmids were transfected into U937, HepG2 and Huh7 cell lines. |
T165 | 552-686 | Sentence | denotes | Numbers in the legends refer to the length of the A3G promoter fragments in bp. After 48 h, cells were harvested for luciferase assay. |
T166 | 687-778 | Sentence | denotes | Firefly luciferase activities were normalized to coexpressed renilla luciferase activities. |
T167 | 779-862 | Sentence | denotes | Mean values (±SD) of a representative experiment performed in triplicate are shown. |
pmc-enju-pas
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T18853 | 10-20 | NN | denotes | Luciferase |
T18854 | 21-31 | NN | denotes | activities |
T18855 | 32-34 | IN | denotes | of |
T18856 | 35-38 | NN | denotes | A3G |
T18857 | 39-47 | NN | denotes | promoter |
T18858 | 48-58 | NN | denotes | constructs |
T18859 | 59-61 | IN | denotes | in |
T18860 | 62-71 | JJ | denotes | different |
T18861 | 72-76 | NN | denotes | cell |
T18862 | 77-83 | NN | denotes | lines. |
T18863 | 84-85 | -LRB- | denotes | ( |
T18864 | 85-86 | NN | denotes | A |
T18865 | 86-87 | -RRB- | denotes | ) |
T18866 | 88-91 | NN | denotes | A3G |
T18867 | 92-100 | NN | denotes | promoter |
T18868 | 101-103 | NN | denotes | 5′ |
T18869 | 104-112 | NN | denotes | deletion |
T18870 | 113-123 | NN | denotes | constructs |
T18871 | 124-126 | IN | denotes | of |
T18872 | 127-136 | JJ | denotes | different |
T18873 | 137-142 | NN | denotes | sizes |
T18874 | 143-147 | VB | denotes | were |
T18875 | 148-154 | VB | denotes | cloned |
T18876 | 155-159 | IN | denotes | into |
T18877 | 160-170 | JJ | denotes | pGL3-Basic |
T18878 | 171-181 | NN | denotes | luciferase |
T18879 | 182-190 | NN | denotes | reporter |
T18880 | 191-199 | NN | denotes | plasmids |
T18881 | 201-210 | NN | denotes | Numbering |
T18882 | 211-213 | VB | denotes | is |
T18883 | 214-222 | JJ | denotes | relative |
T18884 | 223-225 | TO | denotes | to |
T18885 | 226-229 | DT | denotes | the |
T18886 | 230-235 | JJ | denotes | major |
T18887 | 236-239 | NN | denotes | TSS |
T18888 | 241-242 | DT | denotes | A |
T18889 | 243-251 | JJ | denotes | putative |
T18890 | 252-259 | NN | denotes | Sp1/Sp3 |
T18891 | 260-269 | NN | denotes | consensus |
T18892 | 270-274 | NN | denotes | site |
T18893 | 275-276 | -LRB- | denotes | ( |
T18894 | 276-280 | JJ | denotes | gray |
T18895 | 281-287 | NN | denotes | square |
T18896 | 287-288 | -RRB- | denotes | ) |
T18897 | 289-291 | VB | denotes | is |
T18898 | 292-301 | VB | denotes | depicted. |
T18899 | 302-303 | -LRB- | denotes | ( |
T18900 | 303-304 | NN | denotes | B |
T18901 | 304-305 | -RRB- | denotes | ) |
T18902 | 306-313 | NN | denotes | A3.01 T |
T18903 | 314-319 | NN | denotes | cells |
T18904 | 320-324 | VB | denotes | were |
T18905 | 325-336 | RB | denotes | transiently |
T18906 | 337-348 | VB | denotes | transfected |
T18907 | 349-353 | IN | denotes | with |
T18908 | 354-357 | DT | denotes | the |
T18909 | 358-361 | NN | denotes | A3G |
T18910 | 362-370 | NN | denotes | promoter |
T18911 | 371-379 | NN | denotes | deletion |
T18912 | 380-390 | NN | denotes | constructs |
T18913 | 392-399 | NN | denotes | Numbers |
T18914 | 400-402 | IN | denotes | on |
T18915 | 403-406 | DT | denotes | the |
T18916 | 407-413 | NN | denotes | x-axis |
T18917 | 414-419 | VB | denotes | refer |
T18918 | 420-422 | TO | denotes | to |
T18919 | 423-426 | DT | denotes | the |
T18920 | 427-433 | NN | denotes | length |
T18921 | 434-436 | IN | denotes | of |
T18922 | 437-440 | DT | denotes | the |
T18923 | 441-444 | NN | denotes | A3G |
T18924 | 445-453 | NN | denotes | promoter |
T18925 | 454-463 | NN | denotes | fragments |
T18926 | 464-466 | IN | denotes | in |
T18927 | 467-470 | NN | denotes | bp. |
T18928 | 471-472 | -LRB- | denotes | ( |
T18929 | 472-473 | NN | denotes | C |
T18930 | 473-474 | -RRB- | denotes | ) |
T18931 | 475-478 | NN | denotes | A3G |
T18932 | 479-487 | NN | denotes | promoter |
T18933 | 488-496 | NN | denotes | plasmids |
T18934 | 497-501 | VB | denotes | were |
T18935 | 502-513 | VB | denotes | transfected |
T18936 | 514-518 | IN | denotes | into |
T18937 | 519-523 | NN | denotes | U937 |
T18938 | 523-524 | -COMMA- | denotes | , |
T18939 | 525-530 | NN | denotes | HepG2 |
T18940 | 531-534 | CC | denotes | and |
T18941 | 535-539 | NN | denotes | Huh7 |
T18942 | 540-544 | NN | denotes | cell |
T18943 | 545-550 | NN | denotes | lines |
T18944 | 552-559 | NN | denotes | Numbers |
T18945 | 560-562 | IN | denotes | in |
T18946 | 563-566 | DT | denotes | the |
T18947 | 567-574 | NN | denotes | legends |
T18948 | 575-580 | VB | denotes | refer |
T18949 | 581-583 | TO | denotes | to |
T18950 | 584-587 | DT | denotes | the |
T18951 | 588-594 | NN | denotes | length |
T18952 | 595-597 | IN | denotes | of |
T18953 | 598-601 | DT | denotes | the |
T18954 | 602-605 | NN | denotes | A3G |
T18955 | 606-614 | NN | denotes | promoter |
T18956 | 615-624 | NN | denotes | fragments |
T18957 | 625-627 | IN | denotes | in |
T18958 | 628-637 | NN | denotes | bp. After |
T18959 | 638-642 | NN | denotes | 48 h |
T18960 | 642-643 | -COMMA- | denotes | , |
T18961 | 644-649 | NN | denotes | cells |
T18962 | 650-654 | VB | denotes | were |
T18963 | 655-664 | VB | denotes | harvested |
T18964 | 665-668 | IN | denotes | for |
T18965 | 669-679 | NN | denotes | luciferase |
T18966 | 680-685 | NN | denotes | assay |
T18967 | 687-694 | JJ | denotes | Firefly |
T18968 | 695-705 | NN | denotes | luciferase |
T18969 | 706-716 | NN | denotes | activities |
T18970 | 717-721 | VB | denotes | were |
T18971 | 722-732 | VB | denotes | normalized |
T18972 | 733-735 | TO | denotes | to |
T18973 | 736-747 | VB | denotes | coexpressed |
T18974 | 748-755 | NN | denotes | renilla |
T18975 | 756-766 | NN | denotes | luciferase |
T18976 | 767-777 | NN | denotes | activities |
T18977 | 779-783 | NN | denotes | Mean |
T18978 | 784-790 | NN | denotes | values |
T18979 | 791-792 | -LRB- | denotes | ( |
T18980 | 792-795 | NN | denotes | ±SD |
T18981 | 795-796 | -RRB- | denotes | ) |
T18982 | 797-799 | IN | denotes | of |
T18983 | 800-801 | DT | denotes | a |
T18984 | 802-816 | JJ | denotes | representative |
T18985 | 817-827 | NN | denotes | experiment |
T18986 | 828-837 | VB | denotes | performed |
T18987 | 838-840 | IN | denotes | in |
T18988 | 841-851 | NN | denotes | triplicate |
T18989 | 852-855 | VB | denotes | are |
T18990 | 856-861 | VB | denotes | shown |
R15299 | T18854 | T18853 | arg1Of | activities,Luciferase |
R15300 | T18854 | T18855 | arg1Of | activities,of |
R15301 | T18854 | T18874 | arg1Of | activities,were |
R15302 | T18854 | T18875 | arg2Of | activities,cloned |
R15303 | T18858 | T18855 | arg2Of | constructs,of |
R15304 | T18858 | T18856 | arg1Of | constructs,A3G |
R15305 | T18858 | T18857 | arg1Of | constructs,promoter |
R15306 | T18858 | T18859 | arg1Of | constructs,in |
R15307 | T18862 | T18860 | arg1Of | lines.,different |
R15308 | T18862 | T18861 | arg1Of | lines.,cell |
R15309 | T18862 | T18863 | arg1Of | lines.,( |
R15310 | T18864 | T18863 | arg2Of | A,( |
R15311 | T18865 | T18863 | arg3Of | ),( |
R15312 | T18870 | T18859 | arg2Of | constructs,in |
R15313 | T18870 | T18862 | arg1Of | constructs,lines. |
R15314 | T18870 | T18866 | arg1Of | constructs,A3G |
R15315 | T18870 | T18867 | arg1Of | constructs,promoter |
R15316 | T18870 | T18868 | arg1Of | constructs,5′ |
R15317 | T18870 | T18869 | arg1Of | constructs,deletion |
R15318 | T18870 | T18871 | arg1Of | constructs,of |
R15319 | T18873 | T18871 | arg2Of | sizes,of |
R15320 | T18873 | T18872 | arg1Of | sizes,different |
R15321 | T18875 | T18874 | arg2Of | cloned,were |
R15322 | T18875 | T18876 | arg1Of | cloned,into |
R15323 | T18880 | T18876 | arg2Of | plasmids,into |
R15324 | T18880 | T18877 | arg1Of | plasmids,pGL3-Basic |
R15325 | T18880 | T18878 | arg1Of | plasmids,luciferase |
R15326 | T18880 | T18879 | arg1Of | plasmids,reporter |
R15327 | T18881 | T18882 | arg1Of | Numbering,is |
R15328 | T18881 | T18883 | arg1Of | Numbering,relative |
R15329 | T18883 | T18882 | arg2Of | relative,is |
R15330 | T18883 | T18884 | arg1Of | relative,to |
R15331 | T18887 | T18884 | arg2Of | TSS,to |
R15332 | T18887 | T18885 | arg1Of | TSS,the |
R15333 | T18887 | T18886 | arg1Of | TSS,major |
R15334 | T18892 | T18888 | arg1Of | site,A |
R15335 | T18892 | T18889 | arg1Of | site,putative |
R15336 | T18892 | T18890 | arg1Of | site,Sp1/Sp3 |
R15337 | T18892 | T18891 | arg1Of | site,consensus |
R15338 | T18892 | T18893 | arg1Of | site,( |
R15339 | T18892 | T18897 | arg1Of | site,is |
R15340 | T18892 | T18898 | arg2Of | site,depicted. |
R15341 | T18895 | T18893 | arg2Of | square,( |
R15342 | T18895 | T18894 | arg1Of | square,gray |
R15343 | T18896 | T18893 | arg3Of | ),( |
R15344 | T18898 | T18897 | arg2Of | depicted.,is |
R15345 | T18900 | T18899 | arg2Of | B,( |
R15346 | T18901 | T18899 | arg3Of | ),( |
R15347 | T18903 | T18899 | arg1Of | cells,( |
R15348 | T18903 | T18902 | arg1Of | cells,A3.01 T |
R15349 | T18903 | T18904 | arg1Of | cells,were |
R15350 | T18903 | T18906 | arg2Of | cells,transfected |
R15351 | T18906 | T18897 | modOf | transfected,is |
R15352 | T18906 | T18904 | arg2Of | transfected,were |
R15353 | T18906 | T18905 | arg1Of | transfected,transiently |
R15354 | T18906 | T18907 | arg1Of | transfected,with |
R15355 | T18912 | T18907 | arg2Of | constructs,with |
R15356 | T18912 | T18908 | arg1Of | constructs,the |
R15357 | T18912 | T18909 | arg1Of | constructs,A3G |
R15358 | T18912 | T18910 | arg1Of | constructs,promoter |
R15359 | T18912 | T18911 | arg1Of | constructs,deletion |
R15360 | T18913 | T18914 | arg1Of | Numbers,on |
R15361 | T18913 | T18917 | arg1Of | Numbers,refer |
R15362 | T18916 | T18914 | arg2Of | x-axis,on |
R15363 | T18916 | T18915 | arg1Of | x-axis,the |
R15364 | T18917 | T18918 | arg1Of | refer,to |
R15365 | T18920 | T18918 | arg2Of | length,to |
R15366 | T18920 | T18919 | arg1Of | length,the |
R15367 | T18920 | T18921 | arg1Of | length,of |
R15368 | T18920 | T18926 | arg1Of | length,in |
R15369 | T18925 | T18921 | arg2Of | fragments,of |
R15370 | T18925 | T18922 | arg1Of | fragments,the |
R15371 | T18925 | T18923 | arg1Of | fragments,A3G |
R15372 | T18925 | T18924 | arg1Of | fragments,promoter |
R15373 | T18927 | T18926 | arg2Of | bp.,in |
R15374 | T18927 | T18934 | modOf | bp.,were |
R15375 | T18929 | T18928 | arg2Of | C,( |
R15376 | T18930 | T18928 | arg3Of | ),( |
R15377 | T18933 | T18928 | arg1Of | plasmids,( |
R15378 | T18933 | T18931 | arg1Of | plasmids,A3G |
R15379 | T18933 | T18932 | arg1Of | plasmids,promoter |
R15380 | T18933 | T18934 | arg1Of | plasmids,were |
R15381 | T18933 | T18935 | arg2Of | plasmids,transfected |
R15382 | T18935 | T18934 | arg2Of | transfected,were |
R15383 | T18935 | T18936 | arg1Of | transfected,into |
R15384 | T18937 | T18938 | arg1Of | U937,"," |
R15385 | T18938 | T18940 | arg1Of | ",",and |
R15386 | T18939 | T18938 | arg2Of | HepG2,"," |
R15387 | T18940 | T18936 | arg2Of | and,into |
R15388 | T18943 | T18940 | arg2Of | lines,and |
R15389 | T18943 | T18941 | arg1Of | lines,Huh7 |
R15390 | T18943 | T18942 | arg1Of | lines,cell |
R15391 | T18944 | T18945 | arg1Of | Numbers,in |
R15392 | T18944 | T18948 | arg1Of | Numbers,refer |
R15393 | T18947 | T18945 | arg2Of | legends,in |
R15394 | T18947 | T18946 | arg1Of | legends,the |
R15395 | T18948 | T18949 | arg1Of | refer,to |
R15396 | T18948 | T18960 | arg1Of | refer,"," |
R15397 | T18951 | T18949 | arg2Of | length,to |
R15398 | T18951 | T18950 | arg1Of | length,the |
R15399 | T18951 | T18952 | arg1Of | length,of |
R15400 | T18956 | T18952 | arg2Of | fragments,of |
R15401 | T18956 | T18953 | arg1Of | fragments,the |
R15402 | T18956 | T18954 | arg1Of | fragments,A3G |
R15403 | T18956 | T18955 | arg1Of | fragments,promoter |
R15404 | T18956 | T18957 | arg1Of | fragments,in |
R15405 | T18959 | T18957 | arg2Of | 48 h,in |
R15406 | T18959 | T18958 | arg1Of | 48 h,bp. After |
R15407 | T18961 | T18962 | arg1Of | cells,were |
R15408 | T18961 | T18963 | arg2Of | cells,harvested |
R15409 | T18963 | T18960 | arg2Of | harvested,"," |
R15410 | T18963 | T18962 | arg2Of | harvested,were |
R15411 | T18963 | T18964 | arg1Of | harvested,for |
R15412 | T18966 | T18964 | arg2Of | assay,for |
R15413 | T18966 | T18965 | arg1Of | assay,luciferase |
R15414 | T18969 | T18967 | arg1Of | activities,Firefly |
R15415 | T18969 | T18968 | arg1Of | activities,luciferase |
R15416 | T18969 | T18970 | arg1Of | activities,were |
R15417 | T18969 | T18971 | arg2Of | activities,normalized |
R15418 | T18971 | T18970 | arg2Of | normalized,were |
R15419 | T18971 | T18972 | arg1Of | normalized,to |
R15420 | T18976 | T18972 | arg2Of | activities,to |
R15421 | T18976 | T18973 | arg2Of | activities,coexpressed |
R15422 | T18976 | T18974 | arg1Of | activities,renilla |
R15423 | T18976 | T18975 | arg1Of | activities,luciferase |
R15424 | T18978 | T18977 | arg1Of | values,Mean |
R15425 | T18978 | T18979 | arg1Of | values,( |
R15426 | T18978 | T18982 | arg1Of | values,of |
R15427 | T18978 | T18989 | arg1Of | values,are |
R15428 | T18978 | T18990 | arg2Of | values,shown |
R15429 | T18980 | T18979 | arg2Of | ±SD,( |
R15430 | T18981 | T18979 | arg3Of | ),( |
R15431 | T18985 | T18982 | arg2Of | experiment,of |
R15432 | T18985 | T18983 | arg1Of | experiment,a |
R15433 | T18985 | T18984 | arg1Of | experiment,representative |
R15434 | T18985 | T18986 | arg2Of | experiment,performed |
R15435 | T18986 | T18987 | arg1Of | performed,in |
R15436 | T18988 | T18987 | arg2Of | triplicate,in |
R15437 | T18990 | T18989 | arg2Of | shown,are |
events-check-again
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T19256 | 10-20 | Protein | denotes | Luciferase |
T19257 | 21-31 | Positive_regulation | denotes | activities |
T19258 | 35-38 | Protein | denotes | A3G |
T19259 | 39-47 | Entity | denotes | promoter |
T19260 | 88-91 | Protein | denotes | A3G |
T19261 | 171-181 | Protein | denotes | luciferase |
T19262 | 358-361 | Protein | denotes | A3G |
T19263 | 441-444 | Protein | denotes | A3G |
T19264 | 475-478 | Protein | denotes | A3G |
T19265 | 602-605 | Protein | denotes | A3G |
T19266 | 669-679 | Protein | denotes | luciferase |
T19267 | 695-705 | Protein | denotes | luciferase |
T19268 | 736-747 | Gene_expression | denotes | coexpressed |
T19269 | 736-747 | Gene_expression | denotes | coexpressed |
T19270 | 756-766 | Protein | denotes | luciferase |
R15614 | T19256 | T19257 | themeOf | Luciferase,activities |
R15615 | T19259 | T19257 | causeOf | promoter,activities |
R15616 | T19259 | T19258 | partOf | promoter,A3G |
R15617 | T19267 | T19268 | themeOf | luciferase,coexpressed |
R15618 | T19270 | T19269 | themeOf | luciferase,coexpressed |
bionlp-st-ge-2016-reference-tees
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T19271 | 10-20 | Protein | denotes | Luciferase |
T19272 | 35-47 | Protein | denotes | A3G promoter |
T19273 | 160-164 | Protein | denotes | pGL3 |
T19274 | 165-181 | Protein | denotes | Basic luciferase |
T19275 | 252-255 | Protein | denotes | Sp1 |
T19276 | 256-259 | Protein | denotes | Sp3 |
T19277 | 358-390 | Protein | denotes | A3G promoter deletion constructs |
T19278 | 519-523 | Protein | denotes | U937 |
T19279 | 525-530 | Protein | denotes | HepG2 |
T19280 | 535-550 | Protein | denotes | Huh7 cell lines |
T19281 | 669-679 | Protein | denotes | luciferase |
T19282 | 687-705 | Protein | denotes | Firefly luciferase |
T19283 | 748-766 | Protein | denotes | renilla luciferase |
T19284 | 736-747 | Gene_expression | denotes | coexpressed |
T19285 | 736-747 | Gene_expression | denotes | coexpressed |
R15619 | T19282 | T19284 | themeOf | Firefly luciferase,coexpressed |
R15620 | T19283 | T19285 | themeOf | renilla luciferase,coexpressed |
bionlp-st-ge-2016-reference
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T18816 | 10-20 | Protein | denotes | Luciferase |
T18817 | 21-31 | Positive_regulation | denotes | activities |
T18818 | 35-38 | Protein | denotes | A3G |
T18819 | 39-47 | Entity | denotes | promoter |
T18820 | 88-91 | Protein | denotes | A3G |
T18821 | 171-181 | Protein | denotes | luciferase |
T18822 | 358-361 | Protein | denotes | A3G |
T18823 | 441-444 | Protein | denotes | A3G |
T18824 | 475-478 | Protein | denotes | A3G |
T18825 | 602-605 | Protein | denotes | A3G |
T18826 | 669-679 | Protein | denotes | luciferase |
T18827 | 695-705 | Protein | denotes | luciferase |
T18828 | 736-747 | Gene_expression | denotes | coexpressed |
T18829 | 736-747 | Gene_expression | denotes | coexpressed |
T18830 | 756-766 | Protein | denotes | luciferase |
R15294 | T18816 | T18817 | themeOf | Luciferase,activities |
R15295 | T18819 | T18817 | causeOf | promoter,activities |
R15296 | T18819 | T18818 | partOf | promoter,A3G |
R15297 | T18827 | T18828 | themeOf | luciferase,coexpressed |
R15298 | T18830 | T18829 | themeOf | luciferase,coexpressed |
bionlp-st-ge-2016-uniprot
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T18991 | 10-20 | P08659 | denotes | Luciferase |
T18992 | 35-38 | Q9HC16 | denotes | A3G |
T18993 | 88-91 | Q9HC16 | denotes | A3G |
T18994 | 171-181 | P08659 | denotes | luciferase |
T18995 | 214-222 | Q04864 | denotes | relative |
T18996 | 252-255 | P08047 | denotes | Sp1 |
T18997 | 256-259 | Q02447 | denotes | Sp3 |
T18998 | 358-361 | Q9HC16 | denotes | A3G |
T18999 | 441-444 | Q9HC16 | denotes | A3G |
T19000 | 475-478 | Q9HC16 | denotes | A3G |
T19001 | 602-605 | Q9HC16 | denotes | A3G |
T19002 | 669-679 | P08659 | denotes | luciferase |
T19003 | 695-705 | P08659 | denotes | luciferase |
T19004 | 756-766 | P08659 | denotes | luciferase |