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PMC:1920263 / 21000-21236 JSONTXT

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bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T8325 0-9 RB denotes Similarly
T8326 9-10 , denotes ,
T8327 11-26 NN denotes pGL3-APOprom502
T8328 27-28 -LRB- denotes (
T8329 28-38 VBG denotes containing
T8330 39-47 NN denotes sequence
T8331 48-49 NN denotes −
T8332 49-52 CD denotes 436
T8333 52-53 NN denotes /
T8334 53-56 CD denotes +66
T8335 56-57 -RRB- denotes )
T8336 57-58 , denotes ,
T8337 59-74 NN denotes pGL3-APOprom225
T8338 75-76 -LRB- denotes (
T8339 76-86 VBG denotes containing
T8340 87-95 NN denotes sequence
T8341 96-97 NN denotes −
T8342 97-100 CD denotes 159
T8343 100-101 NN denotes /
T8344 101-104 CD denotes +66
T8345 104-105 -RRB- denotes )
T8346 106-109 CC denotes and
T8347 110-117 JJ denotes further
T8348 118-119 CD denotes 5
T8349 119-120 NN denotes ′
T8350 121-129 NN denotes deletion
T8351 130-138 NN denotes reporter
T8352 139-149 VBZ denotes constructs
T8353 150-160 VBG denotes containing
T8354 161-164 CD denotes 180
T8355 164-165 , denotes ,
T8356 166-169 CD denotes 150
T8357 169-170 , denotes ,
T8358 171-174 CD denotes 120
T8359 175-177 CC denotes or
T8360 178-180 CD denotes 60
T8361 181-183 NN denotes bp
T8362 184-192 RB denotes upstream
T8363 193-195 IN denotes of
T8364 196-204 NN denotes position
T8365 205-208 CD denotes +65
T8366 209-213 VBD denotes were
T8367 214-223 VBN denotes generated
T8368 224-225 -LRB- denotes (
T8369 225-231 NN denotes Figure
T8370 232-234 NN denotes 3A
T8371 234-235 -RRB- denotes )
T8372 235-236 . denotes .
R6876 T8333 T8352 dep /,constructs
R6877 T8334 T8333 nummod +66,/
R6878 T8335 T8333 punct ),/
R6879 T8336 T8333 punct ",",/
R6880 T8337 T8333 dep pGL3-APOprom225,/
R6881 T8338 T8339 punct (,containing
R6882 T8339 T8337 acl containing,pGL3-APOprom225
R6883 T8340 T8341 compound sequence,−
R6884 T8341 T8339 dobj −,containing
R6885 T8342 T8343 nummod 159,/
R6886 T8343 T8341 appos /,−
R6887 T8344 T8343 nummod +66,/
R6888 T8345 T8341 punct ),−
R6889 T8346 T8333 cc and,/
R6890 T8347 T8351 amod further,reporter
R6891 T8348 T8349 nummod 5,′
R6892 T8349 T8351 compound ′,reporter
R6893 T8350 T8351 compound deletion,reporter
R6894 T8351 T8352 compound reporter,constructs
R6895 T8352 T8352 ROOT constructs,constructs
R6896 T8353 T8352 advcl containing,constructs
R6897 T8354 T8353 dobj 180,containing
R6898 T8355 T8354 punct ",",180
R6899 T8356 T8354 conj 150,180
R6900 T8357 T8362 punct ",",upstream
R6901 T8358 T8362 nummod 120,upstream
R6902 T8359 T8358 cc or,120
R6903 T8360 T8358 conj 60,120
R6904 T8361 T8362 compound bp,upstream
R6905 T8362 T8353 prep upstream,containing
R6906 T8363 T8362 prep of,upstream
R6907 T8364 T8363 pobj position,of
R6908 T8365 T8364 nummod +65,position
R6909 T8366 T8367 auxpass were,generated
R6910 T8367 T8352 ccomp generated,constructs
R6911 T8368 T8370 punct (,3A
R6912 T8369 T8370 compound Figure,3A
R6913 T8370 T8367 parataxis 3A,generated
R6914 T8371 T8352 punct ),constructs
R6915 T8372 T8352 punct .,constructs
R6868 T8325 T8352 advmod Similarly,constructs
R6869 T8326 T8352 punct ",",constructs
R6870 T8327 T8352 amod pGL3-APOprom502,constructs
R6871 T8328 T8352 punct (,constructs
R6872 T8329 T8352 amod containing,constructs
R6873 T8330 T8331 compound sequence,−
R6874 T8331 T8333 dep −,/
R6875 T8332 T8331 nummod 436,−

sentences

Id Subject Object Predicate Lexical cue
T7973 0-236 Sentence denotes Similarly, pGL3-APOprom502 (containing sequence −436/+66), pGL3-APOprom225 (containing sequence −159/+66) and further 5′ deletion reporter constructs containing 180, 150, 120 or 60 bp upstream of position +65 were generated (Figure 3A).
T153 0-236 Sentence denotes Similarly, pGL3-APOprom502 (containing sequence −436/+66), pGL3-APOprom225 (containing sequence −159/+66) and further 5′ deletion reporter constructs containing 180, 150, 120 or 60 bp upstream of position +65 were generated (Figure 3A).

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T8041 0-9 RB denotes Similarly
T8042 9-10 -COMMA- denotes ,
T8043 11-26 NN denotes pGL3-APOprom502
T8044 27-28 -LRB- denotes (
T8045 28-38 VB denotes containing
T8046 39-47 NN denotes sequence
T8047 48-56 CD denotes −436/+66
T8048 56-57 -RRB- denotes )
T8049 57-58 -COMMA- denotes ,
T8050 59-74 NN denotes pGL3-APOprom225
T8051 75-76 -LRB- denotes (
T8052 76-86 VB denotes containing
T8053 87-95 NN denotes sequence
T8054 96-104 CD denotes −159/+66
T8055 104-105 -RRB- denotes )
T8056 106-109 CC denotes and
T8057 110-117 RB denotes further
T8058 118-120 CD denotes 5′
T8059 121-129 NN denotes deletion
T8060 130-138 NN denotes reporter
T8061 139-149 NN denotes constructs
T8062 150-160 VB denotes containing
T8063 161-164 CD denotes 180
T8064 164-165 -COMMA- denotes ,
T8065 166-169 CD denotes 150
T8066 169-170 -COMMA- denotes ,
T8067 171-174 CD denotes 120
T8068 175-177 CC denotes or
T8069 178-183 NN denotes 60 bp
T8070 184-192 RB denotes upstream
T8071 193-195 IN denotes of
T8072 196-204 NN denotes position
T8073 205-208 CD denotes +65
T8074 209-213 VB denotes were
T8075 214-223 VB denotes generated
T8076 224-225 -LRB- denotes (
T8077 225-231 NN denotes Figure
T8078 232-234 NN denotes 3A
T8079 234-235 -RRB- denotes )
R6603 T8043 T8044 arg1Of pGL3-APOprom502,(
R6604 T8043 T8049 arg1Of pGL3-APOprom502,","
R6605 T8045 T8044 arg2Of containing,(
R6606 T8046 T8045 arg2Of sequence,containing
R6607 T8046 T8047 arg1Of sequence,−436/+66
R6608 T8048 T8044 arg3Of ),(
R6609 T8049 T8056 arg1Of ",",and
R6610 T8050 T8049 arg2Of pGL3-APOprom225,","
R6611 T8050 T8051 arg1Of pGL3-APOprom225,(
R6612 T8052 T8051 arg2Of containing,(
R6613 T8053 T8052 arg2Of sequence,containing
R6614 T8053 T8054 arg1Of sequence,−159/+66
R6615 T8055 T8051 arg3Of ),(
R6616 T8056 T8074 arg1Of and,were
R6617 T8056 T8075 arg2Of and,generated
R6618 T8061 T8056 arg2Of constructs,and
R6619 T8061 T8057 arg1Of constructs,further
R6620 T8061 T8058 arg1Of constructs,5′
R6621 T8061 T8059 arg1Of constructs,deletion
R6622 T8061 T8060 arg1Of constructs,reporter
R6623 T8061 T8062 arg1Of constructs,containing
R6624 T8063 T8064 arg1Of 180,","
R6625 T8064 T8062 arg2Of ",",containing
R6626 T8064 T8066 arg1Of ",",","
R6627 T8065 T8064 arg2Of 150,","
R6628 T8067 T8068 arg1Of 120,or
R6629 T8068 T8066 arg2Of or,","
R6630 T8068 T8070 arg1Of or,upstream
R6631 T8069 T8068 arg2Of 60 bp,or
R6632 T8070 T8071 arg1Of upstream,of
R6633 T8072 T8071 arg2Of position,of
R6634 T8072 T8073 arg1Of position,+65
R6635 T8075 T8041 arg1Of generated,Similarly
R6636 T8075 T8042 arg1Of generated,","
R6637 T8075 T8074 arg2Of generated,were
R6638 T8075 T8076 arg1Of generated,(
R6639 T8078 T8076 arg2Of 3A,(
R6640 T8078 T8077 arg1Of 3A,Figure
R6641 T8079 T8076 arg3Of ),(

bionlp-st-ge-2016-reference-tees

Id Subject Object Predicate Lexical cue
T8651 11-15 Protein denotes pGL3
T8652 16-26 Protein denotes APOprom502
T8653 59-74 Protein denotes pGL3-APOprom225