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PMC:1920263 / 20748-20999 JSONTXT

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test2

Id Subject Object Predicate Lexical cue Negation
T7950 28-31 Protein denotes A3G
T7951 173-183 Protein denotes luciferase true

GO-BP

Id Subject Object Predicate Lexical cue
T7980 120-133 http://purl.obolibrary.org/obo/GO_0006351 denotes transcription

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T8287 0-3 IN denotes For
T8288 4-20 NN denotes characterization
T8289 21-23 IN denotes of
T8290 24-27 DT denotes the
T8291 28-31 NNP denotes A3G
T8292 32-40 NN denotes promoter
T8293 40-41 , denotes ,
T8294 42-44 PRP denotes we
T8295 45-51 VBD denotes cloned
T8296 52-55 DT denotes the
T8297 56-60 CD denotes 1025
T8298 61-63 NN denotes bp
T8299 64-71 VBN denotes located
T8300 72-74 IN denotes at
T8301 75-83 NN denotes position
T8302 84-85 CD denotes −
T8303 85-88 CD denotes 959
T8304 88-89 NN denotes /
T8305 89-92 CD denotes +66
T8306 93-101 JJ denotes relative
T8307 102-104 TO denotes to
T8308 105-108 DT denotes the
T8309 109-119 VBN denotes identified
T8310 120-133 NN denotes transcription
T8311 134-139 NN denotes start
T8312 140-144 IN denotes into
T8313 145-148 DT denotes the
T8314 149-161 JJ denotes promoterless
T8315 162-172 JJ denotes pGL3-Basic
T8316 173-183 NN denotes luciferase
T8317 184-192 NN denotes reporter
T8318 193-200 NN denotes plasmid
T8319 201-204 CC denotes and
T8320 205-215 VBN denotes designated
T8321 216-219 DT denotes the
T8322 220-227 JJ denotes plasmid
T8323 228-250 NN denotes pGL3-Basic-APOprom1025
T8324 250-251 . denotes .
R6830 T8287 T8295 prep For,cloned
R6831 T8288 T8287 pobj characterization,For
R6832 T8289 T8288 prep of,characterization
R6833 T8290 T8292 det the,promoter
R6834 T8291 T8292 compound A3G,promoter
R6835 T8292 T8289 pobj promoter,of
R6836 T8293 T8295 punct ",",cloned
R6837 T8294 T8295 nsubj we,cloned
R6838 T8295 T8295 ROOT cloned,cloned
R6839 T8296 T8298 det the,bp
R6840 T8297 T8298 nummod 1025,bp
R6841 T8298 T8295 dobj bp,cloned
R6842 T8299 T8298 acl located,bp
R6843 T8300 T8299 prep at,located
R6844 T8301 T8300 pobj position,at
R6845 T8302 T8301 nummod −,position
R6846 T8303 T8304 nummod 959,/
R6847 T8304 T8301 appos /,position
R6848 T8305 T8306 nummod +66,relative
R6849 T8306 T8304 amod relative,/
R6850 T8307 T8306 prep to,relative
R6851 T8308 T8311 det the,start
R6852 T8309 T8311 amod identified,start
R6853 T8310 T8311 compound transcription,start
R6854 T8311 T8307 pobj start,to
R6855 T8312 T8311 prep into,start
R6856 T8313 T8318 det the,plasmid
R6857 T8314 T8318 amod promoterless,plasmid
R6858 T8315 T8318 amod pGL3-Basic,plasmid
R6859 T8316 T8318 compound luciferase,plasmid
R6860 T8317 T8318 compound reporter,plasmid
R6861 T8318 T8312 pobj plasmid,into
R6862 T8319 T8306 cc and,relative
R6863 T8320 T8306 conj designated,relative
R6864 T8321 T8323 det the,pGL3-Basic-APOprom1025
R6865 T8322 T8323 amod plasmid,pGL3-Basic-APOprom1025
R6866 T8323 T8306 appos pGL3-Basic-APOprom1025,relative
R6867 T8324 T8295 punct .,cloned

sentences

Id Subject Object Predicate Lexical cue
T7972 0-251 Sentence denotes For characterization of the A3G promoter, we cloned the 1025 bp located at position −959/+66 relative to the identified transcription start into the promoterless pGL3-Basic luciferase reporter plasmid and designated the plasmid pGL3-Basic-APOprom1025.
T152 0-251 Sentence denotes For characterization of the A3G promoter, we cloned the 1025 bp located at position −959/+66 relative to the identified transcription start into the promoterless pGL3-Basic luciferase reporter plasmid and designated the plasmid pGL3-Basic-APOprom1025.

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T8008 0-3 IN denotes For
T8009 4-20 NN denotes characterization
T8010 21-23 IN denotes of
T8011 24-27 DT denotes the
T8012 28-31 NN denotes A3G
T8013 32-40 NN denotes promoter
T8014 40-41 -COMMA- denotes ,
T8015 42-44 PRP denotes we
T8016 45-51 VB denotes cloned
T8017 52-55 DT denotes the
T8018 56-63 NN denotes 1025 bp
T8019 64-71 JJ denotes located
T8020 72-74 IN denotes at
T8021 75-83 NN denotes position
T8022 84-92 CD denotes −959/+66
T8023 93-101 JJ denotes relative
T8024 102-104 TO denotes to
T8025 105-108 DT denotes the
T8026 109-119 VB denotes identified
T8027 120-133 NN denotes transcription
T8028 134-139 NN denotes start
T8029 140-144 IN denotes into
T8030 145-148 DT denotes the
T8031 149-161 JJ denotes promoterless
T8032 162-172 JJ denotes pGL3-Basic
T8033 173-183 NN denotes luciferase
T8034 184-192 NN denotes reporter
T8035 193-200 NN denotes plasmid
T8036 201-204 CC denotes and
T8037 205-215 VB denotes designated
T8038 216-219 DT denotes the
T8039 220-227 NN denotes plasmid
T8040 228-250 NN denotes pGL3-Basic-APOprom1025
R6570 T8009 T8008 arg2Of characterization,For
R6571 T8009 T8010 arg1Of characterization,of
R6572 T8013 T8010 arg2Of promoter,of
R6573 T8013 T8011 arg1Of promoter,the
R6574 T8013 T8012 arg1Of promoter,A3G
R6575 T8015 T8016 arg1Of we,cloned
R6576 T8015 T8037 arg2Of we,designated
R6577 T8016 T8036 arg1Of cloned,and
R6578 T8018 T8016 arg2Of 1025 bp,cloned
R6579 T8018 T8017 arg1Of 1025 bp,the
R6580 T8018 T8019 arg1Of 1025 bp,located
R6581 T8019 T8020 arg1Of located,at
R6582 T8021 T8020 arg2Of position,at
R6583 T8021 T8022 arg1Of position,−959/+66
R6584 T8021 T8024 arg1Of position,to
R6585 T8024 T8023 arg1Of to,relative
R6586 T8028 T8024 arg2Of start,to
R6587 T8028 T8025 arg1Of start,the
R6588 T8028 T8026 arg2Of start,identified
R6589 T8028 T8027 arg1Of start,transcription
R6590 T8028 T8029 arg1Of start,into
R6591 T8035 T8029 arg2Of plasmid,into
R6592 T8035 T8030 arg1Of plasmid,the
R6593 T8035 T8031 arg1Of plasmid,promoterless
R6594 T8035 T8032 arg1Of plasmid,pGL3-Basic
R6595 T8035 T8033 arg1Of plasmid,luciferase
R6596 T8035 T8034 arg1Of plasmid,reporter
R6597 T8036 T8008 arg1Of and,For
R6598 T8036 T8014 arg1Of and,","
R6599 T8037 T8036 arg2Of designated,and
R6600 T8040 T8037 arg3Of pGL3-Basic-APOprom1025,designated
R6601 T8040 T8038 arg1Of pGL3-Basic-APOprom1025,the
R6602 T8040 T8039 arg1Of pGL3-Basic-APOprom1025,plasmid

events-check-again

Id Subject Object Predicate Lexical cue
T8636 28-31 Protein denotes A3G
T8637 173-183 Protein denotes luciferase

bionlp-st-ge-2016-reference-tees

Id Subject Object Predicate Lexical cue
T8649 28-40 Protein denotes A3G promoter
T8650 162-192 Protein denotes pGL3-Basic luciferase reporter

bionlp-st-ge-2016-reference

Id Subject Object Predicate Lexical cue
T7959 28-31 Protein denotes A3G
T7960 173-183 Protein denotes luciferase

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T8250 28-31 Q9HC16 denotes A3G
T8251 93-101 Q04864 denotes relative
T8252 173-183 P08659 denotes luciferase