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PMC:1920263 / 20390-20663 JSONTXT

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test2

Id Subject Object Predicate Lexical cue
T18671 34-37 Protein denotes A3G
T18672 91-94 Protein denotes A3G

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T18725 10-11 CD denotes 5
T18726 11-12 SYM denotes ′
T18727 12-13 : denotes -
T18728 13-17 NN denotes RACE
T18729 18-26 NN denotes analysis
T18730 27-29 IN denotes of
T18731 30-33 DT denotes the
T18732 34-37 NNP denotes A3G
T18733 38-42 NNP denotes cDNA
T18734 42-43 . denotes .
T18735 44-51 NNP denotes Agarose
T18736 52-55 NN denotes gel
T18737 56-71 NN denotes electrophoresis
T18738 72-74 IN denotes of
T18739 75-79 NN denotes size
T18740 80-86 NN denotes marker
T18741 87-90 CC denotes and
T18742 91-94 CD denotes A3G
T18743 95-96 CD denotes 5
T18744 96-97 SYM denotes ′
T18745 97-98 : denotes -
T18746 98-102 NN denotes RACE
T18747 103-111 NNS denotes products
T18748 112-117 IN denotes after
T18749 118-124 JJ denotes nested
T18750 125-128 NNP denotes PCR
T18751 129-133 IN denotes with
T18752 134-140 NN denotes primer
T18753 141-155 NN denotes RACE-APO3Gnest
T18754 156-157 -LRB- denotes (
T18755 157-160 VB denotes see
T18756 161-167 NN denotes Figure
T18757 168-169 CD denotes 1
T18758 170-173 IN denotes for
T18759 174-180 JJR denotes primer
T18760 181-188 NNS denotes details
T18761 188-189 -RRB- denotes )
T18762 189-190 . denotes .
T18763 191-201 NNS denotes Arrowheads
T18764 202-210 VBP denotes indicate
T18765 211-214 DT denotes the
T18766 215-220 CD denotes three
T18767 221-230 VBG denotes resulting
T18768 231-234 NNP denotes DNA
T18769 235-240 NNS denotes bands
T18770 241-246 WDT denotes which
T18771 247-251 VBD denotes were
T18772 252-258 VBN denotes cloned
T18773 259-262 CC denotes and
T18774 263-272 VBN denotes sequenced
T18775 272-273 . denotes .
R15236 T18725 T18729 nummod 5,analysis
R15237 T18726 T18728 punct ′,RACE
R15238 T18727 T18728 punct -,RACE
R15239 T18728 T18729 compound RACE,analysis
R15240 T18729 T18729 ROOT analysis,analysis
R15241 T18730 T18729 prep of,analysis
R15242 T18731 T18733 det the,cDNA
R15243 T18732 T18733 compound A3G,cDNA
R15244 T18733 T18730 pobj cDNA,of
R15245 T18734 T18729 punct .,analysis
R15246 T18735 T18737 compound Agarose,electrophoresis
R15247 T18736 T18737 compound gel,electrophoresis
R15248 T18737 T18737 ROOT electrophoresis,electrophoresis
R15249 T18738 T18737 prep of,electrophoresis
R15250 T18739 T18740 compound size,marker
R15251 T18740 T18738 pobj marker,of
R15252 T18741 T18737 cc and,electrophoresis
R15253 T18742 T18747 nummod A3G,products
R15254 T18743 T18747 nummod 5,products
R15255 T18744 T18746 punct ′,RACE
R15256 T18745 T18746 punct -,RACE
R15257 T18746 T18747 compound RACE,products
R15258 T18747 T18737 conj products,electrophoresis
R15259 T18748 T18755 prep after,see
R15260 T18749 T18750 amod nested,PCR
R15261 T18750 T18748 pobj PCR,after
R15262 T18751 T18750 prep with,PCR
R15263 T18752 T18753 compound primer,RACE-APO3Gnest
R15264 T18753 T18751 pobj RACE-APO3Gnest,with
R15265 T18754 T18755 punct (,see
R15266 T18755 T18747 parataxis see,products
R15267 T18756 T18755 dobj Figure,see
R15268 T18757 T18756 nummod 1,Figure
R15269 T18758 T18756 prep for,Figure
R15270 T18759 T18760 amod primer,details
R15271 T18760 T18758 pobj details,for
R15272 T18761 T18755 punct ),see
R15273 T18762 T18747 punct .,products
R15274 T18763 T18764 nsubj Arrowheads,indicate
R15275 T18764 T18764 ROOT indicate,indicate
R15276 T18765 T18769 det the,bands
R15277 T18766 T18769 nummod three,bands
R15278 T18767 T18769 amod resulting,bands
R15279 T18768 T18769 compound DNA,bands
R15280 T18769 T18764 dobj bands,indicate
R15281 T18770 T18772 nsubjpass which,cloned
R15282 T18771 T18772 auxpass were,cloned
R15283 T18772 T18769 relcl cloned,bands
R15284 T18773 T18772 cc and,cloned
R15285 T18774 T18772 conj sequenced,cloned
R15286 T18775 T18764 punct .,indicate

sentences

Id Subject Object Predicate Lexical cue
T18675 10-43 Sentence denotes 5′-RACE analysis of the A3G cDNA.
T18676 44-190 Sentence denotes Agarose gel electrophoresis of size marker and A3G 5′-RACE products after nested PCR with primer RACE-APO3Gnest (see Figure 1 for primer details).
T18677 191-273 Sentence denotes Arrowheads indicate the three resulting DNA bands which were cloned and sequenced.
T147 0-9 Sentence denotes Figure 2.
T148 10-43 Sentence denotes 5′-RACE analysis of the A3G cDNA.
T149 44-190 Sentence denotes Agarose gel electrophoresis of size marker and A3G 5′-RACE products after nested PCR with primer RACE-APO3Gnest (see Figure 1 for primer details).
T150 191-273 Sentence denotes Arrowheads indicate the three resulting DNA bands which were cloned and sequenced.

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T18678 10-17 NN denotes 5′-RACE
T18679 18-26 NN denotes analysis
T18680 27-29 IN denotes of
T18681 30-33 DT denotes the
T18682 34-37 NN denotes A3G
T18683 38-42 NN denotes cDNA
T18684 44-51 NN denotes Agarose
T18685 52-55 NN denotes gel
T18686 56-71 NN denotes electrophoresis
T18687 72-74 IN denotes of
T18688 75-79 NN denotes size
T18689 80-86 NN denotes marker
T18690 87-90 CC denotes and
T18691 91-94 NN denotes A3G
T18692 95-102 NN denotes 5′-RACE
T18693 103-111 NN denotes products
T18694 112-117 IN denotes after
T18695 118-124 JJ denotes nested
T18696 125-128 NN denotes PCR
T18697 129-133 IN denotes with
T18698 134-140 NN denotes primer
T18699 141-155 NN denotes RACE-APO3Gnest
T18700 156-157 -LRB- denotes (
T18701 157-160 VB denotes see
T18702 161-167 NNP denotes Figure
T18703 168-169 CD denotes 1
T18704 170-173 IN denotes for
T18705 174-180 NN denotes primer
T18706 181-188 NN denotes details
T18707 188-189 -RRB- denotes )
T18708 191-201 NN denotes Arrowheads
T18709 202-210 VB denotes indicate
T18710 211-214 DT denotes the
T18711 215-220 CD denotes three
T18712 221-230 VB denotes resulting
T18713 231-234 NN denotes DNA
T18714 235-240 NN denotes bands
T18715 241-246 WDT denotes which
T18716 247-251 VB denotes were
T18717 252-258 VB denotes cloned
T18718 259-262 CC denotes and
T18719 263-272 VB denotes sequenced
R15195 T18679 T18678 arg1Of analysis,5′-RACE
R15196 T18679 T18680 arg1Of analysis,of
R15197 T18683 T18680 arg2Of cDNA,of
R15198 T18683 T18681 arg1Of cDNA,the
R15199 T18683 T18682 arg1Of cDNA,A3G
R15200 T18686 T18684 arg1Of electrophoresis,Agarose
R15201 T18686 T18685 arg1Of electrophoresis,gel
R15202 T18686 T18687 arg1Of electrophoresis,of
R15203 T18686 T18694 arg1Of electrophoresis,after
R15204 T18686 T18701 modOf electrophoresis,see
R15205 T18686 T18704 arg1Of electrophoresis,for
R15206 T18686 T18707 arg1Of electrophoresis,)
R15207 T18689 T18688 arg1Of marker,size
R15208 T18689 T18690 arg1Of marker,and
R15209 T18690 T18687 arg2Of and,of
R15210 T18693 T18690 arg2Of products,and
R15211 T18693 T18691 arg1Of products,A3G
R15212 T18693 T18692 arg1Of products,5′-RACE
R15213 T18696 T18694 arg2Of PCR,after
R15214 T18696 T18695 arg1Of PCR,nested
R15215 T18696 T18697 arg1Of PCR,with
R15216 T18699 T18697 arg2Of RACE-APO3Gnest,with
R15217 T18699 T18698 arg1Of RACE-APO3Gnest,primer
R15218 T18701 T18700 arg1Of see,(
R15219 T18702 T18701 arg2Of Figure,see
R15220 T18702 T18703 arg1Of Figure,1
R15221 T18706 T18704 arg2Of details,for
R15222 T18706 T18705 arg1Of details,primer
R15223 T18708 T18709 arg1Of Arrowheads,indicate
R15224 T18714 T18709 arg2Of bands,indicate
R15225 T18714 T18710 arg1Of bands,the
R15226 T18714 T18711 arg1Of bands,three
R15227 T18714 T18712 arg1Of bands,resulting
R15228 T18714 T18713 arg1Of bands,DNA
R15229 T18714 T18715 arg1Of bands,which
R15230 T18714 T18716 arg1Of bands,were
R15231 T18714 T18717 arg2Of bands,cloned
R15232 T18714 T18719 arg2Of bands,sequenced
R15233 T18717 T18718 arg1Of cloned,and
R15234 T18718 T18716 arg2Of and,were
R15235 T18719 T18718 arg2Of sequenced,and

events-check-again

Id Subject Object Predicate Lexical cue
T18786 34-37 Protein denotes A3G
T18787 91-94 Protein denotes A3G

bionlp-st-ge-2016-reference-tees

Id Subject Object Predicate Lexical cue
T18788 34-42 Protein denotes A3G cDNA

bionlp-st-ge-2016-reference

Id Subject Object Predicate Lexical cue
T18673 34-37 Protein denotes A3G
T18674 91-94 Protein denotes A3G

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T18720 34-37 Q9HC16 denotes A3G
T18721 91-94 Q9HC16 denotes A3G