
PMC:1920263 / 19635-20389
Annnotations
test2
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T18337 | 26-29 | Protein | denotes | A3G |
T18338 | 277-304 | Protein | denotes | transcriptional start sites |
T18339 | 430-440 | Protein | denotes | luciferase |
GO-MF
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T18632 | 376-383 | http://purl.obolibrary.org/obo/GO_0005488 | denotes | binding |
T18633 | 723-730 | http://purl.obolibrary.org/obo/GO_0005488 | denotes | binding |
T18634 | 576-578 | http://purl.obolibrary.org/obo/GO_0004839 | denotes | E1 |
T18635 | 583-585 | http://purl.obolibrary.org/obo/GO_0004842 | denotes | E2 |
T18636 | 583-585 | http://purl.obolibrary.org/obo/GO_0019787 | denotes | E2 |
T18637 | 583-585 | http://purl.obolibrary.org/obo/GO_0061631 | denotes | E2 |
T18638 | 583-585 | http://purl.obolibrary.org/obo/GO_0061650 | denotes | E2 |
T18639 | 583-585 | http://purl.obolibrary.org/obo/GO_0061651 | denotes | E2 |
T18640 | 583-585 | http://purl.obolibrary.org/obo/GO_0061652 | denotes | E2 |
T18641 | 583-585 | http://purl.obolibrary.org/obo/GO_0061653 | denotes | E2 |
T18642 | 583-585 | http://purl.obolibrary.org/obo/GO_0061654 | denotes | E2 |
T18643 | 583-585 | http://purl.obolibrary.org/obo/GO_0061655 | denotes | E2 |
T18644 | 583-585 | http://purl.obolibrary.org/obo/GO_0061656 | denotes | E2 |
T18645 | 583-585 | http://purl.obolibrary.org/obo/GO_0061657 | denotes | E2 |
T18646 | 583-585 | http://purl.obolibrary.org/obo/GO_0061658 | denotes | E2 |
GO-BP
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T18350 | 277-292 | http://purl.obolibrary.org/obo/GO_0006351 | denotes | transcriptional |
T18351 | 702-715 | http://purl.obolibrary.org/obo/GO_0006351 | denotes | transcription |
T18352 | 576-578 | http://purl.obolibrary.org/obo/GO_0004839 | denotes | E1 |
T18353 | 583-585 | http://purl.obolibrary.org/obo/GO_0004842 | denotes | E2 |
T18354 | 583-585 | http://purl.obolibrary.org/obo/GO_0019787 | denotes | E2 |
T18355 | 583-585 | http://purl.obolibrary.org/obo/GO_0061631 | denotes | E2 |
T18356 | 583-585 | http://purl.obolibrary.org/obo/GO_0061650 | denotes | E2 |
T18357 | 583-585 | http://purl.obolibrary.org/obo/GO_0061651 | denotes | E2 |
T18358 | 583-585 | http://purl.obolibrary.org/obo/GO_0061652 | denotes | E2 |
T18359 | 583-585 | http://purl.obolibrary.org/obo/GO_0061653 | denotes | E2 |
T18360 | 583-585 | http://purl.obolibrary.org/obo/GO_0061654 | denotes | E2 |
T18361 | 583-585 | http://purl.obolibrary.org/obo/GO_0061655 | denotes | E2 |
T18362 | 583-585 | http://purl.obolibrary.org/obo/GO_0061656 | denotes | E2 |
T18363 | 583-585 | http://purl.obolibrary.org/obo/GO_0061657 | denotes | E2 |
T18364 | 583-585 | http://purl.obolibrary.org/obo/GO_0061658 | denotes | E2 |
bionlp-st-ge-2016-spacy-parsed
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T18498 | 10-18 | NN | denotes | Sequence |
T18499 | 19-21 | IN | denotes | of |
T18500 | 22-25 | DT | denotes | the |
T18501 | 26-29 | NNP | denotes | A3G |
T18502 | 30-38 | NN | denotes | promoter |
T18503 | 39-42 | CC | denotes | and |
T18504 | 43-46 | DT | denotes | the |
T18505 | 47-57 | JJ | denotes | downstream |
T18506 | 58-64 | NN | denotes | region |
T18507 | 64-65 | . | denotes | . |
T18508 | 66-69 | DT | denotes | The |
T18509 | 70-75 | JJ | denotes | first |
T18510 | 76-80 | CD | denotes | 1000 |
T18511 | 81-83 | NN | denotes | bp |
T18512 | 84-92 | RB | denotes | upstream |
T18513 | 93-95 | IN | denotes | of |
T18514 | 96-99 | DT | denotes | the |
T18515 | 100-105 | JJ | denotes | major |
T18516 | 106-109 | NNP | denotes | TSS |
T18517 | 110-113 | VBP | denotes | are |
T18518 | 114-119 | VBN | denotes | shown |
T18519 | 120-122 | IN | denotes | in |
T18520 | 123-128 | JJR | denotes | lower |
T18521 | 129-133 | NN | denotes | case |
T18522 | 133-134 | , | denotes | , |
T18523 | 135-138 | DT | denotes | the |
T18524 | 139-144 | JJ | denotes | first |
T18525 | 145-148 | CD | denotes | 800 |
T18526 | 149-151 | NN | denotes | bp |
T18527 | 152-154 | IN | denotes | of |
T18528 | 155-158 | DT | denotes | the |
T18529 | 159-170 | VBN | denotes | transcribed |
T18530 | 171-179 | NN | denotes | sequence |
T18531 | 180-183 | VBP | denotes | are |
T18532 | 184-189 | VBN | denotes | shown |
T18533 | 190-192 | IN | denotes | in |
T18534 | 193-198 | JJ | denotes | upper |
T18535 | 199-203 | NN | denotes | case |
T18536 | 203-204 | . | denotes | . |
T18537 | 205-212 | NNS | denotes | Introns |
T18538 | 213-216 | VBP | denotes | are |
T18539 | 217-224 | VBN | denotes | removed |
T18540 | 224-225 | , | denotes | , |
T18541 | 226-229 | CC | denotes | but |
T18542 | 230-235 | PRP$ | denotes | their |
T18543 | 236-245 | NNS | denotes | positions |
T18544 | 246-249 | VBP | denotes | are |
T18545 | 250-259 | VBN | denotes | indicated |
T18546 | 259-260 | . | denotes | . |
T18547 | 261-267 | NNS | denotes | Arrows |
T18548 | 268-273 | VBP | denotes | refer |
T18549 | 274-276 | TO | denotes | to |
T18550 | 277-292 | JJ | denotes | transcriptional |
T18551 | 293-298 | NN | denotes | start |
T18552 | 299-304 | NNS | denotes | sites |
T18553 | 305-308 | CC | denotes | and |
T18554 | 309-314 | PRP$ | denotes | their |
T18555 | 315-323 | JJ | denotes | observed |
T18556 | 324-333 | NN | denotes | frequency |
T18557 | 334-336 | VBZ | denotes | is |
T18558 | 337-342 | VBN | denotes | given |
T18559 | 343-345 | IN | denotes | by |
T18560 | 346-349 | DT | denotes | the |
T18561 | 350-357 | NNS | denotes | numbers |
T18562 | 358-363 | IN | denotes | above |
T18563 | 363-364 | . | denotes | . |
T18564 | 365-368 | DT | denotes | The |
T18565 | 369-375 | NN | denotes | primer |
T18566 | 376-383 | JJ | denotes | binding |
T18567 | 384-389 | NNS | denotes | sites |
T18568 | 390-393 | IN | denotes | for |
T18569 | 394-395 | CD | denotes | 5 |
T18570 | 395-396 | SYM | denotes | ′ |
T18571 | 396-397 | : | denotes | - |
T18572 | 397-401 | NN | denotes | RACE |
T18573 | 402-410 | NN | denotes | analysis |
T18574 | 411-414 | CC | denotes | and |
T18575 | 415-422 | NN | denotes | cloning |
T18576 | 423-425 | IN | denotes | of |
T18577 | 426-429 | DT | denotes | the |
T18578 | 430-440 | NN | denotes | luciferase |
T18579 | 441-449 | NN | denotes | reporter |
T18580 | 450-460 | NNS | denotes | constructs |
T18581 | 461-464 | VBP | denotes | are |
T18582 | 465-475 | VBN | denotes | underlined |
T18583 | 476-479 | CC | denotes | and |
T18584 | 480-483 | DT | denotes | the |
T18585 | 484-489 | NNS | denotes | names |
T18586 | 490-492 | IN | denotes | of |
T18587 | 493-496 | DT | denotes | the |
T18588 | 497-504 | NNS | denotes | primers |
T18589 | 505-508 | VBP | denotes | are |
T18590 | 509-518 | VBN | denotes | annotated |
T18591 | 518-519 | . | denotes | . |
T18592 | 520-524 | NNP | denotes | Gray |
T18593 | 525-528 | CC | denotes | and |
T18594 | 529-534 | JJ | denotes | black |
T18595 | 535-545 | NNS | denotes | arrowheads |
T18596 | 546-552 | VBP | denotes | define |
T18597 | 553-556 | DT | denotes | the |
T18598 | 557-564 | NNS | denotes | regions |
T18599 | 565-575 | VBN | denotes | designated |
T18600 | 576-578 | CD | denotes | E1 |
T18601 | 579-582 | CC | denotes | and |
T18602 | 583-585 | CD | denotes | E2 |
T18603 | 586-591 | WDT | denotes | which |
T18604 | 592-596 | VBD | denotes | were |
T18605 | 597-603 | VBN | denotes | cloned |
T18606 | 604-608 | IN | denotes | into |
T18607 | 609-615 | NN | denotes | vector |
T18608 | 616-629 | NN | denotes | pGL3-Promoter |
T18609 | 630-633 | CC | denotes | and |
T18610 | 634-638 | VBN | denotes | used |
T18611 | 639-641 | IN | denotes | as |
T18612 | 642-646 | NNP | denotes | EMSA |
T18613 | 647-653 | NNS | denotes | probes |
T18614 | 653-654 | . | denotes | . |
T18615 | 655-658 | DT | denotes | The |
T18616 | 659-662 | NNP | denotes | ATG |
T18617 | 663-668 | VB | denotes | start |
T18618 | 669-674 | NN | denotes | codon |
T18619 | 675-678 | CC | denotes | and |
T18620 | 679-682 | DT | denotes | the |
T18621 | 683-693 | VBN | denotes | identified |
T18622 | 694-701 | JJ | denotes | Sp1/Sp3 |
T18623 | 702-715 | NN | denotes | transcription |
T18624 | 716-722 | NN | denotes | factor |
T18625 | 723-730 | JJ | denotes | binding |
T18626 | 731-735 | NN | denotes | site |
T18627 | 736-739 | VBP | denotes | are |
T18628 | 740-745 | VBN | denotes | shown |
T18629 | 746-748 | IN | denotes | in |
T18630 | 749-753 | JJ | denotes | bold |
T18631 | 753-754 | . | denotes | . |
R15061 | T18498 | T18498 | ROOT | Sequence,Sequence |
R15062 | T18499 | T18498 | prep | of,Sequence |
R15063 | T18500 | T18502 | det | the,promoter |
R15064 | T18501 | T18502 | compound | A3G,promoter |
R15065 | T18502 | T18499 | pobj | promoter,of |
R15066 | T18503 | T18502 | cc | and,promoter |
R15067 | T18504 | T18506 | det | the,region |
R15068 | T18505 | T18506 | amod | downstream,region |
R15069 | T18506 | T18502 | conj | region,promoter |
R15070 | T18507 | T18498 | punct | .,Sequence |
R15071 | T18508 | T18512 | det | The,upstream |
R15072 | T18509 | T18512 | amod | first,upstream |
R15073 | T18510 | T18511 | nummod | 1000,bp |
R15074 | T18511 | T18512 | compound | bp,upstream |
R15075 | T18512 | T18518 | nsubjpass | upstream,shown |
R15076 | T18513 | T18512 | prep | of,upstream |
R15077 | T18514 | T18516 | det | the,TSS |
R15078 | T18515 | T18516 | amod | major,TSS |
R15079 | T18516 | T18513 | pobj | TSS,of |
R15080 | T18517 | T18518 | auxpass | are,shown |
R15081 | T18518 | T18532 | ccomp | shown,shown |
R15082 | T18519 | T18518 | prep | in,shown |
R15083 | T18520 | T18521 | amod | lower,case |
R15084 | T18521 | T18519 | pobj | case,in |
R15085 | T18522 | T18532 | punct | ",",shown |
R15086 | T18523 | T18526 | det | the,bp |
R15087 | T18524 | T18526 | amod | first,bp |
R15088 | T18525 | T18526 | nummod | 800,bp |
R15089 | T18526 | T18532 | nsubjpass | bp,shown |
R15090 | T18527 | T18526 | prep | of,bp |
R15091 | T18528 | T18530 | det | the,sequence |
R15092 | T18529 | T18530 | amod | transcribed,sequence |
R15093 | T18530 | T18527 | pobj | sequence,of |
R15094 | T18531 | T18532 | auxpass | are,shown |
R15095 | T18532 | T18532 | ROOT | shown,shown |
R15096 | T18533 | T18532 | prep | in,shown |
R15097 | T18534 | T18535 | amod | upper,case |
R15098 | T18535 | T18533 | pobj | case,in |
R15099 | T18536 | T18532 | punct | .,shown |
R15100 | T18537 | T18539 | nsubjpass | Introns,removed |
R15101 | T18538 | T18539 | auxpass | are,removed |
R15102 | T18539 | T18539 | ROOT | removed,removed |
R15103 | T18540 | T18539 | punct | ",",removed |
R15104 | T18541 | T18539 | cc | but,removed |
R15105 | T18542 | T18543 | poss | their,positions |
R15106 | T18543 | T18545 | nsubjpass | positions,indicated |
R15107 | T18544 | T18545 | auxpass | are,indicated |
R15108 | T18545 | T18539 | conj | indicated,removed |
R15109 | T18546 | T18545 | punct | .,indicated |
R15110 | T18547 | T18548 | nsubj | Arrows,refer |
R15111 | T18548 | T18548 | ROOT | refer,refer |
R15112 | T18549 | T18548 | prep | to,refer |
R15113 | T18550 | T18552 | amod | transcriptional,sites |
R15114 | T18551 | T18552 | compound | start,sites |
R15115 | T18552 | T18549 | pobj | sites,to |
R15116 | T18553 | T18552 | cc | and,sites |
R15117 | T18554 | T18556 | poss | their,frequency |
R15118 | T18555 | T18556 | amod | observed,frequency |
R15119 | T18556 | T18558 | nsubjpass | frequency,given |
R15120 | T18557 | T18558 | auxpass | is,given |
R15121 | T18558 | T18548 | conj | given,refer |
R15122 | T18559 | T18558 | agent | by,given |
R15123 | T18560 | T18561 | det | the,numbers |
R15124 | T18561 | T18559 | pobj | numbers,by |
R15125 | T18562 | T18561 | advmod | above,numbers |
R15126 | T18563 | T18548 | punct | .,refer |
R15127 | T18564 | T18565 | det | The,primer |
R15128 | T18565 | T18582 | nsubjpass | primer,underlined |
R15129 | T18566 | T18567 | amod | binding,sites |
R15130 | T18567 | T18582 | nsubjpass | sites,underlined |
R15131 | T18568 | T18567 | prep | for,sites |
R15132 | T18569 | T18573 | nummod | 5,analysis |
R15133 | T18570 | T18572 | punct | ′,RACE |
R15134 | T18571 | T18572 | punct | -,RACE |
R15135 | T18572 | T18573 | compound | RACE,analysis |
R15136 | T18573 | T18568 | pobj | analysis,for |
R15137 | T18574 | T18573 | cc | and,analysis |
R15138 | T18575 | T18573 | conj | cloning,analysis |
R15139 | T18576 | T18573 | prep | of,analysis |
R15140 | T18577 | T18579 | det | the,reporter |
R15141 | T18578 | T18579 | compound | luciferase,reporter |
R15142 | T18579 | T18580 | compound | reporter,constructs |
R15143 | T18580 | T18576 | pobj | constructs,of |
R15144 | T18581 | T18582 | auxpass | are,underlined |
R15145 | T18582 | T18582 | ROOT | underlined,underlined |
R15146 | T18583 | T18582 | cc | and,underlined |
R15147 | T18584 | T18585 | det | the,names |
R15148 | T18585 | T18590 | nsubjpass | names,annotated |
R15149 | T18586 | T18585 | prep | of,names |
R15150 | T18587 | T18588 | det | the,primers |
R15151 | T18588 | T18586 | pobj | primers,of |
R15152 | T18589 | T18590 | auxpass | are,annotated |
R15153 | T18590 | T18582 | conj | annotated,underlined |
R15154 | T18591 | T18590 | punct | .,annotated |
R15155 | T18592 | T18596 | nsubj | Gray,define |
R15156 | T18593 | T18592 | cc | and,Gray |
R15157 | T18594 | T18595 | amod | black,arrowheads |
R15158 | T18595 | T18592 | conj | arrowheads,Gray |
R15159 | T18596 | T18596 | ROOT | define,define |
R15160 | T18597 | T18598 | det | the,regions |
R15161 | T18598 | T18599 | nsubj | regions,designated |
R15162 | T18599 | T18596 | ccomp | designated,define |
R15163 | T18600 | T18599 | dobj | E1,designated |
R15164 | T18601 | T18600 | cc | and,E1 |
R15165 | T18602 | T18600 | conj | E2,E1 |
R15166 | T18603 | T18605 | nsubjpass | which,cloned |
R15167 | T18604 | T18605 | auxpass | were,cloned |
R15168 | T18605 | T18602 | relcl | cloned,E2 |
R15169 | T18606 | T18605 | prep | into,cloned |
R15170 | T18607 | T18608 | compound | vector,pGL3-Promoter |
R15171 | T18608 | T18606 | pobj | pGL3-Promoter,into |
R15172 | T18609 | T18605 | cc | and,cloned |
R15173 | T18610 | T18605 | conj | used,cloned |
R15174 | T18611 | T18610 | prep | as,used |
R15175 | T18612 | T18613 | compound | EMSA,probes |
R15176 | T18613 | T18611 | pobj | probes,as |
R15177 | T18614 | T18596 | punct | .,define |
R15178 | T18615 | T18618 | det | The,codon |
R15179 | T18616 | T18617 | nsubj | ATG,start |
R15180 | T18617 | T18618 | compound | start,codon |
R15181 | T18618 | T18628 | nsubjpass | codon,shown |
R15182 | T18619 | T18618 | cc | and,codon |
R15183 | T18620 | T18624 | det | the,factor |
R15184 | T18621 | T18624 | amod | identified,factor |
R15185 | T18622 | T18624 | amod | Sp1/Sp3,factor |
R15186 | T18623 | T18624 | compound | transcription,factor |
R15187 | T18624 | T18626 | nmod | factor,site |
R15188 | T18625 | T18626 | amod | binding,site |
R15189 | T18626 | T18618 | conj | site,codon |
R15190 | T18627 | T18628 | auxpass | are,shown |
R15191 | T18628 | T18628 | ROOT | shown,shown |
R15192 | T18629 | T18628 | prep | in,shown |
R15193 | T18630 | T18629 | pobj | bold,in |
R15194 | T18631 | T18628 | punct | .,shown |
sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T18343 | 10-65 | Sentence | denotes | Sequence of the A3G promoter and the downstream region. |
T18344 | 66-204 | Sentence | denotes | The first 1000 bp upstream of the major TSS are shown in lower case, the first 800 bp of the transcribed sequence are shown in upper case. |
T18345 | 205-260 | Sentence | denotes | Introns are removed, but their positions are indicated. |
T18346 | 261-364 | Sentence | denotes | Arrows refer to transcriptional start sites and their observed frequency is given by the numbers above. |
T18347 | 365-519 | Sentence | denotes | The primer binding sites for 5′-RACE analysis and cloning of the luciferase reporter constructs are underlined and the names of the primers are annotated. |
T18348 | 520-654 | Sentence | denotes | Gray and black arrowheads define the regions designated E1 and E2 which were cloned into vector pGL3-Promoter and used as EMSA probes. |
T18349 | 655-754 | Sentence | denotes | The ATG start codon and the identified Sp1/Sp3 transcription factor binding site are shown in bold. |
T139 | 0-9 | Sentence | denotes | Figure 1. |
T140 | 10-65 | Sentence | denotes | Sequence of the A3G promoter and the downstream region. |
T141 | 66-204 | Sentence | denotes | The first 1000 bp upstream of the major TSS are shown in lower case, the first 800 bp of the transcribed sequence are shown in upper case. |
T142 | 205-260 | Sentence | denotes | Introns are removed, but their positions are indicated. |
T143 | 261-364 | Sentence | denotes | Arrows refer to transcriptional start sites and their observed frequency is given by the numbers above. |
T144 | 365-519 | Sentence | denotes | The primer binding sites for 5′-RACE analysis and cloning of the luciferase reporter constructs are underlined and the names of the primers are annotated. |
T145 | 520-654 | Sentence | denotes | Gray and black arrowheads define the regions designated E1 and E2 which were cloned into vector pGL3-Promoter and used as EMSA probes. |
T146 | 655-754 | Sentence | denotes | The ATG start codon and the identified Sp1/Sp3 transcription factor binding site are shown in bold. |
pmc-enju-pas
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T18441 | 476-479 | CC | denotes | and |
T18365 | 10-18 | NN | denotes | Sequence |
T18366 | 19-21 | IN | denotes | of |
T18367 | 22-25 | DT | denotes | the |
T18368 | 26-29 | NN | denotes | A3G |
T18369 | 30-38 | NN | denotes | promoter |
T18370 | 39-42 | CC | denotes | and |
T18371 | 43-46 | DT | denotes | the |
T18372 | 47-57 | JJ | denotes | downstream |
T18373 | 58-64 | NN | denotes | region |
T18374 | 66-69 | DT | denotes | The |
T18375 | 70-75 | JJ | denotes | first |
T18376 | 76-83 | NN | denotes | 1000 bp |
T18377 | 84-92 | RB | denotes | upstream |
T18378 | 93-95 | IN | denotes | of |
T18379 | 96-99 | DT | denotes | the |
T18380 | 100-105 | JJ | denotes | major |
T18381 | 106-109 | NN | denotes | TSS |
T18382 | 110-113 | VB | denotes | are |
T18383 | 114-119 | VB | denotes | shown |
T18384 | 120-122 | IN | denotes | in |
T18385 | 123-128 | JJ | denotes | lower |
T18386 | 129-133 | NN | denotes | case |
T18387 | 133-134 | -COMMA- | denotes | , |
T18388 | 135-138 | DT | denotes | the |
T18389 | 139-144 | JJ | denotes | first |
T18390 | 145-151 | NN | denotes | 800 bp |
T18391 | 152-154 | IN | denotes | of |
T18392 | 155-158 | DT | denotes | the |
T18393 | 159-170 | VB | denotes | transcribed |
T18394 | 171-179 | NN | denotes | sequence |
T18395 | 180-183 | VB | denotes | are |
T18396 | 184-189 | VB | denotes | shown |
T18397 | 190-192 | IN | denotes | in |
T18398 | 193-198 | JJ | denotes | upper |
T18399 | 199-203 | NN | denotes | case |
T18400 | 205-212 | NN | denotes | Introns |
T18401 | 213-216 | VB | denotes | are |
T18402 | 217-224 | VB | denotes | removed |
T18403 | 224-225 | -COMMA- | denotes | , |
T18404 | 226-229 | CC | denotes | but |
T18405 | 230-235 | PRP-DOLLAR- | denotes | their |
T18406 | 236-245 | NN | denotes | positions |
T18407 | 246-249 | VB | denotes | are |
T18408 | 250-259 | VB | denotes | indicated |
T18409 | 261-267 | NN | denotes | Arrows |
T18410 | 268-273 | VB | denotes | refer |
T18411 | 274-276 | TO | denotes | to |
T18412 | 277-292 | JJ | denotes | transcriptional |
T18413 | 293-298 | NN | denotes | start |
T18414 | 299-304 | NN | denotes | sites |
T18415 | 305-308 | CC | denotes | and |
T18416 | 309-314 | PRP-DOLLAR- | denotes | their |
T18417 | 315-323 | VB | denotes | observed |
T18418 | 324-333 | NN | denotes | frequency |
T18419 | 334-336 | VB | denotes | is |
T18420 | 337-342 | VB | denotes | given |
T18421 | 343-345 | IN | denotes | by |
T18422 | 346-349 | DT | denotes | the |
T18423 | 350-357 | NN | denotes | numbers |
T18424 | 358-363 | RB | denotes | above |
T18425 | 365-368 | DT | denotes | The |
T18426 | 369-375 | NN | denotes | primer |
T18427 | 376-383 | NN | denotes | binding |
T18428 | 384-389 | NN | denotes | sites |
T18429 | 390-393 | IN | denotes | for |
T18430 | 394-401 | NN | denotes | 5′-RACE |
T18431 | 402-410 | NN | denotes | analysis |
T18432 | 411-414 | CC | denotes | and |
T18433 | 415-422 | NN | denotes | cloning |
T18434 | 423-425 | IN | denotes | of |
T18435 | 426-429 | DT | denotes | the |
T18436 | 430-440 | NN | denotes | luciferase |
T18437 | 441-449 | NN | denotes | reporter |
T18438 | 450-460 | NN | denotes | constructs |
T18439 | 461-464 | VB | denotes | are |
T18440 | 465-475 | VB | denotes | underlined |
T18442 | 480-483 | DT | denotes | the |
T18443 | 484-489 | NN | denotes | names |
T18444 | 490-492 | IN | denotes | of |
T18445 | 493-496 | DT | denotes | the |
T18446 | 497-504 | NN | denotes | primers |
T18447 | 505-508 | VB | denotes | are |
T18448 | 509-518 | VB | denotes | annotated |
T18449 | 520-524 | NNP | denotes | Gray |
T18450 | 525-528 | CC | denotes | and |
T18451 | 529-534 | JJ | denotes | black |
T18452 | 535-545 | NN | denotes | arrowheads |
T18453 | 546-552 | VB | denotes | define |
T18454 | 553-556 | DT | denotes | the |
T18455 | 557-564 | NN | denotes | regions |
T18456 | 565-575 | VB | denotes | designated |
T18457 | 576-578 | NN | denotes | E1 |
T18458 | 579-582 | CC | denotes | and |
T18459 | 583-585 | NN | denotes | E2 |
T18460 | 586-591 | WDT | denotes | which |
T18461 | 592-596 | VB | denotes | were |
T18462 | 597-603 | VB | denotes | cloned |
T18463 | 604-608 | IN | denotes | into |
T18464 | 609-615 | NN | denotes | vector |
T18465 | 616-629 | NN | denotes | pGL3-Promoter |
T18466 | 630-633 | CC | denotes | and |
T18467 | 634-638 | VB | denotes | used |
T18468 | 639-641 | IN | denotes | as |
T18469 | 642-646 | NN | denotes | EMSA |
T18470 | 647-653 | NN | denotes | probes |
T18471 | 655-658 | DT | denotes | The |
T18472 | 659-662 | NN | denotes | ATG |
T18473 | 663-668 | NN | denotes | start |
T18474 | 669-674 | NN | denotes | codon |
T18475 | 675-678 | CC | denotes | and |
T18476 | 679-682 | DT | denotes | the |
T18477 | 683-693 | VB | denotes | identified |
T18478 | 694-701 | NN | denotes | Sp1/Sp3 |
T18479 | 702-715 | NN | denotes | transcription |
T18480 | 716-722 | NN | denotes | factor |
T18481 | 723-730 | NN | denotes | binding |
T18482 | 731-735 | NN | denotes | site |
T18483 | 736-739 | VB | denotes | are |
T18484 | 740-745 | VB | denotes | shown |
T18485 | 746-748 | IN | denotes | in |
T18486 | 749-753 | NN | denotes | bold |
R14936 | T18365 | T18366 | arg1Of | Sequence,of |
R14937 | T18365 | T18370 | arg1Of | Sequence,and |
R14938 | T18369 | T18366 | arg2Of | promoter,of |
R14939 | T18369 | T18367 | arg1Of | promoter,the |
R14940 | T18369 | T18368 | arg1Of | promoter,A3G |
R14941 | T18373 | T18370 | arg2Of | region,and |
R14942 | T18373 | T18371 | arg1Of | region,the |
R14943 | T18373 | T18372 | arg1Of | region,downstream |
R14944 | T18376 | T18374 | arg1Of | 1000 bp,The |
R14945 | T18376 | T18375 | arg1Of | 1000 bp,first |
R14946 | T18376 | T18377 | arg1Of | 1000 bp,upstream |
R14947 | T18376 | T18382 | arg1Of | 1000 bp,are |
R14948 | T18376 | T18383 | arg2Of | 1000 bp,shown |
R14949 | T18377 | T18378 | arg1Of | upstream,of |
R14950 | T18381 | T18378 | arg2Of | TSS,of |
R14951 | T18381 | T18379 | arg1Of | TSS,the |
R14952 | T18381 | T18380 | arg1Of | TSS,major |
R14953 | T18383 | T18382 | arg2Of | shown,are |
R14954 | T18383 | T18384 | arg1Of | shown,in |
R14955 | T18386 | T18384 | arg2Of | case,in |
R14956 | T18386 | T18385 | arg1Of | case,lower |
R14957 | T18390 | T18388 | arg1Of | 800 bp,the |
R14958 | T18390 | T18389 | arg1Of | 800 bp,first |
R14959 | T18390 | T18391 | arg1Of | 800 bp,of |
R14960 | T18390 | T18395 | arg1Of | 800 bp,are |
R14961 | T18390 | T18396 | arg2Of | 800 bp,shown |
R14962 | T18394 | T18391 | arg2Of | sequence,of |
R14963 | T18394 | T18392 | arg1Of | sequence,the |
R14964 | T18394 | T18393 | arg2Of | sequence,transcribed |
R14965 | T18396 | T18382 | modOf | shown,are |
R14966 | T18396 | T18387 | arg1Of | shown,"," |
R14967 | T18396 | T18395 | arg2Of | shown,are |
R14968 | T18396 | T18397 | arg1Of | shown,in |
R14969 | T18399 | T18397 | arg2Of | case,in |
R14970 | T18399 | T18398 | arg1Of | case,upper |
R14971 | T18400 | T18401 | arg1Of | Introns,are |
R14972 | T18400 | T18402 | arg2Of | Introns,removed |
R14973 | T18402 | T18401 | arg2Of | removed,are |
R14974 | T18402 | T18404 | arg1Of | removed,but |
R14975 | T18404 | T18403 | arg1Of | but,"," |
R14976 | T18406 | T18405 | arg1Of | positions,their |
R14977 | T18406 | T18407 | arg1Of | positions,are |
R14978 | T18406 | T18408 | arg2Of | positions,indicated |
R14979 | T18408 | T18404 | arg2Of | indicated,but |
R14980 | T18408 | T18407 | arg2Of | indicated,are |
R14981 | T18409 | T18410 | arg1Of | Arrows,refer |
R14982 | T18410 | T18411 | arg1Of | refer,to |
R14983 | T18410 | T18415 | arg1Of | refer,and |
R14984 | T18414 | T18411 | arg2Of | sites,to |
R14985 | T18414 | T18412 | arg1Of | sites,transcriptional |
R14986 | T18414 | T18413 | arg1Of | sites,start |
R14987 | T18418 | T18416 | arg1Of | frequency,their |
R14988 | T18418 | T18417 | arg2Of | frequency,observed |
R14989 | T18418 | T18419 | arg1Of | frequency,is |
R14990 | T18418 | T18420 | arg2Of | frequency,given |
R14991 | T18420 | T18415 | arg2Of | given,and |
R14992 | T18420 | T18419 | arg2Of | given,is |
R14993 | T18420 | T18424 | arg1Of | given,above |
R14994 | T18423 | T18420 | arg1Of | numbers,given |
R14995 | T18423 | T18421 | arg2Of | numbers,by |
R14996 | T18423 | T18422 | arg1Of | numbers,the |
R14997 | T18428 | T18425 | arg1Of | sites,The |
R14998 | T18428 | T18426 | arg1Of | sites,primer |
R14999 | T18428 | T18427 | arg1Of | sites,binding |
R15000 | T18428 | T18429 | arg1Of | sites,for |
R15001 | T18428 | T18439 | arg1Of | sites,are |
R15002 | T18428 | T18440 | arg2Of | sites,underlined |
R15003 | T18431 | T18430 | arg1Of | analysis,5′-RACE |
R15004 | T18431 | T18432 | arg1Of | analysis,and |
R15005 | T18432 | T18429 | arg2Of | and,for |
R15006 | T18432 | T18434 | arg1Of | and,of |
R15007 | T18433 | T18432 | arg2Of | cloning,and |
R15008 | T18438 | T18434 | arg2Of | constructs,of |
R15009 | T18438 | T18435 | arg1Of | constructs,the |
R15010 | T18438 | T18436 | arg1Of | constructs,luciferase |
R15011 | T18438 | T18437 | arg1Of | constructs,reporter |
R15012 | T18440 | T18439 | arg2Of | underlined,are |
R15013 | T18440 | T18441 | arg1Of | underlined,and |
R15014 | T18443 | T18442 | arg1Of | names,the |
R15015 | T18443 | T18444 | arg1Of | names,of |
R15016 | T18443 | T18447 | arg1Of | names,are |
R15017 | T18443 | T18448 | arg2Of | names,annotated |
R15018 | T18446 | T18444 | arg2Of | primers,of |
R15019 | T18446 | T18445 | arg1Of | primers,the |
R15020 | T18448 | T18441 | arg2Of | annotated,and |
R15021 | T18448 | T18447 | arg2Of | annotated,are |
R15022 | T18449 | T18450 | arg1Of | Gray,and |
R15023 | T18450 | T18453 | arg1Of | and,define |
R15024 | T18452 | T18450 | arg2Of | arrowheads,and |
R15025 | T18452 | T18451 | arg1Of | arrowheads,black |
R15026 | T18455 | T18453 | arg2Of | regions,define |
R15027 | T18455 | T18454 | arg1Of | regions,the |
R15028 | T18455 | T18456 | arg2Of | regions,designated |
R15029 | T18455 | T18460 | arg1Of | regions,which |
R15030 | T18455 | T18461 | arg1Of | regions,were |
R15031 | T18455 | T18462 | arg2Of | regions,cloned |
R15032 | T18455 | T18467 | arg2Of | regions,used |
R15033 | T18457 | T18458 | arg1Of | E1,and |
R15034 | T18458 | T18456 | arg3Of | and,designated |
R15035 | T18459 | T18458 | arg2Of | E2,and |
R15036 | T18462 | T18463 | arg1Of | cloned,into |
R15037 | T18462 | T18466 | arg1Of | cloned,and |
R15038 | T18465 | T18463 | arg2Of | pGL3-Promoter,into |
R15039 | T18465 | T18464 | arg1Of | pGL3-Promoter,vector |
R15040 | T18466 | T18461 | arg2Of | and,were |
R15041 | T18467 | T18466 | arg2Of | used,and |
R15042 | T18467 | T18468 | arg1Of | used,as |
R15043 | T18470 | T18468 | arg2Of | probes,as |
R15044 | T18470 | T18469 | arg1Of | probes,EMSA |
R15045 | T18474 | T18471 | arg1Of | codon,The |
R15046 | T18474 | T18472 | arg1Of | codon,ATG |
R15047 | T18474 | T18473 | arg1Of | codon,start |
R15048 | T18474 | T18475 | arg1Of | codon,and |
R15049 | T18475 | T18483 | arg1Of | and,are |
R15050 | T18475 | T18484 | arg2Of | and,shown |
R15051 | T18482 | T18475 | arg2Of | site,and |
R15052 | T18482 | T18476 | arg1Of | site,the |
R15053 | T18482 | T18477 | arg2Of | site,identified |
R15054 | T18482 | T18478 | arg1Of | site,Sp1/Sp3 |
R15055 | T18482 | T18479 | arg1Of | site,transcription |
R15056 | T18482 | T18480 | arg1Of | site,factor |
R15057 | T18482 | T18481 | arg1Of | site,binding |
R15058 | T18484 | T18483 | arg2Of | shown,are |
R15059 | T18484 | T18485 | arg1Of | shown,in |
R15060 | T18486 | T18485 | arg2Of | bold,in |
events-check-again
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T18662 | 26-29 | Protein | denotes | A3G |
T18663 | 277-304 | Protein | denotes | transcriptional start sites |
T18664 | 430-440 | Protein | denotes | luciferase |
bionlp-st-ge-2016-reference-tees
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T18665 | 26-38 | Protein | denotes | A3G promoter |
T18666 | 430-460 | Protein | denotes | luciferase reporter constructs |
T18667 | 694-697 | Protein | denotes | Sp1 |
T18668 | 698-701 | Protein | denotes | Sp3 |
bionlp-st-ge-2016-reference
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T18340 | 26-29 | Protein | denotes | A3G |
T18341 | 277-304 | Protein | denotes | transcriptional start sites |
T18342 | 430-440 | Protein | denotes | luciferase |
bionlp-st-ge-2016-uniprot
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T18487 | 26-29 | Q9HC16 | denotes | A3G |
T18488 | 430-440 | P08659 | denotes | luciferase |
T18489 | 694-697 | P08047 | denotes | Sp1 |
T18490 | 698-701 | Q02447 | denotes | Sp3 |