
PMC:1920263 / 13744-14048
Annnotations
test2
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T4954 | 90-93 | Protein | denotes | Sp1 |
T4955 | 181-184 | Protein | denotes | Sp1 |
bionlp-st-ge-2016-spacy-parsed
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T5553 | 0-4 | NNP | denotes | EMSA |
T5554 | 5-11 | NNS | denotes | probes |
T5555 | 12-16 | VBD | denotes | were |
T5556 | 17-26 | VBN | denotes | generated |
T5557 | 27-29 | IN | denotes | by |
T5558 | 30-39 | VBG | denotes | annealing |
T5559 | 40-43 | DT | denotes | the |
T5560 | 44-53 | VBG | denotes | following |
T5561 | 54-67 | JJ | denotes | complementary |
T5562 | 68-84 | NNS | denotes | oligonucleotides |
T5563 | 84-85 | : | denotes | : |
T5564 | 86-93 | JJ | denotes | APO-Sp1 |
T5565 | 93-94 | NN | denotes | / |
T5566 | 94-95 | CD | denotes | 3 |
T5567 | 95-96 | , | denotes | , |
T5568 | 97-98 | CD | denotes | 5 |
T5569 | 98-99 | SYM | denotes | ′ |
T5570 | 99-100 | : | denotes | - |
T5571 | 101-133 | NN | denotes | CCAGCTGGGCGGGACCACCAGGGGAGGGGC-3 |
T5572 | 133-134 | NN | denotes | ′ |
T5573 | 135-138 | CC | denotes | and |
T5574 | 139-140 | CD | denotes | 5 |
T5575 | 140-141 | SYM | denotes | ′ |
T5576 | 141-142 | : | denotes | - |
T5577 | 142-174 | NN | denotes | GCCCCTCCCCTGGTGGTCCCGCCCAGCTGG-3 |
T5578 | 174-175 | NN | denotes | ′ |
T5579 | 175-176 | : | denotes | ; |
T5580 | 177-184 | NNP | denotes | APO-Sp1 |
T5581 | 184-185 | NNP | denotes | / |
T5582 | 185-189 | CD | denotes | 3mut |
T5583 | 189-190 | , | denotes | , |
T5584 | 191-192 | CD | denotes | 5 |
T5585 | 192-193 | SYM | denotes | ′ |
T5586 | 193-194 | : | denotes | - |
T5587 | 195-227 | NN | denotes | CCAGCTGTTCGGGACCACCAGGGGAGGGGC-3 |
T5588 | 227-228 | NN | denotes | ′ |
T5589 | 229-232 | CC | denotes | and |
T5590 | 233-234 | CD | denotes | 5 |
T5591 | 234-235 | SYM | denotes | ′ |
T5592 | 235-236 | : | denotes | - |
T5593 | 237-269 | NN | denotes | GCCCCTCCCCTGGTGGTCCCGAACAGCTGG-3 |
T5594 | 269-270 | NN | denotes | ′ |
T5595 | 271-280 | VBG | denotes | according |
T5596 | 281-283 | TO | denotes | to |
T5597 | 284-292 | JJ | denotes | standard |
T5598 | 293-303 | NNS | denotes | procedures |
T5599 | 303-304 | . | denotes | . |
R4618 | T5553 | T5554 | compound | EMSA,probes |
R4619 | T5554 | T5556 | nsubjpass | probes,generated |
R4620 | T5555 | T5556 | auxpass | were,generated |
R4621 | T5556 | T5556 | ROOT | generated,generated |
R4622 | T5557 | T5556 | prep | by,generated |
R4623 | T5558 | T5557 | pcomp | annealing,by |
R4624 | T5559 | T5562 | det | the,oligonucleotides |
R4625 | T5560 | T5562 | amod | following,oligonucleotides |
R4626 | T5561 | T5562 | amod | complementary,oligonucleotides |
R4627 | T5562 | T5558 | dobj | oligonucleotides,annealing |
R4628 | T5563 | T5562 | punct | :,oligonucleotides |
R4629 | T5564 | T5565 | compound | APO-Sp1,/ |
R4630 | T5565 | T5562 | appos | /,oligonucleotides |
R4631 | T5566 | T5565 | nummod | 3,/ |
R4632 | T5567 | T5565 | punct | ",",/ |
R4633 | T5568 | T5572 | nummod | 5,′ |
R4634 | T5569 | T5571 | punct | ′,CCAGCTGGGCGGGACCACCAGGGGAGGGGC-3 |
R4635 | T5570 | T5571 | punct | -,CCAGCTGGGCGGGACCACCAGGGGAGGGGC-3 |
R4636 | T5571 | T5572 | compound | CCAGCTGGGCGGGACCACCAGGGGAGGGGC-3,′ |
R4637 | T5572 | T5565 | appos | ′,/ |
R4638 | T5573 | T5572 | cc | and,′ |
R4639 | T5574 | T5577 | nummod | 5,GCCCCTCCCCTGGTGGTCCCGCCCAGCTGG-3 |
R4640 | T5575 | T5577 | punct | ′,GCCCCTCCCCTGGTGGTCCCGCCCAGCTGG-3 |
R4641 | T5576 | T5577 | punct | -,GCCCCTCCCCTGGTGGTCCCGCCCAGCTGG-3 |
R4642 | T5577 | T5578 | compound | GCCCCTCCCCTGGTGGTCCCGCCCAGCTGG-3,′ |
R4643 | T5578 | T5572 | conj | ′,′ |
R4644 | T5579 | T5565 | punct | ;,/ |
R4645 | T5580 | T5581 | compound | APO-Sp1,/ |
R4646 | T5581 | T5595 | nsubj | /,according |
R4647 | T5582 | T5581 | nummod | 3mut,/ |
R4648 | T5583 | T5581 | punct | ",",/ |
R4649 | T5584 | T5588 | nummod | 5,′ |
R4650 | T5585 | T5587 | punct | ′,CCAGCTGTTCGGGACCACCAGGGGAGGGGC-3 |
R4651 | T5586 | T5587 | punct | -,CCAGCTGTTCGGGACCACCAGGGGAGGGGC-3 |
R4652 | T5587 | T5588 | compound | CCAGCTGTTCGGGACCACCAGGGGAGGGGC-3,′ |
R4653 | T5588 | T5581 | appos | ′,/ |
R4654 | T5589 | T5588 | cc | and,′ |
R4655 | T5590 | T5593 | nummod | 5,GCCCCTCCCCTGGTGGTCCCGAACAGCTGG-3 |
R4656 | T5591 | T5593 | punct | ′,GCCCCTCCCCTGGTGGTCCCGAACAGCTGG-3 |
R4657 | T5592 | T5593 | punct | -,GCCCCTCCCCTGGTGGTCCCGAACAGCTGG-3 |
R4658 | T5593 | T5594 | compound | GCCCCTCCCCTGGTGGTCCCGAACAGCTGG-3,′ |
R4661 | T5596 | T5595 | prep | to,according |
R4662 | T5597 | T5598 | amod | standard,procedures |
R4663 | T5598 | T5596 | pobj | procedures,to |
R4664 | T5599 | T5556 | punct | .,generated |
R4659 | T5594 | T5588 | conj | ′,′ |
R4660 | T5595 | T5556 | prep | according,generated |
sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T4978 | 0-304 | Sentence | denotes | EMSA probes were generated by annealing the following complementary oligonucleotides: APO-Sp1/3, 5′- CCAGCTGGGCGGGACCACCAGGGGAGGGGC-3′ and 5′-GCCCCTCCCCTGGTGGTCCCGCCCAGCTGG-3′; APO-Sp1/3mut, 5′- CCAGCTGTTCGGGACCACCAGGGGAGGGGC-3′ and 5′- GCCCCTCCCCTGGTGGTCCCGAACAGCTGG-3′ according to standard procedures. |
T90 | 0-304 | Sentence | denotes | EMSA probes were generated by annealing the following complementary oligonucleotides: APO-Sp1/3, 5′- CCAGCTGGGCGGGACCACCAGGGGAGGGGC-3′ and 5′-GCCCCTCCCCTGGTGGTCCCGCCCAGCTGG-3′; APO-Sp1/3mut, 5′- CCAGCTGTTCGGGACCACCAGGGGAGGGGC-3′ and 5′- GCCCCTCCCCTGGTGGTCCCGAACAGCTGG-3′ according to standard procedures. |
pmc-enju-pas
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T5120 | 0-4 | NN | denotes | EMSA |
T5121 | 5-11 | NN | denotes | probes |
T5122 | 12-16 | VB | denotes | were |
T5123 | 17-26 | VB | denotes | generated |
T5124 | 27-29 | IN | denotes | by |
T5125 | 30-39 | VB | denotes | annealing |
T5126 | 40-43 | DT | denotes | the |
T5127 | 44-53 | VB | denotes | following |
T5128 | 54-67 | JJ | denotes | complementary |
T5129 | 68-84 | NN | denotes | oligonucleotides |
T5130 | 84-85 | -COLON- | denotes | : |
T5131 | 86-95 | NN | denotes | APO-Sp1/3 |
T5132 | 95-96 | -COMMA- | denotes | , |
T5133 | 97-100 | JJ | denotes | 5′- |
T5134 | 101-134 | NN | denotes | CCAGCTGGGCGGGACCACCAGGGGAGGGGC-3′ |
T5135 | 135-138 | CC | denotes | and |
T5136 | 139-175 | NN | denotes | 5′-GCCCCTCCCCTGGTGGTCCCGCCCAGCTGG-3′ |
T5137 | 175-176 | -COLON- | denotes | ; |
T5138 | 177-189 | NN | denotes | APO-Sp1/3mut |
T5139 | 189-190 | -COMMA- | denotes | , |
T5140 | 191-194 | JJ | denotes | 5′- |
T5141 | 195-228 | NN | denotes | CCAGCTGTTCGGGACCACCAGGGGAGGGGC-3′ |
T5142 | 229-232 | CC | denotes | and |
T5143 | 233-236 | CD | denotes | 5′- |
T5144 | 237-270 | NN | denotes | GCCCCTCCCCTGGTGGTCCCGAACAGCTGG-3′ |
T5145 | 271-280 | VB | denotes | according |
T5146 | 281-283 | TO | denotes | to |
T5147 | 284-292 | JJ | denotes | standard |
T5148 | 293-303 | NN | denotes | procedures |
R4197 | T5121 | T5120 | arg1Of | probes,EMSA |
R4198 | T5121 | T5122 | arg1Of | probes,were |
R4199 | T5121 | T5123 | arg2Of | probes,generated |
R4200 | T5123 | T5122 | arg2Of | generated,were |
R4201 | T5123 | T5124 | arg1Of | generated,by |
R4202 | T5123 | T5130 | arg1Of | generated,: |
R4203 | T5123 | T5131 | arg1Of | generated,APO-Sp1/3 |
R4204 | T5123 | T5145 | arg1Of | generated,according |
R4205 | T5125 | T5124 | arg2Of | annealing,by |
R4206 | T5129 | T5125 | arg2Of | oligonucleotides,annealing |
R4207 | T5129 | T5126 | arg1Of | oligonucleotides,the |
R4208 | T5129 | T5127 | arg1Of | oligonucleotides,following |
R4209 | T5129 | T5128 | arg1Of | oligonucleotides,complementary |
R4210 | T5131 | T5132 | arg1Of | APO-Sp1/3,"," |
R4211 | T5131 | T5139 | arg1Of | APO-Sp1/3,"," |
R4212 | T5134 | T5133 | arg1Of | CCAGCTGGGCGGGACCACCAGGGGAGGGGC-3′,5′- |
R4213 | T5134 | T5135 | arg1Of | CCAGCTGGGCGGGACCACCAGGGGAGGGGC-3′,and |
R4214 | T5135 | T5132 | arg2Of | and,"," |
R4215 | T5136 | T5137 | arg1Of | 5′-GCCCCTCCCCTGGTGGTCCCGCCCAGCTGG-3′,; |
R4216 | T5137 | T5135 | arg2Of | ;,and |
R4217 | T5138 | T5137 | arg2Of | APO-Sp1/3mut,; |
R4218 | T5140 | T5141 | arg1Of | 5′-,CCAGCTGTTCGGGACCACCAGGGGAGGGGC-3′ |
R4219 | T5140 | T5142 | arg1Of | 5′-,and |
R4220 | T5143 | T5142 | arg2Of | 5′-,and |
R4221 | T5144 | T5139 | arg2Of | GCCCCTCCCCTGGTGGTCCCGAACAGCTGG-3′,"," |
R4222 | T5144 | T5140 | arg1Of | GCCCCTCCCCTGGTGGTCCCGAACAGCTGG-3′,5′- |
R4223 | T5144 | T5143 | arg1Of | GCCCCTCCCCTGGTGGTCCCGAACAGCTGG-3′,5′- |
R4224 | T5146 | T5145 | arg2Of | to,according |
R4225 | T5148 | T5146 | arg2Of | procedures,to |
R4226 | T5148 | T5147 | arg1Of | procedures,standard |
events-check-again
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T5903 | 90-93 | Protein | denotes | Sp1 |
T5904 | 181-184 | Protein | denotes | Sp1 |
bionlp-st-ge-2016-reference-tees
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T5912 | 86-89 | Protein | denotes | APO |
T5913 | 90-93 | Protein | denotes | Sp1 |
T5914 | 177-180 | Protein | denotes | APO |
T5915 | 181-184 | Protein | denotes | Sp1 |
bionlp-st-ge-2016-reference
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T4964 | 90-93 | Protein | denotes | Sp1 |
T4965 | 181-184 | Protein | denotes | Sp1 |
bionlp-st-ge-2016-uniprot
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T5370 | 90-93 | P08047 | denotes | Sp1 |
T5371 | 181-184 | P08047 | denotes | Sp1 |